Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MTCYBP9-201ENST00000431021 303 ntBASIC-0.27□□□□□ -2.45
DDX39AO00148 MIR3128-201ENST00000581957 66 ntBASIC-0.27□□□□□ -2.45
DDX39AO00148 RNU6-312P-201ENST00000364629 107 ntBASIC-0.28□□□□□ -2.45
DDX39AO00148 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.28□□□□□ -2.45
DDX39AO00148 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.28□□□□□ -2.45
DDX39AO00148 SNORD77B-201ENST00000391112 67 ntBASIC-0.28□□□□□ -2.45
DDX39AO00148 MIR1265-201ENST00000408444 86 ntBASIC-0.28□□□□□ -2.45
DDX39AO00148 MIR1912-201ENST00000410389 80 ntBASIC-0.28□□□□□ -2.45
DDX39AO00148 BX276092.1-201ENST00000427368 251 ntBASIC-0.28□□□□□ -2.45
DDX39AO00148 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.28□□□□□ -2.45
DDX39AO00148 MIR568-201ENST00000385036 95 ntBASIC-0.29□□□□□ -2.46
DDX39AO00148 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.29□□□□□ -2.46
DDX39AO00148 SNORD110-201ENST00000408189 75 ntBASIC-0.29□□□□□ -2.46
DDX39AO00148 MIR548I2-201ENST00000408348 149 ntBASIC-0.29□□□□□ -2.46
DDX39AO00148 RNU6-588P-201ENST00000410281 105 ntBASIC-0.29□□□□□ -2.46
DDX39AO00148 AC006210.1-201ENST00000424882 111 ntBASIC-0.29□□□□□ -2.46
DDX39AO00148 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.29□□□□□ -2.46
DDX39AO00148 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.29□□□□□ -2.46
DDX39AO00148 RNU6-180P-201ENST00000516697 61 ntBASIC-0.29□□□□□ -2.46
DDX39AO00148 RNU6-111P-201ENST00000517179 105 ntBASIC-0.29□□□□□ -2.46
DDX39AO00148 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
DDX39AO00148 NAMPTP3-201ENST00000569273 224 ntBASIC-0.29□□□□□ -2.46
DDX39AO00148 AP001362.1-201ENST00000625165 124 ntBASIC-0.29□□□□□ -2.46
DDX39AO00148 MIR6844-201ENST00000637122 62 ntBASIC-0.29□□□□□ -2.46
DDX39AO00148 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.3□□□□□ -2.46
DDX39AO00148 RNU6-47P-201ENST00000383866 107 ntBASIC-0.3□□□□□ -2.46
DDX39AO00148 SNORA75.1-201ENST00000391130 148 ntBASIC-0.3□□□□□ -2.46
DDX39AO00148 MIR1302-3-201ENST00000408128 138 ntBASIC-0.3□□□□□ -2.46
DDX39AO00148 HMGN2P22-201ENST00000427588 175 ntBASIC-0.3□□□□□ -2.46
DDX39AO00148 RNA5SP484-201ENST00000458857 111 ntBASIC-0.3□□□□□ -2.46
DDX39AO00148 MIR4636-201ENST00000582271 80 ntBASIC-0.3□□□□□ -2.46
DDX39AO00148 RNU6-508P-201ENST00000363231 103 ntBASIC-0.31□□□□□ -2.46
DDX39AO00148 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.31□□□□□ -2.46
DDX39AO00148 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.31□□□□□ -2.46
DDX39AO00148 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.31□□□□□ -2.46
DDX39AO00148 RNU6-509P-201ENST00000363519 107 ntBASIC-0.31□□□□□ -2.46
DDX39AO00148 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.31□□□□□ -2.46
DDX39AO00148 MIR519A1-201ENST00000385257 85 ntBASIC-0.31□□□□□ -2.46
DDX39AO00148 RNU7-195P-201ENST00000458793 62 ntBASIC-0.31□□□□□ -2.46
DDX39AO00148 RNU7-2P-201ENST00000516096 62 ntBASIC-0.31□□□□□ -2.46
DDX39AO00148 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.31□□□□□ -2.46
DDX39AO00148 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.31□□□□□ -2.46
DDX39AO00148 MIR3646-201ENST00000578301 84 ntBASIC-0.31□□□□□ -2.46
DDX39AO00148 MIR3920-201ENST00000581751 86 ntBASIC-0.31□□□□□ -2.46
DDX39AO00148 AC062037.2-201ENST00000610137 73 ntBASIC-0.31□□□□□ -2.46
DDX39AO00148 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.32□□□□□ -2.46
DDX39AO00148 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.32□□□□□ -2.46
DDX39AO00148 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.32□□□□□ -2.46
DDX39AO00148 SNORD18B-201ENST00000365659 72 ntBASIC-0.32□□□□□ -2.46
DDX39AO00148 SNORD63B-201ENST00000411005 70 ntBASIC-0.32□□□□□ -2.46
DDX39AO00148 MIR4802-201ENST00000581881 80 ntBASIC-0.32□□□□□ -2.46
DDX39AO00148 MIR4645-201ENST00000583158 77 ntBASIC-0.32□□□□□ -2.46
DDX39AO00148 AC009779.6-201ENST00000603972 165 ntBASIC-0.32□□□□□ -2.46
DDX39AO00148 MIR6514-201ENST00000622549 70 ntBASIC-0.32□□□□□ -2.46
DDX39AO00148 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.33□□□□□ -2.46
DDX39AO00148 SNORA18.1-201ENST00000363418 128 ntBASIC-0.33□□□□□ -2.46
DDX39AO00148 RNY1P11-201ENST00000363759 113 ntBASIC-0.33□□□□□ -2.46
DDX39AO00148 RNU6-865P-201ENST00000364772 107 ntBASIC-0.33□□□□□ -2.46
DDX39AO00148 SNORA20.1-201ENST00000364790 130 ntBASIC-0.33□□□□□ -2.46
DDX39AO00148 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.33□□□□□ -2.46
DDX39AO00148 RNU6-616P-201ENST00000384353 107 ntBASIC-0.33□□□□□ -2.46
DDX39AO00148 SNORD4A-201ENST00000459174 72 ntBASIC-0.33□□□□□ -2.46
DDX39AO00148 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.33□□□□□ -2.46
DDX39AO00148 MIR376B-201ENST00000614515 100 ntBASIC-0.33□□□□□ -2.46
DDX39AO00148 RNU6-170P-201ENST00000362832 104 ntBASIC-0.34□□□□□ -2.46
DDX39AO00148 RNU6-309P-201ENST00000364573 106 ntBASIC-0.34□□□□□ -2.46
DDX39AO00148 SNORD115-35-201ENST00000365122 82 ntBASIC-0.34□□□□□ -2.46
DDX39AO00148 RNU6-46P-201ENST00000383860 107 ntBASIC-0.34□□□□□ -2.46
DDX39AO00148 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.34□□□□□ -2.46
DDX39AO00148 Z95118.1-201ENST00000421372 247 ntBASIC-0.34□□□□□ -2.46
DDX39AO00148 RNU7-13P-201ENST00000516413 62 ntBASIC-0.34□□□□□ -2.46
DDX39AO00148 CR383656.4-201ENST00000546909 122 ntBASIC-0.34□□□□□ -2.46
DDX39AO00148 AC084368.1-201ENST00000620935 65 ntBASIC-0.34□□□□□ -2.46
DDX39AO00148 MIR6086-201ENST00000638065 55 ntBASIC-0.34□□□□□ -2.46
DDX39AO00148 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.35□□□□□ -2.47
DDX39AO00148 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.35□□□□□ -2.47
DDX39AO00148 SNORD114-12-201ENST00000365400 75 ntBASIC-0.35□□□□□ -2.47
DDX39AO00148 RNU6-239P-201ENST00000390990 99 ntBASIC-0.35□□□□□ -2.47
DDX39AO00148 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.35□□□□□ -2.47
DDX39AO00148 MIR876-201ENST00000401147 81 ntBASIC-0.35□□□□□ -2.47
DDX39AO00148 AL603914.1-201ENST00000401964 204 ntBASIC-0.35□□□□□ -2.47
DDX39AO00148 SNORA25.13-201ENST00000516395 103 ntBASIC-0.35□□□□□ -2.47
DDX39AO00148 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.35□□□□□ -2.47
DDX39AO00148 RNY4P20-201ENST00000516678 93 ntBASIC-0.35□□□□□ -2.47
DDX39AO00148 AP001180.6-201ENST00000584918 159 ntBASIC-0.35□□□□□ -2.47
DDX39AO00148 AL670379.3-201ENST00000605040 251 ntBASIC-0.35□□□□□ -2.47
DDX39AO00148 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.35□□□□□ -2.47
DDX39AO00148 MIR3658-201ENST00000636291 56 ntBASIC-0.35□□□□□ -2.47
DDX39AO00148 MIR148A-201ENST00000362215 68 ntBASIC-0.36□□□□□ -2.47
DDX39AO00148 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.36□□□□□ -2.47
DDX39AO00148 RNU6-524P-201ENST00000384270 107 ntBASIC-0.36□□□□□ -2.47
DDX39AO00148 SNORD37.2-201ENST00000391075 66 ntBASIC-0.36□□□□□ -2.47
DDX39AO00148 RNU7-74P-201ENST00000459104 62 ntBASIC-0.36□□□□□ -2.47
DDX39AO00148 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.36□□□□□ -2.47
DDX39AO00148 AC022559.1-201ENST00000520905 205 ntBASIC-0.36□□□□□ -2.47
DDX39AO00148 AL137067.1-201ENST00000615933 120 ntBASIC-0.36□□□□□ -2.47
DDX39AO00148 SNORD114-28-201ENST00000363610 72 ntBASIC-0.37□□□□□ -2.47
DDX39AO00148 RNU6-571P-201ENST00000384128 107 ntBASIC-0.37□□□□□ -2.47
DDX39AO00148 MIR106A-201ENST00000384870 81 ntBASIC-0.37□□□□□ -2.47
DDX39AO00148 RNU7-121P-201ENST00000516604 62 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms