Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
TRIM38O00635 AL096861.1-201ENST00000610899 123 ntBASIC1.44□□□□□ -2.18
TRIM38O00635 AL157834.3-201ENST00000615543 103 ntBASIC1.44□□□□□ -2.18
TRIM38O00635 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
TRIM38O00635 MIR4662A-201ENST00000637499 67 ntBASIC1.44□□□□□ -2.18
TRIM38O00635 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
TRIM38O00635 Y_RNA.118-201ENST00000363300 101 ntBASIC1.43□□□□□ -2.18
TRIM38O00635 RNU6-1067P-201ENST00000384752 107 ntBASIC1.43□□□□□ -2.18
TRIM38O00635 AC087499.7-201ENST00000441958 109 ntBASIC1.43□□□□□ -2.18
TRIM38O00635 AC139453.2-201ENST00000487255 133 ntBASIC1.43□□□□□ -2.18
TRIM38O00635 RNU7-41P-201ENST00000515917 61 ntBASIC1.43□□□□□ -2.18
TRIM38O00635 RNA5SP133-201ENST00000363368 119 ntBASIC1.42□□□□□ -2.18
TRIM38O00635 RNU6-1229P-201ENST00000364295 107 ntBASIC1.42□□□□□ -2.18
TRIM38O00635 Y_RNA.354-201ENST00000365448 111 ntBASIC1.42□□□□□ -2.18
TRIM38O00635 MIR519C-201ENST00000385053 87 ntBASIC1.42□□□□□ -2.18
TRIM38O00635 SNORA31.2-201ENST00000516019 134 ntBASIC1.42□□□□□ -2.18
TRIM38O00635 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
TRIM38O00635 RNU7-153P-201ENST00000516455 62 ntBASIC1.42□□□□□ -2.18
TRIM38O00635 AC140658.3-201ENST00000567603 271 ntBASIC1.42□□□□□ -2.18
TRIM38O00635 AC141846.1-201ENST00000568348 142 ntBASIC1.42□□□□□ -2.18
TRIM38O00635 AP001362.1-201ENST00000625165 124 ntBASIC1.42□□□□□ -2.18
TRIM38O00635 HSBP1P2-201ENST00000299671 229 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 Y_RNA.98-201ENST00000363109 102 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
TRIM38O00635 RNU6-447P-201ENST00000410293 104 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 RNU6-1118P-201ENST00000410382 104 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 RNU6-1076P-201ENST00000410397 104 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 RNU6-355P-201ENST00000410427 104 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 RNU6-791P-201ENST00000410467 104 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 RNU6-705P-201ENST00000410601 104 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 RNU6-1100P-201ENST00000410691 104 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 RNU6-860P-201ENST00000410860 104 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 RNU4-83P-201ENST00000410863 133 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 RNU6-1217P-201ENST00000411276 104 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 RNU6-785P-201ENST00000411324 104 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 AL133373.1-201ENST00000497098 94 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 AC093729.1-201ENST00000513074 128 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 MTND5P40-201ENST00000559945 246 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.41□□□□□ -2.18
TRIM38O00635 U6.90-201ENST00000614007 104 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 AL353770.2-201ENST00000620024 78 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 U6.70-201ENST00000620287 104 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 MIR4251-201ENST00000635819 61 ntBASIC1.41□□□□□ -2.18
TRIM38O00635 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TRIM38O00635 AC244023.1-201ENST00000426884 112 ntBASIC1.4□□□□□ -2.19
TRIM38O00635 MIR3192-201ENST00000584920 77 ntBASIC1.4□□□□□ -2.19
TRIM38O00635 AC242498.1-201ENST00000604134 111 ntBASIC1.4□□□□□ -2.19
TRIM38O00635 MIR6504-201ENST00000613520 61 ntBASIC1.4□□□□□ -2.19
TRIM38O00635 AL662814.1-201ENST00000617364 121 ntBASIC1.4□□□□□ -2.19
TRIM38O00635 Y_RNA.224-201ENST00000364308 111 ntBASIC1.39□□□□□ -2.19
TRIM38O00635 RNU6-53P-201ENST00000365367 106 ntBASIC1.39□□□□□ -2.19
TRIM38O00635 SNORD38B-201ENST00000384690 67 ntBASIC1.39□□□□□ -2.19
TRIM38O00635 MIR518E-201ENST00000385252 88 ntBASIC1.39□□□□□ -2.19
TRIM38O00635 SNORD12-201ENST00000391002 90 ntBASIC1.39□□□□□ -2.19
TRIM38O00635 AC073261.1-201ENST00000429409 121 ntBASIC1.39□□□□□ -2.19
TRIM38O00635 AC048334.1-201ENST00000477975 159 ntBASIC1.39□□□□□ -2.19
TRIM38O00635 AC090897.1-201ENST00000580909 226 ntBASIC1.39□□□□□ -2.19
TRIM38O00635 SNORD38B-202ENST00000625943 69 ntBASIC1.39□□□□□ -2.19
TRIM38O00635 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
TRIM38O00635 SNORA25.3-201ENST00000363205 127 ntBASIC1.38□□□□□ -2.19
TRIM38O00635 RNU6-478P-201ENST00000363904 110 ntBASIC1.38□□□□□ -2.19
TRIM38O00635 RNU6-480P-201ENST00000384332 107 ntBASIC1.38□□□□□ -2.19
TRIM38O00635 SNORD38.2-201ENST00000384470 69 ntBASIC1.38□□□□□ -2.19
TRIM38O00635 MIR1302-7-201ENST00000408841 72 ntBASIC1.38□□□□□ -2.19
TRIM38O00635 RNU6-519P-201ENST00000410590 108 ntBASIC1.38□□□□□ -2.19
TRIM38O00635 RNU7-85P-201ENST00000458851 63 ntBASIC1.38□□□□□ -2.19
TRIM38O00635 RNU1-123P-201ENST00000458950 160 ntBASIC1.38□□□□□ -2.19
TRIM38O00635 AC138749.4-201ENST00000563970 127 ntBASIC1.38□□□□□ -2.19
TRIM38O00635 RNA5SP327-201ENST00000362494 101 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 Y_RNA.168-201ENST00000363740 102 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 RNY1P2-201ENST00000364820 117 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 RNU6-949P-201ENST00000384040 107 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 SNORA25-201ENST00000384384 134 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 Y_RNA.565-201ENST00000384719 101 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
TRIM38O00635 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
TRIM38O00635 RNA5SP237-201ENST00000410414 113 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 SNRPGP12-201ENST00000449481 213 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 snoU13.25-201ENST00000458945 104 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 SNORD4B-201ENST00000459083 72 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 RNA5SP102-201ENST00000516865 106 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 SNORA70.22-201ENST00000517160 124 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 AC133485.1-201ENST00000567176 124 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 PRELID3BP2-201ENST00000605362 201 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 Y_RNA.788-201ENST00000622394 112 ntBASIC1.37□□□□□ -2.19
TRIM38O00635 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
TRIM38O00635 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.36□□□□□ -2.19
TRIM38O00635 AL450471.1-201ENST00000447509 127 ntBASIC1.36□□□□□ -2.19
TRIM38O00635 snoU13.2-201ENST00000459201 104 ntBASIC1.36□□□□□ -2.19
TRIM38O00635 SNORA25.13-201ENST00000516395 103 ntBASIC1.36□□□□□ -2.19
TRIM38O00635 AP003716.2-201ENST00000528260 108 ntBASIC1.36□□□□□ -2.19
TRIM38O00635 AC145423.2-201ENST00000610631 239 ntBASIC1.36□□□□□ -2.19
TRIM38O00635 Y_RNA.57-201ENST00000362806 113 ntBASIC1.35□□□□□ -2.19
TRIM38O00635 RNU4-32P-201ENST00000363404 141 ntBASIC1.35□□□□□ -2.19
TRIM38O00635 SNORD115-37-201ENST00000363768 82 ntBASIC1.35□□□□□ -2.19
TRIM38O00635 MIR489-201ENST00000384923 84 ntBASIC1.35□□□□□ -2.19
TRIM38O00635 MIR563-201ENST00000385080 79 ntBASIC1.35□□□□□ -2.19
TRIM38O00635 AC004223.1-201ENST00000479840 271 ntBASIC1.35□□□□□ -2.19
TRIM38O00635 RNU6-850P-201ENST00000516934 103 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 267.4 ms