Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MTND5P34-201ENST00000568888 325 ntBASIC0.85□□□□□ -2.27
SIX4Q9UIU6 MIR4491-201ENST00000581087 68 ntBASIC0.85□□□□□ -2.27
SIX4Q9UIU6 RNU6-403P-201ENST00000363163 104 ntBASIC0.84□□□□□ -2.27
SIX4Q9UIU6 Y_RNA.549-201ENST00000384657 102 ntBASIC0.84□□□□□ -2.27
SIX4Q9UIU6 MIR938-201ENST00000401216 83 ntBASIC0.84□□□□□ -2.27
SIX4Q9UIU6 RNU7-156P-201ENST00000517214 74 ntBASIC0.84□□□□□ -2.27
SIX4Q9UIU6 AC007012.1-201ENST00000567192 175 ntBASIC0.84□□□□□ -2.27
SIX4Q9UIU6 AC008608.1-201ENST00000603910 127 ntBASIC0.84□□□□□ -2.27
SIX4Q9UIU6 MIR8066-201ENST00000617280 78 ntBASIC0.84□□□□□ -2.27
SIX4Q9UIU6 U6.109-201ENST00000636749 87 ntBASIC0.84□□□□□ -2.27
SIX4Q9UIU6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SIX4Q9UIU6 RNA5SP133-201ENST00000363368 119 ntBASIC0.83□□□□□ -2.28
SIX4Q9UIU6 SNORA72.6-201ENST00000384520 129 ntBASIC0.83□□□□□ -2.28
SIX4Q9UIU6 MIR520H-201ENST00000385126 88 ntBASIC0.83□□□□□ -2.28
SIX4Q9UIU6 SNORD105-201ENST00000386910 85 ntBASIC0.83□□□□□ -2.28
SIX4Q9UIU6 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
SIX4Q9UIU6 RNU7-56P-201ENST00000458744 62 ntBASIC0.83□□□□□ -2.28
SIX4Q9UIU6 SNORA25.16-201ENST00000516741 121 ntBASIC0.83□□□□□ -2.28
SIX4Q9UIU6 CYP3A137P-201ENST00000562436 69 ntBASIC0.83□□□□□ -2.28
SIX4Q9UIU6 AC138749.4-201ENST00000563970 127 ntBASIC0.83□□□□□ -2.28
SIX4Q9UIU6 AC133485.1-201ENST00000567176 124 ntBASIC0.83□□□□□ -2.28
SIX4Q9UIU6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.83□□□□□ -2.28
SIX4Q9UIU6 Y_RNA.13-201ENST00000362403 112 ntBASIC0.82□□□□□ -2.28
SIX4Q9UIU6 Y_RNA.42-201ENST00000362660 108 ntBASIC0.82□□□□□ -2.28
SIX4Q9UIU6 SNORD115-35-201ENST00000365122 82 ntBASIC0.82□□□□□ -2.28
SIX4Q9UIU6 RNU6-364P-201ENST00000384387 107 ntBASIC0.82□□□□□ -2.28
SIX4Q9UIU6 MIR548J-201ENST00000408833 112 ntBASIC0.82□□□□□ -2.28
SIX4Q9UIU6 RNU7-102P-201ENST00000458948 62 ntBASIC0.82□□□□□ -2.28
SIX4Q9UIU6 RNU6-521P-201ENST00000516663 105 ntBASIC0.82□□□□□ -2.28
SIX4Q9UIU6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.82□□□□□ -2.28
SIX4Q9UIU6 SNORD92-201ENST00000585078 85 ntBASIC0.82□□□□□ -2.28
SIX4Q9UIU6 AL136317.1-201ENST00000612653 226 ntBASIC0.82□□□□□ -2.28
SIX4Q9UIU6 MIR6788-201ENST00000618842 66 ntBASIC0.82□□□□□ -2.28
SIX4Q9UIU6 Y_RNA.35-201ENST00000362601 101 ntBASIC0.81□□□□□ -2.28
SIX4Q9UIU6 SNORA63.5-201ENST00000363548 123 ntBASIC0.81□□□□□ -2.28
SIX4Q9UIU6 RNU6-1144P-201ENST00000384247 104 ntBASIC0.81□□□□□ -2.28
SIX4Q9UIU6 RNU6-476P-201ENST00000384726 107 ntBASIC0.81□□□□□ -2.28
SIX4Q9UIU6 RNU7-48P-201ENST00000458875 63 ntBASIC0.81□□□□□ -2.28
SIX4Q9UIU6 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
SIX4Q9UIU6 MIR6082-201ENST00000613604 109 ntBASIC0.81□□□□□ -2.28
SIX4Q9UIU6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU4-67P-201ENST00000364569 141 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 SNORD116-21-201ENST00000384507 92 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU6-816P-201ENST00000390914 107 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU1-119P-201ENST00000391122 165 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU6-1268P-201ENST00000391214 107 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU6-1239P-201ENST00000391310 107 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 SNORD99-201ENST00000408612 74 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU6-447P-201ENST00000410293 104 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU6-1118P-201ENST00000410382 104 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU6-1076P-201ENST00000410397 104 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU6-355P-201ENST00000410427 104 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU6-791P-201ENST00000410467 104 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU6-705P-201ENST00000410601 104 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU6-1064P-201ENST00000410626 104 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 SNORA7.5-201ENST00000410672 110 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU6-1100P-201ENST00000410691 104 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU6-860P-201ENST00000410860 104 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU6-1217P-201ENST00000411276 104 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU6-785P-201ENST00000411324 104 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 AL353813.1-201ENST00000440700 253 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 MIR4679-2-201ENST00000578358 77 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.8□□□□□ -2.28
SIX4Q9UIU6 U6.90-201ENST00000614007 104 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 MIR376B-201ENST00000614515 100 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 MIR6129-201ENST00000616087 109 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 U6.70-201ENST00000620287 104 ntBASIC0.8□□□□□ -2.28
SIX4Q9UIU6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.8□□□□□ -2.28
SIX4Q9UIU6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
SIX4Q9UIU6 RNU6-363P-201ENST00000362895 105 ntBASIC0.79□□□□□ -2.28
SIX4Q9UIU6 RNU6-865P-201ENST00000364772 107 ntBASIC0.79□□□□□ -2.28
SIX4Q9UIU6 RNU6-880P-201ENST00000384526 107 ntBASIC0.79□□□□□ -2.28
SIX4Q9UIU6 RNU6-1081P-201ENST00000384537 107 ntBASIC0.79□□□□□ -2.28
SIX4Q9UIU6 RNU6-429P-201ENST00000384582 108 ntBASIC0.79□□□□□ -2.28
SIX4Q9UIU6 MIR34C-201ENST00000384831 77 ntBASIC0.79□□□□□ -2.28
SIX4Q9UIU6 MIR605-201ENST00000385078 83 ntBASIC0.79□□□□□ -2.28
SIX4Q9UIU6 RNU6-531P-201ENST00000516694 104 ntBASIC0.79□□□□□ -2.28
SIX4Q9UIU6 DEFB131E-201ENST00000532329 154 ntBASIC0.79□□□□□ -2.28
SIX4Q9UIU6 AL162726.3-218ENST00000636401 95 ntBASIC0.79□□□□□ -2.28
SIX4Q9UIU6 Y_RNA.119-201ENST00000363301 96 ntBASIC0.78□□□□□ -2.28
SIX4Q9UIU6 RNY1P2-201ENST00000364820 117 ntBASIC0.78□□□□□ -2.28
SIX4Q9UIU6 Y_RNA.328-201ENST00000365208 113 ntBASIC0.78□□□□□ -2.28
SIX4Q9UIU6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
SIX4Q9UIU6 RNU6-679P-201ENST00000391003 106 ntBASIC0.78□□□□□ -2.28
SIX4Q9UIU6 MIR548I2-201ENST00000408348 149 ntBASIC0.78□□□□□ -2.28
SIX4Q9UIU6 AC025627.3-201ENST00000582078 182 ntBASIC0.78□□□□□ -2.28
SIX4Q9UIU6 MIR151B-201ENST00000584249 96 ntBASIC0.78□□□□□ -2.28
SIX4Q9UIU6 AP001362.1-201ENST00000625165 124 ntBASIC0.78□□□□□ -2.28
SIX4Q9UIU6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SIX4Q9UIU6 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
SIX4Q9UIU6 Y_RNA.85-201ENST00000363014 111 ntBASIC0.77□□□□□ -2.29
SIX4Q9UIU6 Y_RNA.116-201ENST00000363292 103 ntBASIC0.77□□□□□ -2.29
SIX4Q9UIU6 Y_RNA.155-201ENST00000363632 101 ntBASIC0.77□□□□□ -2.29
SIX4Q9UIU6 Y_RNA.291-201ENST00000364886 113 ntBASIC0.77□□□□□ -2.29
SIX4Q9UIU6 RNU6-1056P-201ENST00000383996 107 ntBASIC0.77□□□□□ -2.29
SIX4Q9UIU6 Y_RNA.507-201ENST00000384500 99 ntBASIC0.77□□□□□ -2.29
SIX4Q9UIU6 RPL39P34-201ENST00000477141 156 ntBASIC0.77□□□□□ -2.29
SIX4Q9UIU6 AC090897.1-201ENST00000580909 226 ntBASIC0.77□□□□□ -2.29
SIX4Q9UIU6 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
SIX4Q9UIU6 AL353765.1-201ENST00000605514 183 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms