Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 RNU6-764P-201ENST00000516396 105 ntBASIC-2.23□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.691-201ENST00000516611 103 ntBASIC-2.23□□□□□ -2.77
CPSF4LA6NMK7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.23□□□□□ -2.77
CPSF4LA6NMK7 AC073114.1-201ENST00000612027 490 ntBASIC-2.23□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.173-201ENST00000363776 113 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 SNORA33.1-201ENST00000364957 130 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 RNY3-201ENST00000365484 102 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.418-201ENST00000384029 102 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 SNORD77B-201ENST00000391112 67 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.594-201ENST00000410373 140 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 RNU6-1068P-201ENST00000410958 103 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.622-201ENST00000411091 108 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 RNU6-118P-201ENST00000516552 102 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 RNU6-358P-201ENST00000516564 75 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 IGHVII-40-1-201ENST00000517316 58 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 MIR548AM-201ENST00000584298 74 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 AC103591.3-201ENST00000608684 209 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.24□□□□□ -2.77
CPSF4LA6NMK7 RNU6-616P-201ENST00000384353 107 ntBASIC-2.25□□□□□ -2.77
CPSF4LA6NMK7 RNU6-1088P-201ENST00000516850 104 ntBASIC-2.25□□□□□ -2.77
CPSF4LA6NMK7 MIR3123-201ENST00000583417 75 ntBASIC-2.25□□□□□ -2.77
CPSF4LA6NMK7 MIR3662-201ENST00000637030 95 ntBASIC-2.25□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.26□□□□□ -2.77
CPSF4LA6NMK7 ELOCP20-201ENST00000422460 345 ntBASIC-2.26□□□□□ -2.77
CPSF4LA6NMK7 PMCHL1-202ENST00000423102 261 ntBASIC-2.26□□□□□ -2.77
CPSF4LA6NMK7 AP003461.1-201ENST00000528866 78 ntBASIC-2.26□□□□□ -2.77
CPSF4LA6NMK7 C8orf59P2-201ENST00000603441 271 ntBASIC-2.26□□□□□ -2.77
CPSF4LA6NMK7 RNU6-1272P-201ENST00000362776 107 ntBASIC-2.27□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.27□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.27□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.424-201ENST00000384063 103 ntBASIC-2.27□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.27□□□□□ -2.77
CPSF4LA6NMK7 SNORD38.2-201ENST00000384470 69 ntBASIC-2.27□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.27□□□□□ -2.77
CPSF4LA6NMK7 MIR181A1-201ENST00000385026 110 ntBASIC-2.27□□□□□ -2.77
CPSF4LA6NMK7 MT-TH-201ENST00000387441 69 ntBASIC-2.27□□□□□ -2.77
CPSF4LA6NMK7 RNU6-864P-201ENST00000516256 108 ntBASIC-2.27□□□□□ -2.77
CPSF4LA6NMK7 AL512360.1-201ENST00000555346 234 ntBASIC-2.27□□□□□ -2.77
CPSF4LA6NMK7 CYP3A54P-201ENST00000566950 75 ntBASIC-2.27□□□□□ -2.77
CPSF4LA6NMK7 RNU6-1040P-201ENST00000383974 107 ntBASIC-2.28□□□□□ -2.77
CPSF4LA6NMK7 MIR513B-201ENST00000385136 84 ntBASIC-2.28□□□□□ -2.77
CPSF4LA6NMK7 MIR624-201ENST00000385217 97 ntBASIC-2.28□□□□□ -2.77
CPSF4LA6NMK7 RNU6-1052P-201ENST00000411398 104 ntBASIC-2.28□□□□□ -2.77
CPSF4LA6NMK7 RNU6-507P-201ENST00000516045 100 ntBASIC-2.28□□□□□ -2.77
CPSF4LA6NMK7 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.28□□□□□ -2.77
CPSF4LA6NMK7 RNU6-719P-201ENST00000516671 104 ntBASIC-2.28□□□□□ -2.77
CPSF4LA6NMK7 RNU6-1016P-201ENST00000516689 94 ntBASIC-2.28□□□□□ -2.77
CPSF4LA6NMK7 AC022079.1-201ENST00000621546 602 ntBASIC-2.28□□□□□ -2.77
CPSF4LA6NMK7 Y_RNA.24-201ENST00000362508 103 ntBASIC-2.29□□□□□ -2.78
CPSF4LA6NMK7 Y_RNA.813-201ENST00000364639 102 ntBASIC-2.29□□□□□ -2.78
CPSF4LA6NMK7 Y_RNA.286-201ENST00000364813 102 ntBASIC-2.29□□□□□ -2.78
CPSF4LA6NMK7 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.29□□□□□ -2.78
CPSF4LA6NMK7 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.29□□□□□ -2.78
CPSF4LA6NMK7 MIR548A1-201ENST00000385041 97 ntBASIC-2.29□□□□□ -2.78
CPSF4LA6NMK7 MT-TT-201ENST00000387460 66 ntBASIC-2.29□□□□□ -2.78
CPSF4LA6NMK7 RNU6-1050P-201ENST00000410388 107 ntBASIC-2.29□□□□□ -2.78
CPSF4LA6NMK7 RNU2-72P-201ENST00000411175 163 ntBASIC-2.29□□□□□ -2.78
CPSF4LA6NMK7 MTND1P1-201ENST00000445453 368 ntBASIC-2.29□□□□□ -2.78
CPSF4LA6NMK7 FGF7P7-201ENST00000514120 227 ntBASIC-2.29□□□□□ -2.78
CPSF4LA6NMK7 RNU6-75P-201ENST00000515944 104 ntBASIC-2.29□□□□□ -2.78
CPSF4LA6NMK7 RNU6-273P-201ENST00000516937 96 ntBASIC-2.29□□□□□ -2.78
CPSF4LA6NMK7 MIR3139-201ENST00000579145 76 ntBASIC-2.29□□□□□ -2.78
CPSF4LA6NMK7 RNU6-194P-201ENST00000363862 105 ntBASIC-2.3□□□□□ -2.78
CPSF4LA6NMK7 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.3□□□□□ -2.78
CPSF4LA6NMK7 RNU6-690P-201ENST00000365242 106 ntBASIC-2.3□□□□□ -2.78
CPSF4LA6NMK7 SNORD63-201ENST00000384262 68 ntBASIC-2.3□□□□□ -2.78
CPSF4LA6NMK7 Y_RNA.560-201ENST00000384689 102 ntBASIC-2.3□□□□□ -2.78
CPSF4LA6NMK7 Y_RNA.577-201ENST00000384794 101 ntBASIC-2.3□□□□□ -2.78
CPSF4LA6NMK7 RNU7-88P-201ENST00000458752 63 ntBASIC-2.3□□□□□ -2.78
CPSF4LA6NMK7 RNU7-24P-201ENST00000458867 62 ntBASIC-2.3□□□□□ -2.78
CPSF4LA6NMK7 U7.5-201ENST00000517224 61 ntBASIC-2.3□□□□□ -2.78
CPSF4LA6NMK7 AC006006.1-201ENST00000603082 144 ntBASIC-2.3□□□□□ -2.78
CPSF4LA6NMK7 Y_RNA.169-201ENST00000363745 96 ntBASIC-2.31□□□□□ -2.78
CPSF4LA6NMK7 Y_RNA.222-201ENST00000364264 102 ntBASIC-2.31□□□□□ -2.78
CPSF4LA6NMK7 RNU6-246P-201ENST00000384702 107 ntBASIC-2.31□□□□□ -2.78
CPSF4LA6NMK7 RNY3P10-201ENST00000384764 102 ntBASIC-2.31□□□□□ -2.78
CPSF4LA6NMK7 MIR519A2-201ENST00000384990 87 ntBASIC-2.31□□□□□ -2.78
CPSF4LA6NMK7 Y_RNA.599-201ENST00000410489 109 ntBASIC-2.31□□□□□ -2.78
CPSF4LA6NMK7 snoU13.17-201ENST00000458802 104 ntBASIC-2.31□□□□□ -2.78
CPSF4LA6NMK7 RNU7-123P-201ENST00000515911 60 ntBASIC-2.31□□□□□ -2.78
CPSF4LA6NMK7 RNU6-566P-201ENST00000516790 107 ntBASIC-2.31□□□□□ -2.78
CPSF4LA6NMK7 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.31□□□□□ -2.78
CPSF4LA6NMK7 RNY3P11-201ENST00000364153 102 ntBASIC-2.32□□□□□ -2.78
CPSF4LA6NMK7 Y_RNA.404-201ENST00000383978 102 ntBASIC-2.32□□□□□ -2.78
CPSF4LA6NMK7 RNU4-88P-201ENST00000411220 86 ntBASIC-2.32□□□□□ -2.78
CPSF4LA6NMK7 Z83846.1-201ENST00000446798 265 ntBASIC-2.32□□□□□ -2.78
CPSF4LA6NMK7 MTND2P14-201ENST00000482139 351 ntBASIC-2.32□□□□□ -2.78
CPSF4LA6NMK7 MIR4509-3-201ENST00000578671 94 ntBASIC-2.32□□□□□ -2.78
CPSF4LA6NMK7 MIR4509-2-201ENST00000583920 94 ntBASIC-2.32□□□□□ -2.78
CPSF4LA6NMK7 MIR4509-1-201ENST00000618224 94 ntBASIC-2.32□□□□□ -2.78
CPSF4LA6NMK7 AC090617.10-201ENST00000624308 134 ntBASIC-2.32□□□□□ -2.78
CPSF4LA6NMK7 AP000720.1-201ENST00000625091 483 ntBASIC-2.32□□□□□ -2.78
CPSF4LA6NMK7 RNU6-978P-201ENST00000364371 103 ntBASIC-2.33□□□□□ -2.78
CPSF4LA6NMK7 SNORA24B-201ENST00000384176 131 ntBASIC-2.33□□□□□ -2.78
CPSF4LA6NMK7 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.33□□□□□ -2.78
CPSF4LA6NMK7 MIR1207-201ENST00000408249 87 ntBASIC-2.33□□□□□ -2.78
CPSF4LA6NMK7 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.33□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms