Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 RNU6-466P-201ENST00000391224 103 ntBASIC1.71□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-1254P-201ENST00000391266 104 ntBASIC1.71□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 Y_RNA.596-201ENST00000410462 109 ntBASIC1.71□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.71□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 AC245517.4-201ENST00000448601 281 ntBASIC1.71□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-634P-201ENST00000459134 106 ntBASIC1.71□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU7-106P-201ENST00000459514 67 ntBASIC1.71□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 SNORA4-201ENST00000584302 138 ntBASIC1.71□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 AP000942.3-201ENST00000603702 160 ntBASIC1.71□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 AC012493.3-201ENST00000604494 112 ntBASIC1.71□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 WWP1P1-201ENST00000466609 2769 ntBASIC1.71□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-957P-201ENST00000363652 99 ntBASIC1.7□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNA5SP259-201ENST00000365541 109 ntBASIC1.7□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-587P-201ENST00000391282 106 ntBASIC1.7□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNA5SP100-201ENST00000410903 110 ntBASIC1.7□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNA5SP59-201ENST00000410922 110 ntBASIC1.7□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 AC244636.1-201ENST00000421152 228 ntBASIC1.7□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-531P-201ENST00000516694 104 ntBASIC1.7□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-922P-201ENST00000516753 99 ntBASIC1.7□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.7□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.7□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.7□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.7□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 Y_RNA.12-201ENST00000362393 112 ntBASIC1.69□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 Y_RNA.386-201ENST00000383913 105 ntBASIC1.69□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 MIR154-201ENST00000385243 84 ntBASIC1.69□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 SNORA67.5-201ENST00000391036 107 ntBASIC1.69□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNA5SP212-201ENST00000391223 107 ntBASIC1.69□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 MIR3192-201ENST00000584920 77 ntBASIC1.69□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 SNORD92-201ENST00000585078 85 ntBASIC1.69□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 MIR1297-201ENST00000637311 77 ntBASIC1.69□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 ZNF209P-201ENST00000593450 2304 ntBASIC1.68□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 MIR30D-201ENST00000362283 70 ntBASIC1.68□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.68□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 Y_RNA.264-201ENST00000364665 102 ntBASIC1.68□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-540P-201ENST00000384622 101 ntBASIC1.68□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-1165P-201ENST00000410119 107 ntBASIC1.68□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 AC004965.1-201ENST00000413033 213 ntBASIC1.68□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 AL603825.1-201ENST00000438481 80 ntBASIC1.68□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 SNORA25.16-201ENST00000516741 121 ntBASIC1.68□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-303P-201ENST00000517091 106 ntBASIC1.68□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 uc_338.6-201ENST00000613544 171 ntBASIC1.68□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU5F-1-201ENST00000362507 117 ntBASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-330P-201ENST00000363015 107 ntBASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNA5SP48-201ENST00000363969 126 ntBASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 Y_RNA.205-201ENST00000364128 113 ntBASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 SNORA8.1-201ENST00000384250 140 ntBASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-800P-201ENST00000384473 103 ntBASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-1241P-201ENST00000384536 107 ntBASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU2-59P-201ENST00000410482 191 ntBASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 SNORD63B-201ENST00000411005 70 ntBASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 snoU13.17-201ENST00000458802 104 ntBASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU7-62P-201ENST00000458856 62 ntBASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-947P-201ENST00000516264 106 ntBASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 AL357312.1-201ENST00000603879 298 ntBASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 U1.36-201ENST00000620684 176 ntBASIC1.67□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 SNORD115-31-201ENST00000365318 82 ntBASIC1.66□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-396P-201ENST00000365369 105 ntBASIC1.66□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 Y_RNA.371-201ENST00000365591 113 ntBASIC1.66□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 MIR563-201ENST00000385080 79 ntBASIC1.66□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 MIR520H-201ENST00000385126 88 ntBASIC1.66□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 MIR653-201ENST00000385279 96 ntBASIC1.66□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-360P-201ENST00000390944 104 ntBASIC1.66□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 MIR1302-7-201ENST00000408841 72 ntBASIC1.66□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 AC108667.1-201ENST00000428618 249 ntBASIC1.66□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 U6.111-201ENST00000636093 83 ntBASIC1.66□□□□□ -2.14
C1QTNF3-AMACRE9PGA6 RNU6-403P-201ENST00000363163 104 ntBASIC1.65□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MIR513A1-201ENST00000385138 129 ntBASIC1.65□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 SNORD41-201ENST00000386967 70 ntBASIC1.65□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 RNU6-663P-201ENST00000391105 106 ntBASIC1.65□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 SNORD93-201ENST00000408813 74 ntBASIC1.65□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 SNORD53B-201ENST00000577887 78 ntBASIC1.65□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MIR518E-201ENST00000385252 88 ntBASIC1.64□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 RNA5SP95-201ENST00000410319 137 ntBASIC1.64□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 AC074348.1-201ENST00000426503 132 ntBASIC1.64□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 RNU7-195P-201ENST00000458793 62 ntBASIC1.64□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 YWHAEP2-201ENST00000580066 112 ntBASIC1.64□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MIR4491-201ENST00000581087 68 ntBASIC1.64□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 YWHAEP3-201ENST00000582767 121 ntBASIC1.64□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.64□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 RNU4-58P-201ENST00000363192 141 ntBASIC1.63□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 RNU6-53P-201ENST00000365367 106 ntBASIC1.63□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MIR194-1-201ENST00000384892 85 ntBASIC1.63□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 SNORA17.3-201ENST00000391159 129 ntBASIC1.63□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 AL606490.4-201ENST00000423117 127 ntBASIC1.63□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MIR4713-201ENST00000582691 75 ntBASIC1.63□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MIR4264-201ENST00000583520 66 ntBASIC1.63□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.63□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 MIR337-201ENST00000362281 93 ntBASIC1.62□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 Y_RNA.207-201ENST00000364142 106 ntBASIC1.62□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 RNU6-1051P-201ENST00000365471 102 ntBASIC1.62□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 RNU6-439P-201ENST00000384188 106 ntBASIC1.62□□□□□ -2.15
C1QTNF3-AMACRE9PGA6 TRAJ51-201ENST00000504127 63 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 302.3 ms