Protein–RNA interactions for Protein: Q9UPN9

TRIM33, E3 ubiquitin-protein ligase TRIM33, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM33Q9UPN9 MIR516A2-201ENST00000384888 90 ntBASIC2.05□□□□□ -2.08
TRIM33Q9UPN9 MIR516A1-201ENST00000385033 90 ntBASIC2.05□□□□□ -2.08
TRIM33Q9UPN9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
TRIM33Q9UPN9 RPL23AP42-201ENST00000471152 471 ntBASIC2.05□□□□□ -2.08
TRIM33Q9UPN9 MIR4796-201ENST00000580742 81 ntBASIC2.05□□□□□ -2.08
TRIM33Q9UPN9 MIR4491-201ENST00000581087 68 ntBASIC2.05□□□□□ -2.08
TRIM33Q9UPN9 MIR4536-1-201ENST00000583537 88 ntBASIC2.05□□□□□ -2.08
TRIM33Q9UPN9 U7.4-201ENST00000614961 63 ntBASIC2.05□□□□□ -2.08
TRIM33Q9UPN9 RNU6-243P-201ENST00000391140 107 ntBASIC2.04□□□□□ -2.08
TRIM33Q9UPN9 Y_RNA.588-201ENST00000391254 102 ntBASIC2.04□□□□□ -2.08
TRIM33Q9UPN9 AL450471.1-201ENST00000447509 127 ntBASIC2.04□□□□□ -2.08
TRIM33Q9UPN9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
TRIM33Q9UPN9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
TRIM33Q9UPN9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRIM33Q9UPN9 MIR302D-201ENST00000362275 68 ntBASIC2.03□□□□□ -2.08
TRIM33Q9UPN9 RNA5SP289-201ENST00000362332 137 ntBASIC2.03□□□□□ -2.08
TRIM33Q9UPN9 RNU6-654P-201ENST00000364373 107 ntBASIC2.03□□□□□ -2.08
TRIM33Q9UPN9 SUMO2P12-201ENST00000405924 140 ntBASIC2.03□□□□□ -2.08
TRIM33Q9UPN9 AC023790.1-201ENST00000482174 347 ntBASIC2.03□□□□□ -2.08
TRIM33Q9UPN9 RNU6-1194P-201ENST00000516208 104 ntBASIC2.03□□□□□ -2.08
TRIM33Q9UPN9 RNU6-531P-201ENST00000516694 104 ntBASIC2.03□□□□□ -2.08
TRIM33Q9UPN9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.03□□□□□ -2.08
TRIM33Q9UPN9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
TRIM33Q9UPN9 SNORA63.2-201ENST00000362603 126 ntBASIC2.02□□□□□ -2.09
TRIM33Q9UPN9 Y_RNA.283-201ENST00000364798 112 ntBASIC2.02□□□□□ -2.09
TRIM33Q9UPN9 RNA5SP126-201ENST00000365092 109 ntBASIC2.02□□□□□ -2.09
TRIM33Q9UPN9 RNU6-75P-201ENST00000515944 104 ntBASIC2.02□□□□□ -2.09
TRIM33Q9UPN9 Y_RNA.660-201ENST00000516002 120 ntBASIC2.02□□□□□ -2.09
TRIM33Q9UPN9 SNORA25.16-201ENST00000516741 121 ntBASIC2.02□□□□□ -2.09
TRIM33Q9UPN9 MIR8063-201ENST00000621930 81 ntBASIC2.02□□□□□ -2.09
TRIM33Q9UPN9 MIRLET7A1-201ENST00000362295 80 ntBASIC2.01□□□□□ -2.09
TRIM33Q9UPN9 RNU1-36P-201ENST00000365130 165 ntBASIC2.01□□□□□ -2.09
TRIM33Q9UPN9 RNU6-466P-201ENST00000391224 103 ntBASIC2.01□□□□□ -2.09
TRIM33Q9UPN9 SNORD93-201ENST00000408813 74 ntBASIC2.01□□□□□ -2.09
TRIM33Q9UPN9 RNU6-380P-201ENST00000410207 107 ntBASIC2.01□□□□□ -2.09
TRIM33Q9UPN9 FGF7P7-201ENST00000514120 227 ntBASIC2.01□□□□□ -2.09
TRIM33Q9UPN9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.01□□□□□ -2.09
TRIM33Q9UPN9 SNORD92-201ENST00000585078 85 ntBASIC2.01□□□□□ -2.09
TRIM33Q9UPN9 AC103810.8-201ENST00000607347 118 ntBASIC2.01□□□□□ -2.09
TRIM33Q9UPN9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
TRIM33Q9UPN9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TRIM33Q9UPN9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
TRIM33Q9UPN9 SNORD33-201ENST00000362761 85 ntBASIC2□□□□□ -2.09
TRIM33Q9UPN9 RNU6-686P-201ENST00000364839 107 ntBASIC2□□□□□ -2.09
TRIM33Q9UPN9 Y_RNA.545-201ENST00000384652 105 ntBASIC2□□□□□ -2.09
TRIM33Q9UPN9 Y_RNA.565-201ENST00000384719 101 ntBASIC2□□□□□ -2.09
TRIM33Q9UPN9 RNA5SP292-201ENST00000390974 118 ntBASIC2□□□□□ -2.09
TRIM33Q9UPN9 RNA5SP489-201ENST00000410986 109 ntBASIC2□□□□□ -2.09
TRIM33Q9UPN9 snoU13.9-201ENST00000458927 103 ntBASIC2□□□□□ -2.09
TRIM33Q9UPN9 RNU7-106P-201ENST00000459514 67 ntBASIC2□□□□□ -2.09
TRIM33Q9UPN9 MIR3064-201ENST00000581130 66 ntBASIC2□□□□□ -2.09
TRIM33Q9UPN9 AC104996.3-201ENST00000590718 94 ntBASIC2□□□□□ -2.09
TRIM33Q9UPN9 FAS-AS1.1-201ENST00000615327 126 ntBASIC2□□□□□ -2.09
TRIM33Q9UPN9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRIM33Q9UPN9 SNORA67.3-201ENST00000384366 140 ntBASIC1.99□□□□□ -2.09
TRIM33Q9UPN9 MIR548U-201ENST00000390728 81 ntBASIC1.99□□□□□ -2.09
TRIM33Q9UPN9 RNA5SP95-201ENST00000410319 137 ntBASIC1.99□□□□□ -2.09
TRIM33Q9UPN9 SNORD63B-201ENST00000411005 70 ntBASIC1.99□□□□□ -2.09
TRIM33Q9UPN9 MIR519A1-201ENST00000385257 85 ntBASIC1.98□□□□□ -2.09
TRIM33Q9UPN9 RNU4-53P-201ENST00000410828 140 ntBASIC1.98□□□□□ -2.09
TRIM33Q9UPN9 SNORA18.5-201ENST00000516616 101 ntBASIC1.98□□□□□ -2.09
TRIM33Q9UPN9 SNORD1A-201ENST00000364968 72 ntBASIC1.97□□□□□ -2.09
TRIM33Q9UPN9 SNORA25.9-201ENST00000365087 128 ntBASIC1.97□□□□□ -2.09
TRIM33Q9UPN9 RNU6-132P-201ENST00000383863 107 ntBASIC1.97□□□□□ -2.09
TRIM33Q9UPN9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.97□□□□□ -2.09
TRIM33Q9UPN9 MIR30A-201ENST00000385092 71 ntBASIC1.97□□□□□ -2.09
TRIM33Q9UPN9 SNORD100-201ENST00000408573 76 ntBASIC1.97□□□□□ -2.09
TRIM33Q9UPN9 AC079140.2-201ENST00000506193 142 ntBASIC1.97□□□□□ -2.09
TRIM33Q9UPN9 SNORA44.1-201ENST00000517031 108 ntBASIC1.97□□□□□ -2.09
TRIM33Q9UPN9 RNU7-10P-201ENST00000607194 63 ntBASIC1.97□□□□□ -2.09
TRIM33Q9UPN9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.97□□□□□ -2.09
TRIM33Q9UPN9 RNU6-403P-201ENST00000363163 104 ntBASIC1.96□□□□□ -2.1
TRIM33Q9UPN9 HMGN2P23-201ENST00000456759 269 ntBASIC1.96□□□□□ -2.1
TRIM33Q9UPN9 MIR3664-201ENST00000579074 99 ntBASIC1.96□□□□□ -2.1
TRIM33Q9UPN9 MIR548H5-201ENST00000580314 60 ntBASIC1.96□□□□□ -2.1
TRIM33Q9UPN9 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.96□□□□□ -2.1
TRIM33Q9UPN9 MIR6873-201ENST00000622788 63 ntBASIC1.96□□□□□ -2.1
TRIM33Q9UPN9 MIR101-2-201ENST00000362195 79 ntBASIC1.95□□□□□ -2.1
TRIM33Q9UPN9 U8.2-201ENST00000363156 134 ntBASIC1.95□□□□□ -2.1
TRIM33Q9UPN9 Y_RNA.491-201ENST00000384417 107 ntBASIC1.95□□□□□ -2.1
TRIM33Q9UPN9 MIR635-201ENST00000384830 98 ntBASIC1.95□□□□□ -2.1
TRIM33Q9UPN9 U8.13-201ENST00000390842 128 ntBASIC1.95□□□□□ -2.1
TRIM33Q9UPN9 RNU6-788P-201ENST00000390967 104 ntBASIC1.95□□□□□ -2.1
TRIM33Q9UPN9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.95□□□□□ -2.1
TRIM33Q9UPN9 RNU7-185P-201ENST00000459215 60 ntBASIC1.95□□□□□ -2.1
TRIM33Q9UPN9 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
TRIM33Q9UPN9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.95□□□□□ -2.1
TRIM33Q9UPN9 AC012493.3-201ENST00000604494 112 ntBASIC1.95□□□□□ -2.1
TRIM33Q9UPN9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRIM33Q9UPN9 RNU6-161P-201ENST00000363051 106 ntBASIC1.94□□□□□ -2.1
TRIM33Q9UPN9 RNU6-957P-201ENST00000363652 99 ntBASIC1.94□□□□□ -2.1
TRIM33Q9UPN9 Y_RNA.536-201ENST00000384621 113 ntBASIC1.94□□□□□ -2.1
TRIM33Q9UPN9 MIR1257-201ENST00000408490 117 ntBASIC1.94□□□□□ -2.1
TRIM33Q9UPN9 RNU6-165P-201ENST00000517170 99 ntBASIC1.94□□□□□ -2.1
TRIM33Q9UPN9 AC019176.1-201ENST00000518519 225 ntBASIC1.94□□□□□ -2.1
TRIM33Q9UPN9 AC023934.1-201ENST00000574529 2389 ntBASIC1.93□□□□□ -2.1
TRIM33Q9UPN9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TRIM33Q9UPN9 Y_RNA.264-201ENST00000364665 102 ntBASIC1.93□□□□□ -2.1
TRIM33Q9UPN9 MIR518E-201ENST00000385252 88 ntBASIC1.93□□□□□ -2.1
TRIM33Q9UPN9 Z98742.3-201ENST00000418637 326 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms