Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-570P-201ENST00000517051 105 ntBASIC-0.87□□□□□ -2.55
SHOX2O60902 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.87□□□□□ -2.55
SHOX2O60902 AL359881.1-201ENST00000602916 267 ntBASIC-0.87□□□□□ -2.55
SHOX2O60902 AC132825.6-201ENST00000638861 357 ntBASIC-0.87□□□□□ -2.55
SHOX2O60902 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 RNU6-290P-201ENST00000365212 101 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 SNORD115-46-201ENST00000390982 71 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 AC093423.1-201ENST00000440817 142 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 SNRPGP8-201ENST00000454064 226 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 RNU6-983P-201ENST00000516004 103 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 SNORD22.1-201ENST00000516331 125 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 SNORD67.1-201ENST00000516618 108 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.88□□□□□ -2.55
SHOX2O60902 MTND5P40-201ENST00000559945 246 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 MIR548AE1-201ENST00000583292 70 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 AL365205.2-201ENST00000594586 68 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 AL008718.3-201ENST00000610217 321 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 AC011603.4-201ENST00000611325 277 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 uc_338.10-201ENST00000621872 182 ntBASIC-0.88□□□□□ -2.55
SHOX2O60902 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.89□□□□□ -2.55
SHOX2O60902 SNORD114-29-201ENST00000364819 70 ntBASIC-0.89□□□□□ -2.55
SHOX2O60902 RNU6-326P-201ENST00000365480 107 ntBASIC-0.89□□□□□ -2.55
SHOX2O60902 SNORA63.7-201ENST00000365579 123 ntBASIC-0.89□□□□□ -2.55
SHOX2O60902 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.89□□□□□ -2.55
SHOX2O60902 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.89□□□□□ -2.55
SHOX2O60902 AC022137.1-201ENST00000483735 151 ntBASIC-0.89□□□□□ -2.55
SHOX2O60902 AC069503.3-201ENST00000618674 145 ntBASIC-0.89□□□□□ -2.55
SHOX2O60902 AC104985.2-201ENST00000620598 500 ntBASIC-0.89□□□□□ -2.55
SHOX2O60902 AC073869.6-201ENST00000640656 341 ntBASIC-0.89□□□□□ -2.55
SHOX2O60902 RNY1P11-201ENST00000363759 113 ntBASIC-0.9□□□□□ -2.55
SHOX2O60902 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.9□□□□□ -2.55
SHOX2O60902 RNU6-312P-201ENST00000364629 107 ntBASIC-0.9□□□□□ -2.55
SHOX2O60902 RNU6-973P-201ENST00000364690 107 ntBASIC-0.9□□□□□ -2.55
SHOX2O60902 RNU6-662P-201ENST00000384253 104 ntBASIC-0.9□□□□□ -2.55
SHOX2O60902 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.9□□□□□ -2.55
SHOX2O60902 AC016907.1-201ENST00000419483 435 ntBASIC-0.9□□□□□ -2.55
SHOX2O60902 FGF7P6-202ENST00000451282 293 ntBASIC-0.9□□□□□ -2.55
SHOX2O60902 snoU13.13-201ENST00000458842 104 ntBASIC-0.9□□□□□ -2.55
SHOX2O60902 RNU6-976P-201ENST00000516086 111 ntBASIC-0.9□□□□□ -2.55
SHOX2O60902 RNU7-13P-201ENST00000516413 62 ntBASIC-0.9□□□□□ -2.55
SHOX2O60902 MIR548AG2-201ENST00000581228 64 ntBASIC-0.9□□□□□ -2.55
SHOX2O60902 snoU18.1-201ENST00000629629 71 ntBASIC-0.9□□□□□ -2.55
SHOX2O60902 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.91□□□□□ -2.56
SHOX2O60902 Y_RNA.566-201ENST00000384735 101 ntBASIC-0.91□□□□□ -2.56
SHOX2O60902 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.91□□□□□ -2.56
SHOX2O60902 SCARNA15-202ENST00000516881 127 ntBASIC-0.91□□□□□ -2.56
SHOX2O60902 SNORA40.17-201ENST00000517256 115 ntBASIC-0.91□□□□□ -2.56
SHOX2O60902 YWHAEP2-201ENST00000580066 112 ntBASIC-0.91□□□□□ -2.56
SHOX2O60902 SNORD114-10-201ENST00000363409 72 ntBASIC-0.92□□□□□ -2.56
SHOX2O60902 SNORD18.1-201ENST00000363807 70 ntBASIC-0.92□□□□□ -2.56
SHOX2O60902 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.92□□□□□ -2.56
SHOX2O60902 SNORD114-17-201ENST00000364699 75 ntBASIC-0.92□□□□□ -2.56
SHOX2O60902 SNORD115-20-201ENST00000365099 82 ntBASIC-0.92□□□□□ -2.56
SHOX2O60902 MIR519E-201ENST00000385075 84 ntBASIC-0.92□□□□□ -2.56
SHOX2O60902 MIR519A1-201ENST00000385257 85 ntBASIC-0.92□□□□□ -2.56
SHOX2O60902 SNORA49-201ENST00000386157 136 ntBASIC-0.92□□□□□ -2.56
SHOX2O60902 SNORA79-201ENST00000408376 140 ntBASIC-0.92□□□□□ -2.56
SHOX2O60902 RNA5SP144-201ENST00000410846 116 ntBASIC-0.92□□□□□ -2.56
SHOX2O60902 SERF1AP1-201ENST00000514575 187 ntBASIC-0.92□□□□□ -2.56
SHOX2O60902 AC084781.2-201ENST00000615568 161 ntBASIC-0.92□□□□□ -2.56
SHOX2O60902 MIR6502-201ENST00000617296 76 ntBASIC-0.92□□□□□ -2.56
SHOX2O60902 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.93□□□□□ -2.56
SHOX2O60902 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.93□□□□□ -2.56
SHOX2O60902 SNORD115-35-201ENST00000365122 82 ntBASIC-0.93□□□□□ -2.56
SHOX2O60902 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.93□□□□□ -2.56
SHOX2O60902 SNORA32-201ENST00000384072 121 ntBASIC-0.93□□□□□ -2.56
SHOX2O60902 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.93□□□□□ -2.56
SHOX2O60902 MT-TL1-201ENST00000386347 75 ntBASIC-0.93□□□□□ -2.56
SHOX2O60902 MT-TT-201ENST00000387460 66 ntBASIC-0.93□□□□□ -2.56
SHOX2O60902 RNU6-876P-201ENST00000391295 104 ntBASIC-0.93□□□□□ -2.56
SHOX2O60902 MIR1302-11-201ENST00000408051 138 ntBASIC-0.93□□□□□ -2.56
SHOX2O60902 MIR1302-9-201ENST00000408365 138 ntBASIC-0.93□□□□□ -2.56
SHOX2O60902 MIR1302-10-201ENST00000408734 138 ntBASIC-0.93□□□□□ -2.56
SHOX2O60902 AC006504.6-201ENST00000590142 199 ntBASIC-0.93□□□□□ -2.56
SHOX2O60902 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.93□□□□□ -2.56
SHOX2O60902 MIR1302-2-201ENST00000607096 138 ntBASIC-0.93□□□□□ -2.56
SHOX2O60902 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.94□□□□□ -2.56
SHOX2O60902 RNU6-154P-201ENST00000384306 106 ntBASIC-0.94□□□□□ -2.56
SHOX2O60902 AL606845.1-201ENST00000404881 255 ntBASIC-0.94□□□□□ -2.56
SHOX2O60902 AP000533.3-201ENST00000447704 118 ntBASIC-0.94□□□□□ -2.56
SHOX2O60902 RNU7-195P-201ENST00000458793 62 ntBASIC-0.94□□□□□ -2.56
SHOX2O60902 RNU7-113P-201ENST00000459273 62 ntBASIC-0.94□□□□□ -2.56
SHOX2O60902 RNU6-412P-201ENST00000516434 106 ntBASIC-0.94□□□□□ -2.56
SHOX2O60902 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.94□□□□□ -2.56
SHOX2O60902 AC090574.1-201ENST00000623186 233 ntBASIC-0.94□□□□□ -2.56
SHOX2O60902 UBE2WP1-201ENST00000362030 340 ntBASIC-0.95□□□□□ -2.56
SHOX2O60902 RNU6-228P-201ENST00000362700 106 ntBASIC-0.95□□□□□ -2.56
SHOX2O60902 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.95□□□□□ -2.56
SHOX2O60902 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.95□□□□□ -2.56
SHOX2O60902 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.95□□□□□ -2.56
SHOX2O60902 MIR617-201ENST00000385030 97 ntBASIC-0.95□□□□□ -2.56
SHOX2O60902 MIR616-201ENST00000385293 97 ntBASIC-0.95□□□□□ -2.56
SHOX2O60902 RNU6-588P-201ENST00000410281 105 ntBASIC-0.95□□□□□ -2.56
SHOX2O60902 AL353813.1-201ENST00000440700 253 ntBASIC-0.95□□□□□ -2.56
SHOX2O60902 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.95□□□□□ -2.56
SHOX2O60902 MIR20A-201ENST00000362279 71 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 198.2 ms