Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.02□□□□□ -2.41
SDC3O75056 RPL39P34-201ENST00000477141 156 ntBASIC-0.02□□□□□ -2.41
SDC3O75056 RNU7-161P-201ENST00000517289 62 ntBASIC-0.02□□□□□ -2.41
SDC3O75056 MIR4743-201ENST00000584576 69 ntBASIC-0.02□□□□□ -2.41
SDC3O75056 AL162376.1-201ENST00000624117 175 ntBASIC-0.02□□□□□ -2.41
SDC3O75056 RNA5SP403-201ENST00000363598 108 ntBASIC-0.03□□□□□ -2.41
SDC3O75056 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.03□□□□□ -2.41
SDC3O75056 MIR593-201ENST00000384856 100 ntBASIC-0.03□□□□□ -2.41
SDC3O75056 MIR206-201ENST00000384872 86 ntBASIC-0.03□□□□□ -2.41
SDC3O75056 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.03□□□□□ -2.41
SDC3O75056 SNORD37.2-201ENST00000391075 66 ntBASIC-0.03□□□□□ -2.41
SDC3O75056 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.03□□□□□ -2.41
SDC3O75056 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.03□□□□□ -2.41
SDC3O75056 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.03□□□□□ -2.41
SDC3O75056 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.03□□□□□ -2.41
SDC3O75056 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
SDC3O75056 SNORA70.25-201ENST00000612741 95 ntBASIC-0.03□□□□□ -2.41
SDC3O75056 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.04□□□□□ -2.42
SDC3O75056 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.04□□□□□ -2.42
SDC3O75056 RNU6-309P-201ENST00000364573 106 ntBASIC-0.04□□□□□ -2.42
SDC3O75056 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.04□□□□□ -2.42
SDC3O75056 RNU6-449P-201ENST00000383914 107 ntBASIC-0.04□□□□□ -2.42
SDC3O75056 RNU6-35P-201ENST00000384530 107 ntBASIC-0.04□□□□□ -2.42
SDC3O75056 MIR610-201ENST00000385139 96 ntBASIC-0.04□□□□□ -2.42
SDC3O75056 SNORD77B-201ENST00000391112 67 ntBASIC-0.04□□□□□ -2.42
SDC3O75056 RNU7-48P-201ENST00000458875 63 ntBASIC-0.04□□□□□ -2.42
SDC3O75056 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.04□□□□□ -2.42
SDC3O75056 AC141557.1-201ENST00000540982 400 ntBASIC-0.04□□□□□ -2.42
SDC3O75056 MIR4500-201ENST00000579472 76 ntBASIC-0.04□□□□□ -2.42
SDC3O75056 MIR5706-201ENST00000579841 80 ntBASIC-0.04□□□□□ -2.42
SDC3O75056 AC141273.2-201ENST00000618989 130 ntBASIC-0.04□□□□□ -2.42
SDC3O75056 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.05□□□□□ -2.42
SDC3O75056 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.05□□□□□ -2.42
SDC3O75056 SNORD41.1-201ENST00000391000 69 ntBASIC-0.05□□□□□ -2.42
SDC3O75056 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.05□□□□□ -2.42
SDC3O75056 BX276092.1-201ENST00000427368 251 ntBASIC-0.05□□□□□ -2.42
SDC3O75056 TRAJ51-201ENST00000504127 63 ntBASIC-0.05□□□□□ -2.42
SDC3O75056 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.05□□□□□ -2.42
SDC3O75056 RNU6-782P-201ENST00000516852 104 ntBASIC-0.05□□□□□ -2.42
SDC3O75056 MIR635-201ENST00000384830 98 ntBASIC-0.06□□□□□ -2.42
SDC3O75056 MIR145-201ENST00000384967 88 ntBASIC-0.06□□□□□ -2.42
SDC3O75056 MIR548I2-201ENST00000408348 149 ntBASIC-0.06□□□□□ -2.42
SDC3O75056 RNY4P20-201ENST00000516678 93 ntBASIC-0.06□□□□□ -2.42
SDC3O75056 AP002392.1-201ENST00000537692 208 ntBASIC-0.06□□□□□ -2.42
SDC3O75056 AC108081.1-201ENST00000604358 221 ntBASIC-0.06□□□□□ -2.42
SDC3O75056 AP001362.1-201ENST00000625165 124 ntBASIC-0.06□□□□□ -2.42
SDC3O75056 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.07□□□□□ -2.42
SDC3O75056 MIR599-201ENST00000385069 95 ntBASIC-0.07□□□□□ -2.42
SDC3O75056 MIR519A1-201ENST00000385257 85 ntBASIC-0.07□□□□□ -2.42
SDC3O75056 MIR501-201ENST00000390204 84 ntBASIC-0.07□□□□□ -2.42
SDC3O75056 MIR892B-201ENST00000401279 77 ntBASIC-0.07□□□□□ -2.42
SDC3O75056 MIR548H2-201ENST00000408874 88 ntBASIC-0.07□□□□□ -2.42
SDC3O75056 AC097635.1-201ENST00000450678 155 ntBASIC-0.07□□□□□ -2.42
SDC3O75056 RNU7-120P-201ENST00000459334 63 ntBASIC-0.07□□□□□ -2.42
SDC3O75056 RNU7-2P-201ENST00000516096 62 ntBASIC-0.07□□□□□ -2.42
SDC3O75056 RNA5SP395-201ENST00000516567 118 ntBASIC-0.07□□□□□ -2.42
SDC3O75056 MIR4802-201ENST00000581881 80 ntBASIC-0.07□□□□□ -2.42
SDC3O75056 AL137067.1-201ENST00000615933 120 ntBASIC-0.07□□□□□ -2.42
SDC3O75056 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.08□□□□□ -2.42
SDC3O75056 RNU6-616P-201ENST00000384353 107 ntBASIC-0.08□□□□□ -2.42
SDC3O75056 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
SDC3O75056 RNU6-269P-201ENST00000391077 97 ntBASIC-0.08□□□□□ -2.42
SDC3O75056 U7.6-201ENST00000610841 64 ntBASIC-0.08□□□□□ -2.42
SDC3O75056 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.09□□□□□ -2.42
SDC3O75056 MT-TG-201ENST00000387429 68 ntBASIC-0.09□□□□□ -2.42
SDC3O75056 MIR4636-201ENST00000582271 80 ntBASIC-0.09□□□□□ -2.42
SDC3O75056 AC099654.10-201ENST00000640395 161 ntBASIC-0.09□□□□□ -2.42
SDC3O75056 AC073869.9-201ENST00000641610 120 ntBASIC-0.09□□□□□ -2.42
SDC3O75056 RNU6-200P-201ENST00000364743 107 ntBASIC-0.1□□□□□ -2.43
SDC3O75056 RNU6-865P-201ENST00000364772 107 ntBASIC-0.1□□□□□ -2.43
SDC3O75056 SNORD115-35-201ENST00000365122 82 ntBASIC-0.1□□□□□ -2.43
SDC3O75056 RNU4-11P-201ENST00000365287 132 ntBASIC-0.1□□□□□ -2.43
SDC3O75056 RNU6-929P-201ENST00000384429 107 ntBASIC-0.1□□□□□ -2.43
SDC3O75056 RNU6-861P-201ENST00000516745 106 ntBASIC-0.1□□□□□ -2.43
SDC3O75056 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.1□□□□□ -2.43
SDC3O75056 MIR548AD-201ENST00000584780 82 ntBASIC-0.1□□□□□ -2.43
SDC3O75056 MIR376B-201ENST00000614515 100 ntBASIC-0.1□□□□□ -2.43
SDC3O75056 RNU6-161P-201ENST00000363051 106 ntBASIC-0.11□□□□□ -2.43
SDC3O75056 RNU6-379P-201ENST00000363813 104 ntBASIC-0.11□□□□□ -2.43
SDC3O75056 RNU6-682P-201ENST00000363843 106 ntBASIC-0.11□□□□□ -2.43
SDC3O75056 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.11□□□□□ -2.43
SDC3O75056 RNU6-652P-201ENST00000365488 107 ntBASIC-0.11□□□□□ -2.43
SDC3O75056 RNU7-195P-201ENST00000458793 62 ntBASIC-0.11□□□□□ -2.43
SDC3O75056 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.11□□□□□ -2.43
SDC3O75056 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.11□□□□□ -2.43
SDC3O75056 uc_338.28-201ENST00000612082 187 ntBASIC-0.11□□□□□ -2.43
SDC3O75056 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.12□□□□□ -2.43
SDC3O75056 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.12□□□□□ -2.43
SDC3O75056 RNU6-460P-201ENST00000391158 108 ntBASIC-0.12□□□□□ -2.43
SDC3O75056 SNORD63B-201ENST00000411005 70 ntBASIC-0.12□□□□□ -2.43
SDC3O75056 RNA5SP476-201ENST00000516613 103 ntBASIC-0.12□□□□□ -2.43
SDC3O75056 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.13□□□□□ -2.43
SDC3O75056 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.13□□□□□ -2.43
SDC3O75056 RNU6-756P-201ENST00000383997 107 ntBASIC-0.13□□□□□ -2.43
SDC3O75056 RNU6V-201ENST00000384105 107 ntBASIC-0.13□□□□□ -2.43
SDC3O75056 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.13□□□□□ -2.43
SDC3O75056 RNA5SP163-201ENST00000410304 99 ntBASIC-0.13□□□□□ -2.43
SDC3O75056 RNU7-197P-201ENST00000458836 62 ntBASIC-0.13□□□□□ -2.43
SDC3O75056 RNA5SP484-201ENST00000458857 111 ntBASIC-0.13□□□□□ -2.43
SDC3O75056 AC074198.2-201ENST00000508153 258 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms