Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 RNU6-613P-201ENST00000410412 108 ntBASIC2.23□□□□□ -2.05
RTCBQ9Y3I0 RNU6-717P-201ENST00000459076 104 ntBASIC2.23□□□□□ -2.05
RTCBQ9Y3I0 RNA5SP233-201ENST00000459153 113 ntBASIC2.23□□□□□ -2.05
RTCBQ9Y3I0 MIR2115-201ENST00000516657 100 ntBASIC2.23□□□□□ -2.05
RTCBQ9Y3I0 SNORA4-201ENST00000584302 138 ntBASIC2.23□□□□□ -2.05
RTCBQ9Y3I0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.23□□□□□ -2.05
RTCBQ9Y3I0 MIR6740-201ENST00000618268 113 ntBASIC2.23□□□□□ -2.05
RTCBQ9Y3I0 AC025521.1-201ENST00000621624 286 ntBASIC2.23□□□□□ -2.05
RTCBQ9Y3I0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.23□□□□□ -2.05
RTCBQ9Y3I0 AC006160.2-201ENST00000637708 154 ntBASIC2.23□□□□□ -2.05
RTCBQ9Y3I0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RTCBQ9Y3I0 Y_RNA.168-201ENST00000363740 102 ntBASIC2.22□□□□□ -2.05
RTCBQ9Y3I0 MT-TN-201ENST00000387400 73 ntBASIC2.22□□□□□ -2.05
RTCBQ9Y3I0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.22□□□□□ -2.05
RTCBQ9Y3I0 RN7SL274P-201ENST00000492268 272 ntBASIC2.22□□□□□ -2.05
RTCBQ9Y3I0 AL133373.1-201ENST00000497098 94 ntBASIC2.22□□□□□ -2.05
RTCBQ9Y3I0 AC090897.1-201ENST00000580909 226 ntBASIC2.22□□□□□ -2.05
RTCBQ9Y3I0 AC020891.4-201ENST00000605745 93 ntBASIC2.22□□□□□ -2.05
RTCBQ9Y3I0 BX248123.2-201ENST00000606318 124 ntBASIC2.22□□□□□ -2.05
RTCBQ9Y3I0 Y_RNA.313-201ENST00000365095 103 ntBASIC2.21□□□□□ -2.06
RTCBQ9Y3I0 snoU13.25-201ENST00000458945 104 ntBASIC2.21□□□□□ -2.06
RTCBQ9Y3I0 AC138749.4-201ENST00000563970 127 ntBASIC2.21□□□□□ -2.06
RTCBQ9Y3I0 MIR4500-201ENST00000579472 76 ntBASIC2.21□□□□□ -2.06
RTCBQ9Y3I0 MIR30D-201ENST00000362283 70 ntBASIC2.2□□□□□ -2.06
RTCBQ9Y3I0 SNORA16.1-201ENST00000364597 132 ntBASIC2.2□□□□□ -2.06
RTCBQ9Y3I0 RNU4-52P-201ENST00000384209 138 ntBASIC2.2□□□□□ -2.06
RTCBQ9Y3I0 RNU6-1165P-201ENST00000410119 107 ntBASIC2.2□□□□□ -2.06
RTCBQ9Y3I0 RNU11-2P-201ENST00000516898 142 ntBASIC2.2□□□□□ -2.06
RTCBQ9Y3I0 MIR8066-201ENST00000617280 78 ntBASIC2.2□□□□□ -2.06
RTCBQ9Y3I0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RTCBQ9Y3I0 AL359851.1-201ENST00000569460 4997 ntBASIC2.19□□□□□ -2.06
RTCBQ9Y3I0 RNU6-205P-201ENST00000390858 107 ntBASIC2.19□□□□□ -2.06
RTCBQ9Y3I0 RNU6-279P-201ENST00000391297 101 ntBASIC2.19□□□□□ -2.06
RTCBQ9Y3I0 AL356379.1-201ENST00000414105 126 ntBASIC2.19□□□□□ -2.06
RTCBQ9Y3I0 RNU7-62P-201ENST00000458856 62 ntBASIC2.19□□□□□ -2.06
RTCBQ9Y3I0 AP003716.2-201ENST00000528260 108 ntBASIC2.19□□□□□ -2.06
RTCBQ9Y3I0 MIR4299-201ENST00000577899 72 ntBASIC2.19□□□□□ -2.06
RTCBQ9Y3I0 U6.109-201ENST00000636749 87 ntBASIC2.19□□□□□ -2.06
RTCBQ9Y3I0 MIR518E-201ENST00000385252 88 ntBASIC2.18□□□□□ -2.06
RTCBQ9Y3I0 Y_RNA.607-201ENST00000410597 98 ntBASIC2.18□□□□□ -2.06
RTCBQ9Y3I0 AC245517.4-201ENST00000448601 281 ntBASIC2.18□□□□□ -2.06
RTCBQ9Y3I0 SNRPGP12-201ENST00000449481 213 ntBASIC2.18□□□□□ -2.06
RTCBQ9Y3I0 AL627230.6-201ENST00000611129 280 ntBASIC2.18□□□□□ -2.06
RTCBQ9Y3I0 MIR8063-201ENST00000621930 81 ntBASIC2.18□□□□□ -2.06
RTCBQ9Y3I0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.18□□□□□ -2.06
RTCBQ9Y3I0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.17□□□□□ -2.06
RTCBQ9Y3I0 RNA5SP133-201ENST00000363368 119 ntBASIC2.17□□□□□ -2.06
RTCBQ9Y3I0 MT-TF-201ENST00000387314 71 ntBASIC2.17□□□□□ -2.06
RTCBQ9Y3I0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RTCBQ9Y3I0 snoU13.9-201ENST00000458927 103 ntBASIC2.17□□□□□ -2.06
RTCBQ9Y3I0 RPL30P7-201ENST00000479312 323 ntBASIC2.17□□□□□ -2.06
RTCBQ9Y3I0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.17□□□□□ -2.06
RTCBQ9Y3I0 MIR6516-201ENST00000630554 81 ntBASIC2.17□□□□□ -2.06
RTCBQ9Y3I0 Y_RNA.119-201ENST00000363301 96 ntBASIC2.16□□□□□ -2.06
RTCBQ9Y3I0 MIR519C-201ENST00000385053 87 ntBASIC2.16□□□□□ -2.06
RTCBQ9Y3I0 MIR1185-1-201ENST00000408598 86 ntBASIC2.16□□□□□ -2.06
RTCBQ9Y3I0 RNU6-519P-201ENST00000410590 108 ntBASIC2.16□□□□□ -2.06
RTCBQ9Y3I0 AC008163.1-202ENST00000636004 2889 ntBASIC2.15□□□□□ -2.07
RTCBQ9Y3I0 MIR377-201ENST00000362145 69 ntBASIC2.15□□□□□ -2.07
RTCBQ9Y3I0 MIR103A2-201ENST00000362154 78 ntBASIC2.15□□□□□ -2.07
RTCBQ9Y3I0 Y_RNA.57-201ENST00000362806 113 ntBASIC2.15□□□□□ -2.07
RTCBQ9Y3I0 RNA5SP264-201ENST00000363115 107 ntBASIC2.15□□□□□ -2.07
RTCBQ9Y3I0 SNORD115-27-201ENST00000364430 82 ntBASIC2.15□□□□□ -2.07
RTCBQ9Y3I0 Y_RNA.244-201ENST00000364484 109 ntBASIC2.15□□□□□ -2.07
RTCBQ9Y3I0 RNU6-571P-201ENST00000384128 107 ntBASIC2.15□□□□□ -2.07
RTCBQ9Y3I0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RTCBQ9Y3I0 RNU6-850P-201ENST00000516934 103 ntBASIC2.15□□□□□ -2.07
RTCBQ9Y3I0 MIR4448-201ENST00000584360 86 ntBASIC2.15□□□□□ -2.07
RTCBQ9Y3I0 AC103810.8-201ENST00000607347 118 ntBASIC2.15□□□□□ -2.07
RTCBQ9Y3I0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RTCBQ9Y3I0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RTCBQ9Y3I0 MIR302D-201ENST00000362275 68 ntBASIC2.14□□□□□ -2.07
RTCBQ9Y3I0 Y_RNA.327-201ENST00000365201 102 ntBASIC2.14□□□□□ -2.07
RTCBQ9Y3I0 RNU6-652P-201ENST00000365488 107 ntBASIC2.14□□□□□ -2.07
RTCBQ9Y3I0 RNU4-83P-201ENST00000410863 133 ntBASIC2.14□□□□□ -2.07
RTCBQ9Y3I0 RNU6-857P-201ENST00000515893 110 ntBASIC2.14□□□□□ -2.07
RTCBQ9Y3I0 RNU6-524P-201ENST00000384270 107 ntBASIC2.13□□□□□ -2.07
RTCBQ9Y3I0 MIR489-201ENST00000384923 84 ntBASIC2.13□□□□□ -2.07
RTCBQ9Y3I0 AC093729.1-201ENST00000513074 128 ntBASIC2.13□□□□□ -2.07
RTCBQ9Y3I0 SNORA44.1-201ENST00000517031 108 ntBASIC2.13□□□□□ -2.07
RTCBQ9Y3I0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.13□□□□□ -2.07
RTCBQ9Y3I0 MIR4419B-201ENST00000577260 68 ntBASIC2.13□□□□□ -2.07
RTCBQ9Y3I0 SNORD53B-201ENST00000577887 78 ntBASIC2.13□□□□□ -2.07
RTCBQ9Y3I0 AL645939.4-201ENST00000604495 135 ntBASIC2.13□□□□□ -2.07
RTCBQ9Y3I0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
RTCBQ9Y3I0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
RTCBQ9Y3I0 SNORD33-201ENST00000362761 85 ntBASIC2.12□□□□□ -2.07
RTCBQ9Y3I0 SNORD1A-201ENST00000364968 72 ntBASIC2.12□□□□□ -2.07
RTCBQ9Y3I0 RNU6-24P-201ENST00000384440 107 ntBASIC2.12□□□□□ -2.07
RTCBQ9Y3I0 MIR30A-201ENST00000385092 71 ntBASIC2.12□□□□□ -2.07
RTCBQ9Y3I0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.12□□□□□ -2.07
RTCBQ9Y3I0 AC005908.1-201ENST00000468701 347 ntBASIC2.12□□□□□ -2.07
RTCBQ9Y3I0 AC079140.2-201ENST00000506193 142 ntBASIC2.12□□□□□ -2.07
RTCBQ9Y3I0 AL096840.1-201ENST00000603287 93 ntBASIC2.12□□□□□ -2.07
RTCBQ9Y3I0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.12□□□□□ -2.07
RTCBQ9Y3I0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
RTCBQ9Y3I0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RTCBQ9Y3I0 SNORD115-37-201ENST00000363768 82 ntBASIC2.11□□□□□ -2.07
RTCBQ9Y3I0 RNU1-42P-201ENST00000364033 160 ntBASIC2.11□□□□□ -2.07
RTCBQ9Y3I0 RNU6-392P-201ENST00000364926 101 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms