Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 SNORA25.18-201ENST00000607153 114 ntBASIC0.43□□□□□ -2.34
SHROOM4Q9ULL8 Y_RNA.470-201ENST00000384307 117 ntBASIC0.42□□□□□ -2.34
SHROOM4Q9ULL8 RNU2-59P-201ENST00000410482 191 ntBASIC0.42□□□□□ -2.34
SHROOM4Q9ULL8 SNORA25.16-201ENST00000516741 121 ntBASIC0.42□□□□□ -2.34
SHROOM4Q9ULL8 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.42□□□□□ -2.34
SHROOM4Q9ULL8 RNU6-239P-201ENST00000390990 99 ntBASIC0.41□□□□□ -2.34
SHROOM4Q9ULL8 RNU6-588P-201ENST00000410281 105 ntBASIC0.41□□□□□ -2.34
SHROOM4Q9ULL8 Y_RNA.120-201ENST00000363304 110 ntBASIC0.41□□□□□ -2.34
SHROOM4Q9ULL8 RNU6-1229P-201ENST00000364295 107 ntBASIC0.41□□□□□ -2.34
SHROOM4Q9ULL8 RNA5SP268-201ENST00000516828 124 ntBASIC0.41□□□□□ -2.34
SHROOM4Q9ULL8 MTND5P34-201ENST00000568888 325 ntBASIC0.41□□□□□ -2.34
SHROOM4Q9ULL8 AC072026.1-201ENST00000605023 201 ntBASIC0.41□□□□□ -2.34
SHROOM4Q9ULL8 AC141273.2-201ENST00000618989 130 ntBASIC0.41□□□□□ -2.34
SHROOM4Q9ULL8 Y_RNA.644-201ENST00000459006 113 ntBASIC0.4□□□□□ -2.35
SHROOM4Q9ULL8 Y_RNA.674-201ENST00000516362 113 ntBASIC0.4□□□□□ -2.35
SHROOM4Q9ULL8 AC138907.4-201ENST00000570107 226 ntBASIC0.4□□□□□ -2.35
SHROOM4Q9ULL8 SNORA36.1-201ENST00000363424 132 ntBASIC0.39□□□□□ -2.35
SHROOM4Q9ULL8 RNU6-1318P-201ENST00000365389 103 ntBASIC0.39□□□□□ -2.35
SHROOM4Q9ULL8 AC108740.1-201ENST00000498629 225 ntBASIC0.39□□□□□ -2.35
SHROOM4Q9ULL8 RNU6-1219P-201ENST00000516143 112 ntBASIC0.39□□□□□ -2.35
SHROOM4Q9ULL8 AL353621.2-201ENST00000605340 133 ntBASIC0.39□□□□□ -2.35
SHROOM4Q9ULL8 MIR101-2-201ENST00000362195 79 ntBASIC0.38□□□□□ -2.35
SHROOM4Q9ULL8 Y_RNA.299-201ENST00000364973 94 ntBASIC0.38□□□□□ -2.35
SHROOM4Q9ULL8 Y_RNA.144-201ENST00000363521 113 ntBASIC0.37□□□□□ -2.35
SHROOM4Q9ULL8 AC130289.1-201ENST00000577321 73 ntBASIC0.37□□□□□ -2.35
SHROOM4Q9ULL8 RNA5SP133-201ENST00000363368 119 ntBASIC0.36□□□□□ -2.35
SHROOM4Q9ULL8 SNORD114-10-201ENST00000363409 72 ntBASIC0.36□□□□□ -2.35
SHROOM4Q9ULL8 Y_RNA.497-201ENST00000384447 98 ntBASIC0.36□□□□□ -2.35
SHROOM4Q9ULL8 MIRLET7F2-201ENST00000385277 83 ntBASIC0.36□□□□□ -2.35
SHROOM4Q9ULL8 SNORD37.2-201ENST00000391075 66 ntBASIC0.36□□□□□ -2.35
SHROOM4Q9ULL8 RNA5SP266-201ENST00000410273 108 ntBASIC0.36□□□□□ -2.35
SHROOM4Q9ULL8 RNU6-531P-201ENST00000516694 104 ntBASIC0.36□□□□□ -2.35
SHROOM4Q9ULL8 SNORA9.1-201ENST00000362412 131 ntBASIC0.35□□□□□ -2.35
SHROOM4Q9ULL8 RNU6-291P-201ENST00000384720 107 ntBASIC0.35□□□□□ -2.35
SHROOM4Q9ULL8 MIR4639-201ENST00000584938 69 ntBASIC0.35□□□□□ -2.35
SHROOM4Q9ULL8 AC021443.1-201ENST00000604478 211 ntBASIC0.35□□□□□ -2.35
SHROOM4Q9ULL8 AC078938.1-201ENST00000620993 318 ntBASIC0.35□□□□□ -2.35
SHROOM4Q9ULL8 AC091304.10-201ENST00000641554 121 ntBASIC0.35□□□□□ -2.35
SHROOM4Q9ULL8 Y_RNA.188-201ENST00000363952 111 ntBASIC0.35□□□□□ -2.35
SHROOM4Q9ULL8 SNORA32-201ENST00000384072 121 ntBASIC0.35□□□□□ -2.35
SHROOM4Q9ULL8 Y_RNA.793-201ENST00000411222 111 ntBASIC0.35□□□□□ -2.35
SHROOM4Q9ULL8 DNAJC19P2-201ENST00000593340 302 ntBASIC0.35□□□□□ -2.35
SHROOM4Q9ULL8 Y_RNA.401-201ENST00000383965 117 ntBASIC0.34□□□□□ -2.36
SHROOM4Q9ULL8 SNORD28-201ENST00000384706 75 ntBASIC0.34□□□□□ -2.36
SHROOM4Q9ULL8 RNU6-240P-201ENST00000516098 97 ntBASIC0.34□□□□□ -2.36
SHROOM4Q9ULL8 RNA5SP67-201ENST00000516422 131 ntBASIC0.34□□□□□ -2.36
SHROOM4Q9ULL8 AC022559.1-201ENST00000520905 205 ntBASIC0.34□□□□□ -2.36
SHROOM4Q9ULL8 AC099654.10-201ENST00000640395 161 ntBASIC0.34□□□□□ -2.36
SHROOM4Q9ULL8 Y_RNA.32-201ENST00000362589 110 ntBASIC0.33□□□□□ -2.36
SHROOM4Q9ULL8 Y_RNA.297-201ENST00000364950 91 ntBASIC0.33□□□□□ -2.36
SHROOM4Q9ULL8 Y_RNA.488-201ENST00000384403 102 ntBASIC0.33□□□□□ -2.36
SHROOM4Q9ULL8 Y_RNA.584-201ENST00000391090 114 ntBASIC0.33□□□□□ -2.36
SHROOM4Q9ULL8 RNU7-164P-201ENST00000459221 62 ntBASIC0.33□□□□□ -2.36
SHROOM4Q9ULL8 RNU7-121P-201ENST00000516604 62 ntBASIC0.33□□□□□ -2.36
SHROOM4Q9ULL8 MIR4768-201ENST00000585270 74 ntBASIC0.33□□□□□ -2.36
SHROOM4Q9ULL8 MIR4315-1-201ENST00000636800 73 ntBASIC0.33□□□□□ -2.36
SHROOM4Q9ULL8 MIR4315-2-201ENST00000640925 73 ntBASIC0.33□□□□□ -2.36
SHROOM4Q9ULL8 RNU4-84P-201ENST00000364200 139 ntBASIC0.32□□□□□ -2.36
SHROOM4Q9ULL8 RNA5SP227-201ENST00000516184 113 ntBASIC0.32□□□□□ -2.36
SHROOM4Q9ULL8 RNU6-1271P-201ENST00000517049 105 ntBASIC0.32□□□□□ -2.36
SHROOM4Q9ULL8 SCARNA16.5-201ENST00000517114 183 ntBASIC0.32□□□□□ -2.36
SHROOM4Q9ULL8 RNA5SP47-201ENST00000517230 109 ntBASIC0.32□□□□□ -2.36
SHROOM4Q9ULL8 AP002392.1-201ENST00000537692 208 ntBASIC0.32□□□□□ -2.36
SHROOM4Q9ULL8 AC112693.2-201ENST00000556538 232 ntBASIC0.32□□□□□ -2.36
SHROOM4Q9ULL8 MIR4493-201ENST00000584016 73 ntBASIC0.32□□□□□ -2.36
SHROOM4Q9ULL8 AC108676.2-201ENST00000605225 163 ntBASIC0.32□□□□□ -2.36
SHROOM4Q9ULL8 MIR6828-201ENST00000636181 60 ntBASIC0.32□□□□□ -2.36
SHROOM4Q9ULL8 SNORD114-31-201ENST00000363219 75 ntBASIC0.31□□□□□ -2.36
SHROOM4Q9ULL8 AC073261.1-201ENST00000429409 121 ntBASIC0.31□□□□□ -2.36
SHROOM4Q9ULL8 RNU2-35P-201ENST00000516446 142 ntBASIC0.31□□□□□ -2.36
SHROOM4Q9ULL8 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.31□□□□□ -2.36
SHROOM4Q9ULL8 MTRNR2L2-201ENST00000604882 87 ntBASIC0.31□□□□□ -2.36
SHROOM4Q9ULL8 SNORD95.1-201ENST00000364099 68 ntBASIC0.3□□□□□ -2.36
SHROOM4Q9ULL8 Y_RNA.552-201ENST00000384665 112 ntBASIC0.3□□□□□ -2.36
SHROOM4Q9ULL8 SNORD67.1-201ENST00000516618 108 ntBASIC0.3□□□□□ -2.36
SHROOM4Q9ULL8 Y_RNA.700-201ENST00000516806 100 ntBASIC0.3□□□□□ -2.36
SHROOM4Q9ULL8 MIR5093-201ENST00000583199 100 ntBASIC0.3□□□□□ -2.36
SHROOM4Q9ULL8 AP001180.6-201ENST00000584918 159 ntBASIC0.3□□□□□ -2.36
SHROOM4Q9ULL8 U6.109-201ENST00000636749 87 ntBASIC0.3□□□□□ -2.36
SHROOM4Q9ULL8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.3□□□□□ -2.36
SHROOM4Q9ULL8 Y_RNA.56-201ENST00000362798 112 ntBASIC0.29□□□□□ -2.36
SHROOM4Q9ULL8 Y_RNA.119-201ENST00000363301 96 ntBASIC0.29□□□□□ -2.36
SHROOM4Q9ULL8 MIR604-201ENST00000384880 94 ntBASIC0.29□□□□□ -2.36
SHROOM4Q9ULL8 MIR548AE2-201ENST00000583456 67 ntBASIC0.29□□□□□ -2.36
SHROOM4Q9ULL8 AC244669.1-204ENST00000621564 178 ntBASIC0.29□□□□□ -2.36
SHROOM4Q9ULL8 RNU4-69P-201ENST00000410677 143 ntBASIC0.29□□□□□ -2.36
SHROOM4Q9ULL8 SUMO1P3-201ENST00000439961 304 ntBASIC0.29□□□□□ -2.36
SHROOM4Q9ULL8 RNU6-848P-201ENST00000515948 107 ntBASIC0.29□□□□□ -2.36
SHROOM4Q9ULL8 RNU6-617P-201ENST00000516147 107 ntBASIC0.29□□□□□ -2.36
SHROOM4Q9ULL8 RNU6-473P-201ENST00000516164 107 ntBASIC0.29□□□□□ -2.36
SHROOM4Q9ULL8 RNU6-1049P-201ENST00000516414 107 ntBASIC0.29□□□□□ -2.36
SHROOM4Q9ULL8 AC069113.3-201ENST00000521019 150 ntBASIC0.29□□□□□ -2.36
SHROOM4Q9ULL8 AC069271.1-201ENST00000445577 156 ntBASIC0.28□□□□□ -2.37
SHROOM4Q9ULL8 RNU7-137P-201ENST00000516788 62 ntBASIC0.28□□□□□ -2.37
SHROOM4Q9ULL8 AC138749.4-201ENST00000563970 127 ntBASIC0.28□□□□□ -2.37
SHROOM4Q9ULL8 RNU6-429P-201ENST00000384582 108 ntBASIC0.27□□□□□ -2.37
SHROOM4Q9ULL8 Y_RNA.662-201ENST00000516028 97 ntBASIC0.27□□□□□ -2.37
SHROOM4Q9ULL8 AC098479.1-201ENST00000609225 154 ntBASIC0.27□□□□□ -2.37
SHROOM4Q9ULL8 AL603914.1-201ENST00000401964 204 ntBASIC0.26□□□□□ -2.37
SHROOM4Q9ULL8 MIR4723-201ENST00000585070 81 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms