Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC243829.3-201ENST00000622177 108 ntBASIC0.47□□□□□ -2.33
PCDHGB3Q9Y5G1 MIR101-2-201ENST00000362195 79 ntBASIC0.46□□□□□ -2.34
PCDHGB3Q9Y5G1 Y_RNA.270-201ENST00000364693 104 ntBASIC0.46□□□□□ -2.34
PCDHGB3Q9Y5G1 RNA5SP517-201ENST00000364724 117 ntBASIC0.46□□□□□ -2.34
PCDHGB3Q9Y5G1 RNA5SP193-201ENST00000410353 107 ntBASIC0.46□□□□□ -2.34
PCDHGB3Q9Y5G1 AC098934.3-201ENST00000430450 190 ntBASIC0.46□□□□□ -2.34
PCDHGB3Q9Y5G1 SNORD67.1-201ENST00000516618 108 ntBASIC0.46□□□□□ -2.34
PCDHGB3Q9Y5G1 Y_RNA.692-201ENST00000516627 105 ntBASIC0.46□□□□□ -2.34
PCDHGB3Q9Y5G1 U6.109-201ENST00000636749 87 ntBASIC0.46□□□□□ -2.34
PCDHGB3Q9Y5G1 MIRLET7D-201ENST00000362263 87 ntBASIC0.45□□□□□ -2.34
PCDHGB3Q9Y5G1 Y_RNA.32-201ENST00000362589 110 ntBASIC0.45□□□□□ -2.34
PCDHGB3Q9Y5G1 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
PCDHGB3Q9Y5G1 RNU6-309P-201ENST00000364573 106 ntBASIC0.45□□□□□ -2.34
PCDHGB3Q9Y5G1 SNORD116-18-201ENST00000383961 92 ntBASIC0.45□□□□□ -2.34
PCDHGB3Q9Y5G1 SNORA8.2-201ENST00000384372 139 ntBASIC0.45□□□□□ -2.34
PCDHGB3Q9Y5G1 RNU6-291P-201ENST00000384720 107 ntBASIC0.45□□□□□ -2.34
PCDHGB3Q9Y5G1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.45□□□□□ -2.34
PCDHGB3Q9Y5G1 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
PCDHGB3Q9Y5G1 Y_RNA.686-201ENST00000516548 134 ntBASIC0.45□□□□□ -2.34
PCDHGB3Q9Y5G1 MIR8087-201ENST00000612745 78 ntBASIC0.45□□□□□ -2.34
PCDHGB3Q9Y5G1 SNORD118-201ENST00000363593 134 ntBASIC0.44□□□□□ -2.34
PCDHGB3Q9Y5G1 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
PCDHGB3Q9Y5G1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.44□□□□□ -2.34
PCDHGB3Q9Y5G1 Y_RNA.366-201ENST00000365540 102 ntBASIC0.44□□□□□ -2.34
PCDHGB3Q9Y5G1 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
PCDHGB3Q9Y5G1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.44□□□□□ -2.34
PCDHGB3Q9Y5G1 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
PCDHGB3Q9Y5G1 RNU5E-3P-201ENST00000515913 68 ntBASIC0.44□□□□□ -2.34
PCDHGB3Q9Y5G1 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
PCDHGB3Q9Y5G1 SNORA31.14-201ENST00000516728 116 ntBASIC0.44□□□□□ -2.34
PCDHGB3Q9Y5G1 AC022523.2-201ENST00000561045 150 ntBASIC0.44□□□□□ -2.34
PCDHGB3Q9Y5G1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.44□□□□□ -2.34
PCDHGB3Q9Y5G1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.44□□□□□ -2.34
PCDHGB3Q9Y5G1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
PCDHGB3Q9Y5G1 RNU6-394P-201ENST00000410735 107 ntBASIC0.43□□□□□ -2.34
PCDHGB3Q9Y5G1 AC074198.2-201ENST00000508153 258 ntBASIC0.43□□□□□ -2.34
PCDHGB3Q9Y5G1 RNU6-531P-201ENST00000516694 104 ntBASIC0.43□□□□□ -2.34
PCDHGB3Q9Y5G1 MIR4639-201ENST00000584938 69 ntBASIC0.43□□□□□ -2.34
PCDHGB3Q9Y5G1 FTX_2.1-201ENST00000618816 94 ntBASIC0.43□□□□□ -2.34
PCDHGB3Q9Y5G1 RNY1P2-201ENST00000364820 117 ntBASIC0.42□□□□□ -2.34
PCDHGB3Q9Y5G1 MIR644A-201ENST00000385262 94 ntBASIC0.42□□□□□ -2.34
PCDHGB3Q9Y5G1 RNY4P20-201ENST00000516678 93 ntBASIC0.42□□□□□ -2.34
PCDHGB3Q9Y5G1 RNA5SP330-201ENST00000517096 96 ntBASIC0.42□□□□□ -2.34
PCDHGB3Q9Y5G1 MTND5P34-201ENST00000568888 325 ntBASIC0.42□□□□□ -2.34
PCDHGB3Q9Y5G1 RNU7-10P-201ENST00000607194 63 ntBASIC0.42□□□□□ -2.34
PCDHGB3Q9Y5G1 RNU6-915P-201ENST00000364943 103 ntBASIC0.41□□□□□ -2.34
PCDHGB3Q9Y5G1 RNU7-197P-201ENST00000458836 62 ntBASIC0.41□□□□□ -2.34
PCDHGB3Q9Y5G1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.41□□□□□ -2.34
PCDHGB3Q9Y5G1 AC138749.4-201ENST00000563970 127 ntBASIC0.41□□□□□ -2.34
PCDHGB3Q9Y5G1 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
PCDHGB3Q9Y5G1 AL109933.3-201ENST00000619095 188 ntBASIC0.41□□□□□ -2.34
PCDHGB3Q9Y5G1 RNA5SP62-201ENST00000363457 110 ntBASIC0.4□□□□□ -2.35
PCDHGB3Q9Y5G1 Y_RNA.178-201ENST00000363832 102 ntBASIC0.4□□□□□ -2.35
PCDHGB3Q9Y5G1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.4□□□□□ -2.35
PCDHGB3Q9Y5G1 AP001328.1-201ENST00000528550 176 ntBASIC0.4□□□□□ -2.35
PCDHGB3Q9Y5G1 MIR548X2-201ENST00000579776 100 ntBASIC0.4□□□□□ -2.35
PCDHGB3Q9Y5G1 SNORA25.18-201ENST00000607153 114 ntBASIC0.4□□□□□ -2.35
PCDHGB3Q9Y5G1 MIR6828-201ENST00000636181 60 ntBASIC0.4□□□□□ -2.35
PCDHGB3Q9Y5G1 Y_RNA.56-201ENST00000362798 112 ntBASIC0.39□□□□□ -2.35
PCDHGB3Q9Y5G1 Y_RNA.68-201ENST00000362881 102 ntBASIC0.39□□□□□ -2.35
PCDHGB3Q9Y5G1 Y_RNA.119-201ENST00000363301 96 ntBASIC0.39□□□□□ -2.35
PCDHGB3Q9Y5G1 RNY1P11-201ENST00000363759 113 ntBASIC0.39□□□□□ -2.35
PCDHGB3Q9Y5G1 RNU6-429P-201ENST00000384582 108 ntBASIC0.39□□□□□ -2.35
PCDHGB3Q9Y5G1 RNU6-848P-201ENST00000515948 107 ntBASIC0.39□□□□□ -2.35
PCDHGB3Q9Y5G1 RNU6-617P-201ENST00000516147 107 ntBASIC0.39□□□□□ -2.35
PCDHGB3Q9Y5G1 RNU6-473P-201ENST00000516164 107 ntBASIC0.39□□□□□ -2.35
PCDHGB3Q9Y5G1 RNU6-1049P-201ENST00000516414 107 ntBASIC0.39□□□□□ -2.35
PCDHGB3Q9Y5G1 SNORA62.5-201ENST00000516634 120 ntBASIC0.39□□□□□ -2.35
PCDHGB3Q9Y5G1 RNA5SP268-201ENST00000516828 124 ntBASIC0.39□□□□□ -2.35
PCDHGB3Q9Y5G1 MIR548H5-201ENST00000580314 60 ntBASIC0.39□□□□□ -2.35
PCDHGB3Q9Y5G1 AL359881.1-201ENST00000602916 267 ntBASIC0.39□□□□□ -2.35
PCDHGB3Q9Y5G1 AP001340.1-201ENST00000624405 217 ntBASIC0.39□□□□□ -2.35
PCDHGB3Q9Y5G1 AC091304.10-201ENST00000641554 121 ntBASIC0.39□□□□□ -2.35
PCDHGB3Q9Y5G1 MIR330-201ENST00000362196 94 ntBASIC0.38□□□□□ -2.35
PCDHGB3Q9Y5G1 RNA5SP257-201ENST00000363023 116 ntBASIC0.38□□□□□ -2.35
PCDHGB3Q9Y5G1 SNORD44.1-201ENST00000363202 61 ntBASIC0.38□□□□□ -2.35
PCDHGB3Q9Y5G1 RNU6-647P-201ENST00000364243 107 ntBASIC0.38□□□□□ -2.35
PCDHGB3Q9Y5G1 RNU6-1130P-201ENST00000365434 107 ntBASIC0.38□□□□□ -2.35
PCDHGB3Q9Y5G1 MIR1197-201ENST00000408818 88 ntBASIC0.38□□□□□ -2.35
PCDHGB3Q9Y5G1 RNA5SP134-201ENST00000516492 96 ntBASIC0.38□□□□□ -2.35
PCDHGB3Q9Y5G1 RNU6-794P-201ENST00000517261 64 ntBASIC0.38□□□□□ -2.35
PCDHGB3Q9Y5G1 MIR3144-201ENST00000579460 79 ntBASIC0.38□□□□□ -2.35
PCDHGB3Q9Y5G1 MIR3121-201ENST00000579680 77 ntBASIC0.38□□□□□ -2.35
PCDHGB3Q9Y5G1 Y_RNA.98-201ENST00000363109 102 ntBASIC0.37□□□□□ -2.35
PCDHGB3Q9Y5G1 Y_RNA.258-201ENST00000364613 105 ntBASIC0.37□□□□□ -2.35
PCDHGB3Q9Y5G1 Y_RNA.400-201ENST00000383963 111 ntBASIC0.37□□□□□ -2.35
PCDHGB3Q9Y5G1 RNU6-886P-201ENST00000384319 105 ntBASIC0.37□□□□□ -2.35
PCDHGB3Q9Y5G1 MIR759-201ENST00000390224 91 ntBASIC0.37□□□□□ -2.35
PCDHGB3Q9Y5G1 RNU6-460P-201ENST00000391158 108 ntBASIC0.37□□□□□ -2.35
PCDHGB3Q9Y5G1 RNU2-59P-201ENST00000410482 191 ntBASIC0.37□□□□□ -2.35
PCDHGB3Q9Y5G1 RNU7-48P-201ENST00000458875 63 ntBASIC0.37□□□□□ -2.35
PCDHGB3Q9Y5G1 RNA5SP227-201ENST00000516184 113 ntBASIC0.37□□□□□ -2.35
PCDHGB3Q9Y5G1 AC105081.1-201ENST00000617727 106 ntBASIC0.37□□□□□ -2.35
PCDHGB3Q9Y5G1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
PCDHGB3Q9Y5G1 RNU6-508P-201ENST00000363231 103 ntBASIC0.36□□□□□ -2.35
PCDHGB3Q9Y5G1 SNORA36.1-201ENST00000363424 132 ntBASIC0.36□□□□□ -2.35
PCDHGB3Q9Y5G1 SNORD28-201ENST00000384706 75 ntBASIC0.36□□□□□ -2.35
PCDHGB3Q9Y5G1 MIR206-201ENST00000384872 86 ntBASIC0.36□□□□□ -2.35
PCDHGB3Q9Y5G1 RNA5SP47-201ENST00000517230 109 ntBASIC0.36□□□□□ -2.35
PCDHGB3Q9Y5G1 AC138869.1-201ENST00000568623 124 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms