Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RNA5SP272-201ENST00000516095 111 ntBASIC0.18□□□□□ -2.38
SNX3O60493 RNU7-161P-201ENST00000517289 62 ntBASIC0.18□□□□□ -2.38
SNX3O60493 RNU7-10P-201ENST00000607194 63 ntBASIC0.18□□□□□ -2.38
SNX3O60493 MIR1263-201ENST00000408324 86 ntBASIC0.17□□□□□ -2.38
SNX3O60493 RNU6-794P-201ENST00000517261 64 ntBASIC0.17□□□□□ -2.38
SNX3O60493 MIR3163-201ENST00000581592 73 ntBASIC0.17□□□□□ -2.38
SNX3O60493 Y_RNA.773-201ENST00000607168 90 ntBASIC0.17□□□□□ -2.38
SNX3O60493 Y_RNA.676-201ENST00000516393 96 ntBASIC0.16□□□□□ -2.38
SNX3O60493 MIR4752-201ENST00000579672 72 ntBASIC0.16□□□□□ -2.38
SNX3O60493 U7.2-201ENST00000607576 63 ntBASIC0.16□□□□□ -2.38
SNX3O60493 AC022709.1-201ENST00000615967 87 ntBASIC0.16□□□□□ -2.38
SNX3O60493 MIR6734-201ENST00000621166 68 ntBASIC0.16□□□□□ -2.38
SNX3O60493 SNORD115-19-201ENST00000363098 82 ntBASIC0.15□□□□□ -2.39
SNX3O60493 SNORD115-18-201ENST00000363293 82 ntBASIC0.15□□□□□ -2.39
SNX3O60493 Y_RNA.198-201ENST00000364013 98 ntBASIC0.15□□□□□ -2.39
SNX3O60493 SNORD115-17-201ENST00000364612 82 ntBASIC0.15□□□□□ -2.39
SNX3O60493 RNU6-726P-201ENST00000364680 107 ntBASIC0.15□□□□□ -2.39
SNX3O60493 RNU6-42P-201ENST00000384165 107 ntBASIC0.15□□□□□ -2.39
SNX3O60493 Y_RNA.488-201ENST00000384403 102 ntBASIC0.15□□□□□ -2.39
SNX3O60493 Y_RNA.555-201ENST00000384673 110 ntBASIC0.15□□□□□ -2.39
SNX3O60493 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
SNX3O60493 AL158147.1-201ENST00000443970 75 ntBASIC0.15□□□□□ -2.39
SNX3O60493 RNU7-104P-201ENST00000459398 79 ntBASIC0.15□□□□□ -2.39
SNX3O60493 RNU6-426P-201ENST00000516464 97 ntBASIC0.15□□□□□ -2.39
SNX3O60493 MIR4315-1-201ENST00000636800 73 ntBASIC0.15□□□□□ -2.39
SNX3O60493 MIR4315-2-201ENST00000640925 73 ntBASIC0.15□□□□□ -2.39
SNX3O60493 RNA5SP403-201ENST00000363598 108 ntBASIC0.14□□□□□ -2.39
SNX3O60493 Y_RNA.213-201ENST00000364178 111 ntBASIC0.14□□□□□ -2.39
SNX3O60493 Y_RNA.221-201ENST00000364248 96 ntBASIC0.14□□□□□ -2.39
SNX3O60493 Y_RNA.226-201ENST00000364337 114 ntBASIC0.14□□□□□ -2.39
SNX3O60493 MIR34C-201ENST00000384831 77 ntBASIC0.14□□□□□ -2.39
SNX3O60493 MIR599-201ENST00000385069 95 ntBASIC0.14□□□□□ -2.39
SNX3O60493 MIR548L-201ENST00000408303 86 ntBASIC0.14□□□□□ -2.39
SNX3O60493 MIR548I2-201ENST00000408348 149 ntBASIC0.14□□□□□ -2.39
SNX3O60493 RNU6-735P-201ENST00000410612 107 ntBASIC0.14□□□□□ -2.39
SNX3O60493 RNA5SP136-201ENST00000410906 107 ntBASIC0.14□□□□□ -2.39
SNX3O60493 RNU6-781P-201ENST00000516377 101 ntBASIC0.14□□□□□ -2.39
SNX3O60493 RNU6-521P-201ENST00000516663 105 ntBASIC0.14□□□□□ -2.39
SNX3O60493 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
SNX3O60493 MIR1255B1-201ENST00000636325 63 ntBASIC0.14□□□□□ -2.39
SNX3O60493 SNORA9.1-201ENST00000362412 131 ntBASIC0.13□□□□□ -2.39
SNX3O60493 Y_RNA.170-201ENST00000363746 110 ntBASIC0.13□□□□□ -2.39
SNX3O60493 Y_RNA.360-201ENST00000365512 102 ntBASIC0.13□□□□□ -2.39
SNX3O60493 MIR759-201ENST00000390224 91 ntBASIC0.13□□□□□ -2.39
SNX3O60493 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
SNX3O60493 RNU1-29P-201ENST00000606574 126 ntBASIC0.13□□□□□ -2.39
SNX3O60493 Y_RNA.180-201ENST00000363867 113 ntBASIC0.12□□□□□ -2.39
SNX3O60493 Y_RNA.528-201ENST00000384575 108 ntBASIC0.12□□□□□ -2.39
SNX3O60493 MIR760-201ENST00000390220 80 ntBASIC0.12□□□□□ -2.39
SNX3O60493 MIR1287-201ENST00000408492 90 ntBASIC0.12□□□□□ -2.39
SNX3O60493 AC097635.1-201ENST00000450678 155 ntBASIC0.12□□□□□ -2.39
SNX3O60493 RNA5SP436-201ENST00000516020 115 ntBASIC0.12□□□□□ -2.39
SNX3O60493 Y_RNA.116-201ENST00000363292 103 ntBASIC0.11□□□□□ -2.39
SNX3O60493 Y_RNA.464-201ENST00000384282 110 ntBASIC0.11□□□□□ -2.39
SNX3O60493 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.11□□□□□ -2.39
SNX3O60493 SNORD63B-201ENST00000411005 70 ntBASIC0.11□□□□□ -2.39
SNX3O60493 RNU6-848P-201ENST00000515948 107 ntBASIC0.11□□□□□ -2.39
SNX3O60493 RNU7-200P-201ENST00000516105 62 ntBASIC0.11□□□□□ -2.39
SNX3O60493 RNU7-129P-201ENST00000516128 62 ntBASIC0.11□□□□□ -2.39
SNX3O60493 RNU6-617P-201ENST00000516147 107 ntBASIC0.11□□□□□ -2.39
SNX3O60493 RNU6-473P-201ENST00000516164 107 ntBASIC0.11□□□□□ -2.39
SNX3O60493 RNU6-1049P-201ENST00000516414 107 ntBASIC0.11□□□□□ -2.39
SNX3O60493 RNU6-1234P-201ENST00000516877 103 ntBASIC0.11□□□□□ -2.39
SNX3O60493 AL162376.1-201ENST00000624117 175 ntBASIC0.11□□□□□ -2.39
SNX3O60493 AC067863.3-201ENST00000624172 122 ntBASIC0.11□□□□□ -2.39
SNX3O60493 RNU6-235P-201ENST00000362644 107 ntBASIC0.1□□□□□ -2.39
SNX3O60493 RNU6-170P-201ENST00000362832 104 ntBASIC0.1□□□□□ -2.39
SNX3O60493 SNORA2A-201ENST00000383885 135 ntBASIC0.1□□□□□ -2.39
SNX3O60493 RNU6-571P-201ENST00000384128 107 ntBASIC0.1□□□□□ -2.39
SNX3O60493 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
SNX3O60493 RNU7-195P-201ENST00000458793 62 ntBASIC0.1□□□□□ -2.39
SNX3O60493 RNU6-1232P-201ENST00000516299 86 ntBASIC0.1□□□□□ -2.39
SNX3O60493 MIR548D2-201ENST00000384955 97 ntBASIC0.09□□□□□ -2.4
SNX3O60493 MIR519A1-201ENST00000385257 85 ntBASIC0.09□□□□□ -2.4
SNX3O60493 MTND4LP9-201ENST00000427694 174 ntBASIC0.09□□□□□ -2.4
SNX3O60493 RPL39P34-201ENST00000477141 156 ntBASIC0.09□□□□□ -2.4
SNX3O60493 RNA5SP128-201ENST00000365305 116 ntBASIC0.08□□□□□ -2.4
SNX3O60493 SNORD41.1-201ENST00000391000 69 ntBASIC0.08□□□□□ -2.4
SNX3O60493 Y_RNA.809-201ENST00000516058 95 ntBASIC0.08□□□□□ -2.4
SNX3O60493 RNU6-850P-201ENST00000516934 103 ntBASIC0.08□□□□□ -2.4
SNX3O60493 RNU6-1212P-201ENST00000517023 104 ntBASIC0.08□□□□□ -2.4
SNX3O60493 MIR924-201ENST00000638017 53 ntBASIC0.08□□□□□ -2.4
SNX3O60493 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.08□□□□□ -2.4
SNX3O60493 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
SNX3O60493 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
SNX3O60493 SNORD114-23-201ENST00000363536 72 ntBASIC0.07□□□□□ -2.4
SNX3O60493 Y_RNA.362-201ENST00000365518 110 ntBASIC0.07□□□□□ -2.4
SNX3O60493 MIR518E-201ENST00000385252 88 ntBASIC0.07□□□□□ -2.4
SNX3O60493 RNU6-127P-201ENST00000390897 107 ntBASIC0.07□□□□□ -2.4
SNX3O60493 RNU6-269P-201ENST00000391077 97 ntBASIC0.07□□□□□ -2.4
SNX3O60493 SNORA7.5-201ENST00000410672 110 ntBASIC0.07□□□□□ -2.4
SNX3O60493 RNU7-106P-201ENST00000459514 67 ntBASIC0.07□□□□□ -2.4
SNX3O60493 RNU6-255P-201ENST00000516957 105 ntBASIC0.07□□□□□ -2.4
SNX3O60493 SNORA70.25-201ENST00000612741 95 ntBASIC0.07□□□□□ -2.4
SNX3O60493 MIR499B-201ENST00000636498 73 ntBASIC0.07□□□□□ -2.4
SNX3O60493 RNU4-67P-201ENST00000364569 141 ntBASIC0.06□□□□□ -2.4
SNX3O60493 SNORD58C-201ENST00000365223 64 ntBASIC0.06□□□□□ -2.4
SNX3O60493 SNORD38.2-201ENST00000384470 69 ntBASIC0.06□□□□□ -2.4
SNX3O60493 RNU6-346P-201ENST00000516288 111 ntBASIC0.06□□□□□ -2.4
SNX3O60493 RNU6-1061P-201ENST00000516530 99 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 215.7 ms