Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 YWHAEP3-201ENST00000582767 121 ntBASIC2.25□□□□□ -2.05
SPDYE3A6NKU9 uc_338.20-201ENST00000621563 178 ntBASIC2.25□□□□□ -2.05
SPDYE3A6NKU9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.24□□□□□ -2.05
SPDYE3A6NKU9 Y_RNA.207-201ENST00000364142 106 ntBASIC2.24□□□□□ -2.05
SPDYE3A6NKU9 RNU6-1051P-201ENST00000365471 102 ntBASIC2.24□□□□□ -2.05
SPDYE3A6NKU9 RNA5SP212-201ENST00000391223 107 ntBASIC2.24□□□□□ -2.05
SPDYE3A6NKU9 AC004965.1-201ENST00000413033 213 ntBASIC2.24□□□□□ -2.05
SPDYE3A6NKU9 RNU7-62P-201ENST00000458856 62 ntBASIC2.24□□□□□ -2.05
SPDYE3A6NKU9 MIR5089-201ENST00000580047 84 ntBASIC2.24□□□□□ -2.05
SPDYE3A6NKU9 AC005520.4-201ENST00000604337 90 ntBASIC2.24□□□□□ -2.05
SPDYE3A6NKU9 Y_RNA.36-201ENST00000362602 112 ntBASIC2.23□□□□□ -2.05
SPDYE3A6NKU9 RNA5SP48-201ENST00000363969 126 ntBASIC2.23□□□□□ -2.05
SPDYE3A6NKU9 RNU6-439P-201ENST00000384188 106 ntBASIC2.23□□□□□ -2.05
SPDYE3A6NKU9 Y_RNA.588-201ENST00000391254 102 ntBASIC2.23□□□□□ -2.05
SPDYE3A6NKU9 MIR1289-2-201ENST00000408360 111 ntBASIC2.23□□□□□ -2.05
SPDYE3A6NKU9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.23□□□□□ -2.05
SPDYE3A6NKU9 TRAJ51-201ENST00000504127 63 ntBASIC2.23□□□□□ -2.05
SPDYE3A6NKU9 RNU6-322P-201ENST00000516010 103 ntBASIC2.23□□□□□ -2.05
SPDYE3A6NKU9 AL357312.1-201ENST00000603879 298 ntBASIC2.23□□□□□ -2.05
SPDYE3A6NKU9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SPDYE3A6NKU9 RNU6-654P-201ENST00000364373 107 ntBASIC2.22□□□□□ -2.05
SPDYE3A6NKU9 SNORD45A-201ENST00000384512 84 ntBASIC2.22□□□□□ -2.05
SPDYE3A6NKU9 RNU11-2P-201ENST00000516898 142 ntBASIC2.22□□□□□ -2.05
SPDYE3A6NKU9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.22□□□□□ -2.05
SPDYE3A6NKU9 AL359851.1-201ENST00000569460 4997 ntBASIC2.22□□□□□ -2.05
SPDYE3A6NKU9 RNU6-396P-201ENST00000365369 105 ntBASIC2.21□□□□□ -2.06
SPDYE3A6NKU9 RNU6-291P-201ENST00000384720 107 ntBASIC2.21□□□□□ -2.06
SPDYE3A6NKU9 RNU6-987P-201ENST00000384759 104 ntBASIC2.21□□□□□ -2.06
SPDYE3A6NKU9 MIR942-201ENST00000401111 86 ntBASIC2.21□□□□□ -2.06
SPDYE3A6NKU9 SNORD100-201ENST00000408573 76 ntBASIC2.21□□□□□ -2.06
SPDYE3A6NKU9 RNU6-1194P-201ENST00000516208 104 ntBASIC2.21□□□□□ -2.06
SPDYE3A6NKU9 SNRPGP19-201ENST00000603826 189 ntBASIC2.21□□□□□ -2.06
SPDYE3A6NKU9 AL773524.1-201ENST00000614065 229 ntBASIC2.21□□□□□ -2.06
SPDYE3A6NKU9 AC023934.1-201ENST00000574529 2389 ntBASIC2.2□□□□□ -2.06
SPDYE3A6NKU9 RNU6-403P-201ENST00000363163 104 ntBASIC2.2□□□□□ -2.06
SPDYE3A6NKU9 RNU6-471P-201ENST00000383944 106 ntBASIC2.2□□□□□ -2.06
SPDYE3A6NKU9 MIR513A1-201ENST00000385138 129 ntBASIC2.2□□□□□ -2.06
SPDYE3A6NKU9 AL161935.2-201ENST00000414627 60 ntBASIC2.2□□□□□ -2.06
SPDYE3A6NKU9 RNU6-947P-201ENST00000516264 106 ntBASIC2.2□□□□□ -2.06
SPDYE3A6NKU9 TRDV1-202ENST00000621643 102 ntBASIC2.2□□□□□ -2.06
SPDYE3A6NKU9 MIR6516-201ENST00000630554 81 ntBASIC2.2□□□□□ -2.06
SPDYE3A6NKU9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
SPDYE3A6NKU9 RNU6-340P-201ENST00000364005 107 ntBASIC2.19□□□□□ -2.06
SPDYE3A6NKU9 MIR583-201ENST00000384846 75 ntBASIC2.19□□□□□ -2.06
SPDYE3A6NKU9 SNORD93-201ENST00000408813 74 ntBASIC2.19□□□□□ -2.06
SPDYE3A6NKU9 RNU4-37P-201ENST00000410214 84 ntBASIC2.19□□□□□ -2.06
SPDYE3A6NKU9 AC092628.1-201ENST00000436250 252 ntBASIC2.19□□□□□ -2.06
SPDYE3A6NKU9 JTBP1-201ENST00000441314 247 ntBASIC2.19□□□□□ -2.06
SPDYE3A6NKU9 RPL23AP42-201ENST00000471152 471 ntBASIC2.19□□□□□ -2.06
SPDYE3A6NKU9 RNA5SP182-201ENST00000516064 82 ntBASIC2.19□□□□□ -2.06
SPDYE3A6NKU9 MIR4264-201ENST00000583520 66 ntBASIC2.19□□□□□ -2.06
SPDYE3A6NKU9 AC013244.2-201ENST00000603396 103 ntBASIC2.19□□□□□ -2.06
SPDYE3A6NKU9 AL627230.6-201ENST00000611129 280 ntBASIC2.19□□□□□ -2.06
SPDYE3A6NKU9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.19□□□□□ -2.06
SPDYE3A6NKU9 U6.100-201ENST00000636230 99 ntBASIC2.19□□□□□ -2.06
SPDYE3A6NKU9 Y_RNA.42-201ENST00000362660 108 ntBASIC2.18□□□□□ -2.06
SPDYE3A6NKU9 Y_RNA.536-201ENST00000384621 113 ntBASIC2.18□□□□□ -2.06
SPDYE3A6NKU9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SPDYE3A6NKU9 RNU6-630P-201ENST00000391258 106 ntBASIC2.18□□□□□ -2.06
SPDYE3A6NKU9 RNU6-1052P-201ENST00000411398 104 ntBASIC2.18□□□□□ -2.06
SPDYE3A6NKU9 AC244636.1-201ENST00000421152 228 ntBASIC2.18□□□□□ -2.06
SPDYE3A6NKU9 snoU13.21-201ENST00000459368 105 ntBASIC2.18□□□□□ -2.06
SPDYE3A6NKU9 RNU6-719P-201ENST00000516671 104 ntBASIC2.18□□□□□ -2.06
SPDYE3A6NKU9 RNA5SP364-201ENST00000516938 78 ntBASIC2.18□□□□□ -2.06
SPDYE3A6NKU9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.18□□□□□ -2.06
SPDYE3A6NKU9 RNU4-58P-201ENST00000363192 141 ntBASIC2.17□□□□□ -2.06
SPDYE3A6NKU9 RNU6-1054P-201ENST00000411293 104 ntBASIC2.17□□□□□ -2.06
SPDYE3A6NKU9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.17□□□□□ -2.06
SPDYE3A6NKU9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SPDYE3A6NKU9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SPDYE3A6NKU9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SPDYE3A6NKU9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.17□□□□□ -2.06
SPDYE3A6NKU9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SPDYE3A6NKU9 RNA5SP432-201ENST00000362480 116 ntBASIC2.16□□□□□ -2.06
SPDYE3A6NKU9 RNU1-36P-201ENST00000365130 165 ntBASIC2.16□□□□□ -2.06
SPDYE3A6NKU9 MIR1185-1-201ENST00000408598 86 ntBASIC2.16□□□□□ -2.06
SPDYE3A6NKU9 RNU6-295P-201ENST00000516901 104 ntBASIC2.16□□□□□ -2.06
SPDYE3A6NKU9 MIR4696-201ENST00000581431 70 ntBASIC2.16□□□□□ -2.06
SPDYE3A6NKU9 AC012493.3-201ENST00000604494 112 ntBASIC2.16□□□□□ -2.06
SPDYE3A6NKU9 MIR7843-201ENST00000622274 79 ntBASIC2.16□□□□□ -2.06
SPDYE3A6NKU9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SPDYE3A6NKU9 MT-TF-201ENST00000387314 71 ntBASIC2.15□□□□□ -2.07
SPDYE3A6NKU9 RPL30P7-201ENST00000479312 323 ntBASIC2.15□□□□□ -2.07
SPDYE3A6NKU9 MIR4287-201ENST00000579398 78 ntBASIC2.15□□□□□ -2.07
SPDYE3A6NKU9 MIR4524B-201ENST00000581569 115 ntBASIC2.15□□□□□ -2.07
SPDYE3A6NKU9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
SPDYE3A6NKU9 RNU6-824P-201ENST00000363724 104 ntBASIC2.14□□□□□ -2.07
SPDYE3A6NKU9 Y_RNA.239-201ENST00000364444 113 ntBASIC2.14□□□□□ -2.07
SPDYE3A6NKU9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SPDYE3A6NKU9 AL356379.1-201ENST00000414105 126 ntBASIC2.14□□□□□ -2.07
SPDYE3A6NKU9 RN7SL274P-201ENST00000492268 272 ntBASIC2.14□□□□□ -2.07
SPDYE3A6NKU9 Y_RNA.809-201ENST00000516058 95 ntBASIC2.14□□□□□ -2.07
SPDYE3A6NKU9 SNORA77B-201ENST00000578179 125 ntBASIC2.14□□□□□ -2.07
SPDYE3A6NKU9 MIR6845-201ENST00000613182 61 ntBASIC2.14□□□□□ -2.07
SPDYE3A6NKU9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SPDYE3A6NKU9 AL109933.3-201ENST00000619095 188 ntBASIC2.14□□□□□ -2.07
SPDYE3A6NKU9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SPDYE3A6NKU9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SPDYE3A6NKU9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SPDYE3A6NKU9 RNU6-53P-201ENST00000365367 106 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 329.7 ms