Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-4.28□□□□□ -3.09
LINC01549A6NIU2 RNU5F-7P-201ENST00000363696 115 ntBASIC-4.29□□□□□ -3.1
LINC01549A6NIU2 RNU6-1152P-201ENST00000384576 107 ntBASIC-4.29□□□□□ -3.1
LINC01549A6NIU2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-4.29□□□□□ -3.1
LINC01549A6NIU2 RNU6-1248P-201ENST00000391096 64 ntBASIC-4.29□□□□□ -3.1
LINC01549A6NIU2 Y_RNA.793-201ENST00000411222 111 ntBASIC-4.29□□□□□ -3.1
LINC01549A6NIU2 snoU13.17-201ENST00000458802 104 ntBASIC-4.29□□□□□ -3.1
LINC01549A6NIU2 IGHVII-40-1-201ENST00000517316 58 ntBASIC-4.29□□□□□ -3.1
LINC01549A6NIU2 AL138825.1-201ENST00000618587 192 ntBASIC-4.29□□□□□ -3.1
LINC01549A6NIU2 RNU6-157P-201ENST00000383957 107 ntBASIC-4.3□□□□□ -3.1
LINC01549A6NIU2 RNU2-38P-201ENST00000410856 79 ntBASIC-4.3□□□□□ -3.1
LINC01549A6NIU2 SNRPGP8-201ENST00000454064 226 ntBASIC-4.3□□□□□ -3.1
LINC01549A6NIU2 SNORA19.3-201ENST00000516165 130 ntBASIC-4.3□□□□□ -3.1
LINC01549A6NIU2 AC005014.2-201ENST00000607795 599 ntBASIC-4.3□□□□□ -3.1
LINC01549A6NIU2 RNU6-306P-201ENST00000384617 107 ntBASIC-4.31□□□□□ -3.1
LINC01549A6NIU2 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-4.31□□□□□ -3.1
LINC01549A6NIU2 RNU6-630P-201ENST00000391258 106 ntBASIC-4.31□□□□□ -3.1
LINC01549A6NIU2 snoU13.10-201ENST00000459301 103 ntBASIC-4.31□□□□□ -3.1
LINC01549A6NIU2 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-4.31□□□□□ -3.1
LINC01549A6NIU2 Y_RNA.301-201ENST00000364990 103 ntBASIC-4.32□□□□□ -3.1
LINC01549A6NIU2 SNORD37.1-201ENST00000390968 65 ntBASIC-4.32□□□□□ -3.1
LINC01549A6NIU2 RNU6-101P-201ENST00000410323 104 ntBASIC-4.32□□□□□ -3.1
LINC01549A6NIU2 RNU2-35P-201ENST00000516446 142 ntBASIC-4.32□□□□□ -3.1
LINC01549A6NIU2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-4.32□□□□□ -3.1
LINC01549A6NIU2 Y_RNA.204-201ENST00000364112 102 ntBASIC-4.33□□□□□ -3.1
LINC01549A6NIU2 RNU6-260P-201ENST00000384092 107 ntBASIC-4.33□□□□□ -3.1
LINC01549A6NIU2 AC138393.2-201ENST00000414742 246 ntBASIC-4.33□□□□□ -3.1
LINC01549A6NIU2 MTND4P28-201ENST00000426217 387 ntBASIC-4.33□□□□□ -3.1
LINC01549A6NIU2 RNU6-1149P-201ENST00000516810 97 ntBASIC-4.33□□□□□ -3.1
LINC01549A6NIU2 RNU6-1234P-201ENST00000516877 103 ntBASIC-4.33□□□□□ -3.1
LINC01549A6NIU2 RNU6-766P-201ENST00000362478 107 ntBASIC-4.34□□□□□ -3.1
LINC01549A6NIU2 Y_RNA.77-201ENST00000362962 107 ntBASIC-4.34□□□□□ -3.1
LINC01549A6NIU2 Y_RNA.153-201ENST00000363615 91 ntBASIC-4.34□□□□□ -3.1
LINC01549A6NIU2 SNORD115-31-201ENST00000365318 82 ntBASIC-4.34□□□□□ -3.1
LINC01549A6NIU2 Y_RNA.357-201ENST00000365487 109 ntBASIC-4.34□□□□□ -3.1
LINC01549A6NIU2 Y_RNA.443-201ENST00000384135 111 ntBASIC-4.34□□□□□ -3.1
LINC01549A6NIU2 Y_RNA.513-201ENST00000384522 100 ntBASIC-4.34□□□□□ -3.1
LINC01549A6NIU2 SNORD78.2-201ENST00000391076 69 ntBASIC-4.34□□□□□ -3.1
LINC01549A6NIU2 Y_RNA.691-201ENST00000516611 103 ntBASIC-4.34□□□□□ -3.1
LINC01549A6NIU2 RNU6-1192P-201ENST00000612197 107 ntBASIC-4.34□□□□□ -3.1
LINC01549A6NIU2 RNU6-489P-201ENST00000618289 107 ntBASIC-4.34□□□□□ -3.1
LINC01549A6NIU2 RNU6-478P-201ENST00000363904 110 ntBASIC-4.35□□□□□ -3.11
LINC01549A6NIU2 AL593851.1-201ENST00000426171 157 ntBASIC-4.35□□□□□ -3.11
LINC01549A6NIU2 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-4.35□□□□□ -3.11
LINC01549A6NIU2 AL021921.1-201ENST00000442774 93 ntBASIC-4.35□□□□□ -3.11
LINC01549A6NIU2 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-4.35□□□□□ -3.11
LINC01549A6NIU2 MRPS35P2-201ENST00000508242 191 ntBASIC-4.35□□□□□ -3.11
LINC01549A6NIU2 RNA5SP401-201ENST00000515920 127 ntBASIC-4.35□□□□□ -3.11
LINC01549A6NIU2 RNA5SP147-201ENST00000516493 109 ntBASIC-4.35□□□□□ -3.11
LINC01549A6NIU2 PISRT1.1-201ENST00000616930 107 ntBASIC-4.35□□□□□ -3.11
LINC01549A6NIU2 Y_RNA.75-201ENST00000362927 97 ntBASIC-4.36□□□□□ -3.11
LINC01549A6NIU2 Y_RNA.463-201ENST00000384271 102 ntBASIC-4.36□□□□□ -3.11
LINC01549A6NIU2 Y_RNA.701-201ENST00000516812 110 ntBASIC-4.36□□□□□ -3.11
LINC01549A6NIU2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-4.36□□□□□ -3.11
LINC01549A6NIU2 AC013791.1-201ENST00000616619 62 ntBASIC-4.36□□□□□ -3.11
LINC01549A6NIU2 RNU6-1059P-201ENST00000363752 98 ntBASIC-4.37□□□□□ -3.11
LINC01549A6NIU2 Y_RNA.186-201ENST00000363899 92 ntBASIC-4.37□□□□□ -3.11
LINC01549A6NIU2 RNU6-842P-201ENST00000384269 107 ntBASIC-4.37□□□□□ -3.11
LINC01549A6NIU2 RNU6-861P-201ENST00000516745 106 ntBASIC-4.37□□□□□ -3.11
LINC01549A6NIU2 MIR5692C2-201ENST00000577959 77 ntBASIC-4.37□□□□□ -3.11
LINC01549A6NIU2 U6.92-201ENST00000636464 89 ntBASIC-4.37□□□□□ -3.11
LINC01549A6NIU2 Y_RNA.135-201ENST00000363439 95 ntBASIC-4.38□□□□□ -3.11
LINC01549A6NIU2 RNU6-763P-201ENST00000390865 106 ntBASIC-4.38□□□□□ -3.11
LINC01549A6NIU2 RNU6-1177P-201ENST00000391058 104 ntBASIC-4.38□□□□□ -3.11
LINC01549A6NIU2 RNU6-1267P-201ENST00000410747 107 ntBASIC-4.38□□□□□ -3.11
LINC01549A6NIU2 AC097484.2-201ENST00000509147 251 ntBASIC-4.38□□□□□ -3.11
LINC01549A6NIU2 AL132765.2-201ENST00000610812 351 ntBASIC-4.38□□□□□ -3.11
LINC01549A6NIU2 AL359880.1-201ENST00000621879 266 ntBASIC-4.38□□□□□ -3.11
LINC01549A6NIU2 AL606534.2-204ENST00000635008 178 ntBASIC-4.38□□□□□ -3.11
LINC01549A6NIU2 SNORA63.2-201ENST00000362603 126 ntBASIC-4.39□□□□□ -3.11
LINC01549A6NIU2 RNU6-690P-201ENST00000365242 106 ntBASIC-4.39□□□□□ -3.11
LINC01549A6NIU2 RNU6-616P-201ENST00000384353 107 ntBASIC-4.39□□□□□ -3.11
LINC01549A6NIU2 MIR520D-201ENST00000385002 87 ntBASIC-4.39□□□□□ -3.11
LINC01549A6NIU2 AC083904.1-201ENST00000487828 231 ntBASIC-4.39□□□□□ -3.11
LINC01549A6NIU2 AC082651.2-201ENST00000496833 166 ntBASIC-4.39□□□□□ -3.11
LINC01549A6NIU2 RNU6-415P-201ENST00000516252 97 ntBASIC-4.39□□□□□ -3.11
LINC01549A6NIU2 MIR5688-201ENST00000580619 83 ntBASIC-4.39□□□□□ -3.11
LINC01549A6NIU2 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-4.39□□□□□ -3.11
LINC01549A6NIU2 AC092794.2-201ENST00000620933 563 ntBASIC-4.39□□□□□ -3.11
LINC01549A6NIU2 Y_RNA.397-201ENST00000383950 98 ntBASIC-4.4□□□□□ -3.11
LINC01549A6NIU2 MIR526A2-201ENST00000390198 65 ntBASIC-4.4□□□□□ -3.11
LINC01549A6NIU2 HSPE1P25-201ENST00000455484 251 ntBASIC-4.4□□□□□ -3.11
LINC01549A6NIU2 RNU6-864P-201ENST00000516256 108 ntBASIC-4.4□□□□□ -3.11
LINC01549A6NIU2 Y_RNA.159-201ENST00000363674 87 ntBASIC-4.41□□□□□ -3.12
LINC01549A6NIU2 MIR521-2-201ENST00000384818 87 ntBASIC-4.41□□□□□ -3.12
LINC01549A6NIU2 RNU6-1228P-201ENST00000391014 107 ntBASIC-4.41□□□□□ -3.12
LINC01549A6NIU2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-4.41□□□□□ -3.12
LINC01549A6NIU2 MIR548AG1-201ENST00000579932 66 ntBASIC-4.41□□□□□ -3.12
LINC01549A6NIU2 MIR4659A-201ENST00000580269 81 ntBASIC-4.41□□□□□ -3.12
LINC01549A6NIU2 AC090617.10-201ENST00000624308 134 ntBASIC-4.41□□□□□ -3.12
LINC01549A6NIU2 RNU4-68P-201ENST00000364314 141 ntBASIC-4.42□□□□□ -3.12
LINC01549A6NIU2 RNU6-1158P-201ENST00000391167 107 ntBASIC-4.42□□□□□ -3.12
LINC01549A6NIU2 RNU6-75P-201ENST00000515944 104 ntBASIC-4.43□□□□□ -3.12
LINC01549A6NIU2 RNU6-1129P-201ENST00000515964 104 ntBASIC-4.43□□□□□ -3.12
LINC01549A6NIU2 Y_RNA.222-201ENST00000364264 102 ntBASIC-4.44□□□□□ -3.12
LINC01549A6NIU2 Y_RNA.655-201ENST00000515919 96 ntBASIC-4.44□□□□□ -3.12
LINC01549A6NIU2 Y_RNA.82-201ENST00000363000 102 ntBASIC-4.45□□□□□ -3.12
LINC01549A6NIU2 Y_RNA.92-201ENST00000363043 102 ntBASIC-4.45□□□□□ -3.12
LINC01549A6NIU2 Y_RNA.235-201ENST00000364412 102 ntBASIC-4.45□□□□□ -3.12
LINC01549A6NIU2 Y_RNA.306-201ENST00000365015 102 ntBASIC-4.45□□□□□ -3.12
Retrieved 100 of 98,524 protein–RNA pairs in 332.4 ms