Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNU6-1061P-201ENST00000516530 99 ntBASIC0.33□□□□□ -2.36
TRIM49D1C9J1S8 RNU6-765P-201ENST00000516916 99 ntBASIC0.33□□□□□ -2.36
TRIM49D1C9J1S8 AP003327.1-201ENST00000529684 127 ntBASIC0.33□□□□□ -2.36
TRIM49D1C9J1S8 MIR4500-201ENST00000579472 76 ntBASIC0.33□□□□□ -2.36
TRIM49D1C9J1S8 U7.2-201ENST00000607576 63 ntBASIC0.33□□□□□ -2.36
TRIM49D1C9J1S8 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
TRIM49D1C9J1S8 SNORD114-10-201ENST00000363409 72 ntBASIC0.32□□□□□ -2.36
TRIM49D1C9J1S8 SNORD58C-201ENST00000365223 64 ntBASIC0.32□□□□□ -2.36
TRIM49D1C9J1S8 MIRLET7F2-201ENST00000385277 83 ntBASIC0.32□□□□□ -2.36
TRIM49D1C9J1S8 Y_RNA.586-201ENST00000391146 98 ntBASIC0.32□□□□□ -2.36
TRIM49D1C9J1S8 AC069271.1-201ENST00000445577 156 ntBASIC0.32□□□□□ -2.36
TRIM49D1C9J1S8 RNU7-48P-201ENST00000458875 63 ntBASIC0.32□□□□□ -2.36
TRIM49D1C9J1S8 RNU7-2P-201ENST00000516096 62 ntBASIC0.32□□□□□ -2.36
TRIM49D1C9J1S8 AL035470.1-201ENST00000622571 220 ntBASIC0.32□□□□□ -2.36
TRIM49D1C9J1S8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.31□□□□□ -2.36
TRIM49D1C9J1S8 Y_RNA.528-201ENST00000384575 108 ntBASIC0.31□□□□□ -2.36
TRIM49D1C9J1S8 RNU6-893P-201ENST00000458841 100 ntBASIC0.31□□□□□ -2.36
TRIM49D1C9J1S8 RNU6-1232P-201ENST00000516299 86 ntBASIC0.31□□□□□ -2.36
TRIM49D1C9J1S8 RNU6-521P-201ENST00000516663 105 ntBASIC0.31□□□□□ -2.36
TRIM49D1C9J1S8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.31□□□□□ -2.36
TRIM49D1C9J1S8 RNU1-29P-201ENST00000606574 126 ntBASIC0.31□□□□□ -2.36
TRIM49D1C9J1S8 MIR6755-201ENST00000619993 66 ntBASIC0.31□□□□□ -2.36
TRIM49D1C9J1S8 AC244669.1-204ENST00000621564 178 ntBASIC0.31□□□□□ -2.36
TRIM49D1C9J1S8 AC010487.4-201ENST00000637027 61 ntBASIC0.31□□□□□ -2.36
TRIM49D1C9J1S8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
TRIM49D1C9J1S8 Y_RNA.49-201ENST00000362714 112 ntBASIC0.3□□□□□ -2.36
TRIM49D1C9J1S8 Y_RNA.127-201ENST00000363386 109 ntBASIC0.3□□□□□ -2.36
TRIM49D1C9J1S8 RNU6-716P-201ENST00000365621 103 ntBASIC0.3□□□□□ -2.36
TRIM49D1C9J1S8 Y_RNA.549-201ENST00000384657 102 ntBASIC0.3□□□□□ -2.36
TRIM49D1C9J1S8 SNORD28-201ENST00000384706 75 ntBASIC0.3□□□□□ -2.36
TRIM49D1C9J1S8 MIR518A1-201ENST00000385068 85 ntBASIC0.3□□□□□ -2.36
TRIM49D1C9J1S8 SNORA7.5-201ENST00000410672 110 ntBASIC0.3□□□□□ -2.36
TRIM49D1C9J1S8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.3□□□□□ -2.36
TRIM49D1C9J1S8 SNORD33.1-201ENST00000516213 88 ntBASIC0.3□□□□□ -2.36
TRIM49D1C9J1S8 RNA5SP47-201ENST00000517230 109 ntBASIC0.3□□□□□ -2.36
TRIM49D1C9J1S8 RNU7-161P-201ENST00000517289 62 ntBASIC0.3□□□□□ -2.36
TRIM49D1C9J1S8 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.3□□□□□ -2.36
TRIM49D1C9J1S8 SNORD115-19-201ENST00000363098 82 ntBASIC0.29□□□□□ -2.36
TRIM49D1C9J1S8 RNU4-58P-201ENST00000363192 141 ntBASIC0.29□□□□□ -2.36
TRIM49D1C9J1S8 SNORD44.1-201ENST00000363202 61 ntBASIC0.29□□□□□ -2.36
TRIM49D1C9J1S8 SNORD115-18-201ENST00000363293 82 ntBASIC0.29□□□□□ -2.36
TRIM49D1C9J1S8 SNORD118-201ENST00000363593 134 ntBASIC0.29□□□□□ -2.36
TRIM49D1C9J1S8 SNORD115-17-201ENST00000364612 82 ntBASIC0.29□□□□□ -2.36
TRIM49D1C9J1S8 SNORD115-35-201ENST00000365122 82 ntBASIC0.29□□□□□ -2.36
TRIM49D1C9J1S8 Y_RNA.328-201ENST00000365208 113 ntBASIC0.29□□□□□ -2.36
TRIM49D1C9J1S8 RN7SKP12-201ENST00000516275 143 ntBASIC0.29□□□□□ -2.36
TRIM49D1C9J1S8 RNA5SP268-201ENST00000516828 124 ntBASIC0.29□□□□□ -2.36
TRIM49D1C9J1S8 TUG1_4.1-201ENST00000619464 181 ntBASIC0.29□□□□□ -2.36
TRIM49D1C9J1S8 MTND5P18-201ENST00000445624 1801 ntBASIC0.29□□□□□ -2.36
TRIM49D1C9J1S8 SNORD115-24-201ENST00000363528 82 ntBASIC0.28□□□□□ -2.36
TRIM49D1C9J1S8 Y_RNA.198-201ENST00000364013 98 ntBASIC0.28□□□□□ -2.36
TRIM49D1C9J1S8 RNU6-647P-201ENST00000364243 107 ntBASIC0.28□□□□□ -2.36
TRIM49D1C9J1S8 RNY1P5-201ENST00000383890 115 ntBASIC0.28□□□□□ -2.36
TRIM49D1C9J1S8 MIR193B-201ENST00000384907 83 ntBASIC0.28□□□□□ -2.36
TRIM49D1C9J1S8 MIR548D2-201ENST00000384955 97 ntBASIC0.28□□□□□ -2.36
TRIM49D1C9J1S8 MIR7-2-201ENST00000384970 110 ntBASIC0.28□□□□□ -2.36
TRIM49D1C9J1S8 SNORA40.8-201ENST00000411034 126 ntBASIC0.28□□□□□ -2.36
TRIM49D1C9J1S8 AL161932.1-201ENST00000437408 146 ntBASIC0.28□□□□□ -2.36
TRIM49D1C9J1S8 SNRPGP12-201ENST00000449481 213 ntBASIC0.28□□□□□ -2.36
TRIM49D1C9J1S8 RNU7-106P-201ENST00000459514 67 ntBASIC0.28□□□□□ -2.36
TRIM49D1C9J1S8 RNU6-863P-201ENST00000515989 104 ntBASIC0.28□□□□□ -2.36
TRIM49D1C9J1S8 RNU6-1006P-201ENST00000516998 103 ntBASIC0.28□□□□□ -2.36
TRIM49D1C9J1S8 AC025166.1-201ENST00000612411 163 ntBASIC0.28□□□□□ -2.36
TRIM49D1C9J1S8 MIR6779-201ENST00000617283 64 ntBASIC0.28□□□□□ -2.36
TRIM49D1C9J1S8 Y_RNA.221-201ENST00000364248 96 ntBASIC0.27□□□□□ -2.37
TRIM49D1C9J1S8 RNU6-815P-201ENST00000384080 113 ntBASIC0.27□□□□□ -2.37
TRIM49D1C9J1S8 SNORA40-201ENST00000388090 126 ntBASIC0.27□□□□□ -2.37
TRIM49D1C9J1S8 SNORD77B-201ENST00000391112 67 ntBASIC0.27□□□□□ -2.37
TRIM49D1C9J1S8 RNU7-195P-201ENST00000458793 62 ntBASIC0.27□□□□□ -2.37
TRIM49D1C9J1S8 MIR101-2-201ENST00000362195 79 ntBASIC0.26□□□□□ -2.37
TRIM49D1C9J1S8 Y_RNA.205-201ENST00000364128 113 ntBASIC0.26□□□□□ -2.37
TRIM49D1C9J1S8 RNU6-865P-201ENST00000364772 107 ntBASIC0.26□□□□□ -2.37
TRIM49D1C9J1S8 RNU7-104P-201ENST00000459398 79 ntBASIC0.26□□□□□ -2.37
TRIM49D1C9J1S8 RNU6-469P-201ENST00000516253 101 ntBASIC0.26□□□□□ -2.37
TRIM49D1C9J1S8 SCARNA16.5-201ENST00000517114 183 ntBASIC0.26□□□□□ -2.37
TRIM49D1C9J1S8 MIR3163-201ENST00000581592 73 ntBASIC0.26□□□□□ -2.37
TRIM49D1C9J1S8 AP001362.1-201ENST00000625165 124 ntBASIC0.26□□□□□ -2.37
TRIM49D1C9J1S8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.26□□□□□ -2.37
TRIM49D1C9J1S8 MIR6828-201ENST00000636181 60 ntBASIC0.26□□□□□ -2.37
TRIM49D1C9J1S8 Y_RNA.261-201ENST00000364631 102 ntBASIC0.25□□□□□ -2.37
TRIM49D1C9J1S8 Y_RNA.299-201ENST00000364973 94 ntBASIC0.25□□□□□ -2.37
TRIM49D1C9J1S8 Y_RNA.360-201ENST00000365512 102 ntBASIC0.25□□□□□ -2.37
TRIM49D1C9J1S8 Y_RNA.362-201ENST00000365518 110 ntBASIC0.25□□□□□ -2.37
TRIM49D1C9J1S8 Y_RNA.423-201ENST00000384057 113 ntBASIC0.25□□□□□ -2.37
TRIM49D1C9J1S8 MIR759-201ENST00000390224 91 ntBASIC0.25□□□□□ -2.37
TRIM49D1C9J1S8 SNORD63B-201ENST00000411005 70 ntBASIC0.25□□□□□ -2.37
TRIM49D1C9J1S8 RNA5SP227-201ENST00000516184 113 ntBASIC0.25□□□□□ -2.37
TRIM49D1C9J1S8 MIR1273G-201ENST00000577677 100 ntBASIC0.25□□□□□ -2.37
TRIM49D1C9J1S8 MIR3613-201ENST00000579844 87 ntBASIC0.25□□□□□ -2.37
TRIM49D1C9J1S8 SNORA70.25-201ENST00000612741 95 ntBASIC0.25□□□□□ -2.37
TRIM49D1C9J1S8 Y_RNA.71-201ENST00000362892 104 ntBASIC0.24□□□□□ -2.37
TRIM49D1C9J1S8 RNU4-67P-201ENST00000364569 141 ntBASIC0.24□□□□□ -2.37
TRIM49D1C9J1S8 Y_RNA.343-201ENST00000365354 112 ntBASIC0.24□□□□□ -2.37
TRIM49D1C9J1S8 RNU6-429P-201ENST00000384582 108 ntBASIC0.24□□□□□ -2.37
TRIM49D1C9J1S8 MIR516A2-201ENST00000384888 90 ntBASIC0.24□□□□□ -2.37
TRIM49D1C9J1S8 MIR516A1-201ENST00000385033 90 ntBASIC0.24□□□□□ -2.37
TRIM49D1C9J1S8 MIR599-201ENST00000385069 95 ntBASIC0.24□□□□□ -2.37
TRIM49D1C9J1S8 AC244505.6-201ENST00000452829 130 ntBASIC0.24□□□□□ -2.37
TRIM49D1C9J1S8 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
TRIM49D1C9J1S8 Y_RNA.703-201ENST00000516846 111 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms