Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC068137.3-201ENST00000639191 341 ntBASIC-2.88□□□□□ -2.87
CHD1O14646 RNU6-648P-201ENST00000410190 107 ntBASIC-2.88□□□□□ -2.87
CHD1O14646 MIR1270-201ENST00000459320 83 ntBASIC-2.88□□□□□ -2.87
CHD1O14646 RNU7-2P-201ENST00000516096 62 ntBASIC-2.88□□□□□ -2.87
CHD1O14646 MIR4696-201ENST00000581431 70 ntBASIC-2.88□□□□□ -2.87
CHD1O14646 U6.92-201ENST00000636464 89 ntBASIC-2.88□□□□□ -2.87
CHD1O14646 Y_RNA.120-201ENST00000363304 110 ntBASIC-2.89□□□□□ -2.87
CHD1O14646 RNU6-647P-201ENST00000364243 107 ntBASIC-2.89□□□□□ -2.87
CHD1O14646 Y_RNA.296-201ENST00000364930 108 ntBASIC-2.89□□□□□ -2.87
CHD1O14646 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.89□□□□□ -2.87
CHD1O14646 RNU6-1068P-201ENST00000410958 103 ntBASIC-2.89□□□□□ -2.87
CHD1O14646 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-2.89□□□□□ -2.87
CHD1O14646 Y_RNA.655-201ENST00000515919 96 ntBASIC-2.89□□□□□ -2.87
CHD1O14646 RNU6-1088P-201ENST00000516850 104 ntBASIC-2.89□□□□□ -2.87
CHD1O14646 MIR548AE2-201ENST00000583456 67 ntBASIC-2.89□□□□□ -2.87
CHD1O14646 AC040904.1-201ENST00000590850 223 ntBASIC-2.89□□□□□ -2.87
CHD1O14646 Y_RNA.23-201ENST00000362496 106 ntBASIC-2.9□□□□□ -2.87
CHD1O14646 RNY4P9-201ENST00000363194 97 ntBASIC-2.9□□□□□ -2.87
CHD1O14646 Y_RNA.414-201ENST00000384011 101 ntBASIC-2.9□□□□□ -2.87
CHD1O14646 SNORD101-201ENST00000384027 73 ntBASIC-2.9□□□□□ -2.87
CHD1O14646 RNU6-957P-201ENST00000363652 99 ntBASIC-2.9□□□□□ -2.87
CHD1O14646 Y_RNA.360-201ENST00000365512 102 ntBASIC-2.9□□□□□ -2.87
CHD1O14646 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.9□□□□□ -2.87
CHD1O14646 PMCHL1-202ENST00000423102 261 ntBASIC-2.9□□□□□ -2.87
CHD1O14646 Y_RNA.677-201ENST00000516401 85 ntBASIC-2.9□□□□□ -2.87
CHD1O14646 Y_RNA.691-201ENST00000516611 103 ntBASIC-2.9□□□□□ -2.87
CHD1O14646 RNU7-110P-201ENST00000516891 62 ntBASIC-2.9□□□□□ -2.87
CHD1O14646 AC087741.2-201ENST00000619415 172 ntBASIC-2.9□□□□□ -2.87
CHD1O14646 Z69908.1-201ENST00000622603 247 ntBASIC-2.9□□□□□ -2.87
CHD1O14646 RNU6-1013P-201ENST00000384180 107 ntBASIC-2.91□□□□□ -2.88
CHD1O14646 RNU6-763P-201ENST00000390865 106 ntBASIC-2.91□□□□□ -2.88
CHD1O14646 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-2.91□□□□□ -2.88
CHD1O14646 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.92□□□□□ -2.88
CHD1O14646 AC113618.1-201ENST00000416747 285 ntBASIC-2.92□□□□□ -2.88
CHD1O14646 RNU6-570P-201ENST00000517051 105 ntBASIC-2.92□□□□□ -2.88
CHD1O14646 CYP3A54P-201ENST00000566950 75 ntBASIC-2.92□□□□□ -2.88
CHD1O14646 MIR376B-201ENST00000614515 100 ntBASIC-2.92□□□□□ -2.88
CHD1O14646 MIR5683-201ENST00000636514 76 ntBASIC-2.92□□□□□ -2.88
CHD1O14646 Y_RNA.380-201ENST00000365663 111 ntBASIC-2.93□□□□□ -2.88
CHD1O14646 RNU4-69P-201ENST00000410677 143 ntBASIC-2.93□□□□□ -2.88
CHD1O14646 RNU6-1052P-201ENST00000411398 104 ntBASIC-2.93□□□□□ -2.88
CHD1O14646 RNU6-559P-201ENST00000516151 98 ntBASIC-2.93□□□□□ -2.88
CHD1O14646 RNU6-719P-201ENST00000516671 104 ntBASIC-2.93□□□□□ -2.88
CHD1O14646 MIR367-201ENST00000362299 68 ntBASIC-2.93□□□□□ -2.88
CHD1O14646 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.93□□□□□ -2.88
CHD1O14646 MIR1255B2-201ENST00000408618 67 ntBASIC-2.93□□□□□ -2.88
CHD1O14646 RNU6-307P-201ENST00000516743 106 ntBASIC-2.93□□□□□ -2.88
CHD1O14646 AL365205.2-201ENST00000594586 68 ntBASIC-2.93□□□□□ -2.88
CHD1O14646 MIR3662-201ENST00000637030 95 ntBASIC-2.93□□□□□ -2.88
CHD1O14646 RNU6-1214P-201ENST00000363650 109 ntBASIC-2.94□□□□□ -2.88
CHD1O14646 RNU6-472P-201ENST00000384299 107 ntBASIC-2.94□□□□□ -2.88
CHD1O14646 AC009161.1-201ENST00000417306 376 ntBASIC-2.94□□□□□ -2.88
CHD1O14646 AC019235.1-201ENST00000503847 207 ntBASIC-2.94□□□□□ -2.88
CHD1O14646 MIR4528-201ENST00000577763 90 ntBASIC-2.94□□□□□ -2.88
CHD1O14646 RPL35AP4-201ENST00000412007 102 ntBASIC-2.95□□□□□ -2.88
CHD1O14646 SCARNA15-202ENST00000516881 127 ntBASIC-2.95□□□□□ -2.88
CHD1O14646 AC084782.3-201ENST00000612282 578 ntBASIC-2.95□□□□□ -2.88
CHD1O14646 AF246928.1-201ENST00000623768 87 ntBASIC-2.95□□□□□ -2.88
CHD1O14646 SNORD38.2-201ENST00000384470 69 ntBASIC-2.96□□□□□ -2.88
CHD1O14646 SNORA79-201ENST00000408376 140 ntBASIC-2.96□□□□□ -2.88
CHD1O14646 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.96□□□□□ -2.88
CHD1O14646 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-2.96□□□□□ -2.88
CHD1O14646 Y_RNA.75-201ENST00000362927 97 ntBASIC-2.96□□□□□ -2.88
CHD1O14646 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.96□□□□□ -2.88
CHD1O14646 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.96□□□□□ -2.88
CHD1O14646 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.96□□□□□ -2.88
CHD1O14646 SNORD19-201ENST00000391191 68 ntBASIC-2.96□□□□□ -2.88
CHD1O14646 Y_RNA.615-201ENST00000410769 117 ntBASIC-2.96□□□□□ -2.88
CHD1O14646 MTND2P31-201ENST00000512602 616 ntBASIC-2.96□□□□□ -2.88
CHD1O14646 MIR3123-201ENST00000583417 75 ntBASIC-2.96□□□□□ -2.88
CHD1O14646 RNU2-4P-201ENST00000606190 192 ntBASIC-2.96□□□□□ -2.88
CHD1O14646 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.96□□□□□ -2.88
CHD1O14646 RNU6-235P-201ENST00000362644 107 ntBASIC-2.97□□□□□ -2.89
CHD1O14646 Y_RNA.199-201ENST00000364014 102 ntBASIC-2.97□□□□□ -2.89
CHD1O14646 Y_RNA.301-201ENST00000364990 103 ntBASIC-2.97□□□□□ -2.89
CHD1O14646 Y_RNA.592-201ENST00000410274 109 ntBASIC-2.97□□□□□ -2.89
CHD1O14646 RNU6-1050P-201ENST00000410388 107 ntBASIC-2.97□□□□□ -2.89
CHD1O14646 RNU7-169P-201ENST00000459456 61 ntBASIC-2.97□□□□□ -2.89
CHD1O14646 RNU6-507P-201ENST00000516045 100 ntBASIC-2.97□□□□□ -2.89
CHD1O14646 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-2.97□□□□□ -2.89
CHD1O14646 RNU6-230P-201ENST00000362457 104 ntBASIC-2.98□□□□□ -2.89
CHD1O14646 SEPT14P8-201ENST00000508026 178 ntBASIC-2.98□□□□□ -2.89
CHD1O14646 Y_RNA.682-201ENST00000516457 100 ntBASIC-2.98□□□□□ -2.89
CHD1O14646 AP002392.1-201ENST00000537692 208 ntBASIC-2.98□□□□□ -2.89
CHD1O14646 Y_RNA.157-201ENST00000363638 102 ntBASIC-2.99□□□□□ -2.89
CHD1O14646 RNU5A-2P-201ENST00000384337 116 ntBASIC-2.99□□□□□ -2.89
CHD1O14646 MT-TT-201ENST00000387460 66 ntBASIC-2.99□□□□□ -2.89
CHD1O14646 Y_RNA.772-201ENST00000606692 102 ntBASIC-2.99□□□□□ -2.89
CHD1O14646 MIR526A2-201ENST00000390198 65 ntBASIC-2.99□□□□□ -2.89
CHD1O14646 AL009048.1-201ENST00000450437 298 ntBASIC-2.99□□□□□ -2.89
CHD1O14646 AC107399.1-201ENST00000451226 265 ntBASIC-2.99□□□□□ -2.89
CHD1O14646 Y_RNA.39-201ENST00000362620 98 ntBASIC-3□□□□□ -2.89
CHD1O14646 Y_RNA.603-201ENST00000410571 108 ntBASIC-3□□□□□ -2.89
CHD1O14646 MRPS35P2-201ENST00000508242 191 ntBASIC-3□□□□□ -2.89
CHD1O14646 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-3□□□□□ -2.89
CHD1O14646 RNU6-495P-201ENST00000362995 107 ntBASIC-3.01□□□□□ -2.89
CHD1O14646 Y_RNA.173-201ENST00000363776 113 ntBASIC-3.01□□□□□ -2.89
CHD1O14646 RNU6-987P-201ENST00000384759 104 ntBASIC-3.01□□□□□ -2.89
CHD1O14646 Y_RNA.605-201ENST00000410577 105 ntBASIC-3.01□□□□□ -2.89
CHD1O14646 RNU6-1238P-201ENST00000517215 102 ntBASIC-3.01□□□□□ -2.89
Retrieved 100 of 98,524 protein–RNA pairs in 536.9 ms