Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 RNU6-1163P-201ENST00000364516 107 ntBASIC1.41□□□□□ -2.18
LRIT1Q9P2V4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.41□□□□□ -2.18
LRIT1Q9P2V4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
LRIT1Q9P2V4 RPL39P39-201ENST00000455840 151 ntBASIC1.41□□□□□ -2.18
LRIT1Q9P2V4 RNU7-48P-201ENST00000458875 63 ntBASIC1.41□□□□□ -2.18
LRIT1Q9P2V4 snoU13.21-201ENST00000459368 105 ntBASIC1.41□□□□□ -2.18
LRIT1Q9P2V4 RNU6-844P-201ENST00000517175 102 ntBASIC1.41□□□□□ -2.18
LRIT1Q9P2V4 MIR4264-201ENST00000583520 66 ntBASIC1.41□□□□□ -2.18
LRIT1Q9P2V4 AC020891.4-201ENST00000605745 93 ntBASIC1.41□□□□□ -2.18
LRIT1Q9P2V4 MIR6504-201ENST00000613520 61 ntBASIC1.41□□□□□ -2.18
LRIT1Q9P2V4 U7.3-201ENST00000616123 62 ntBASIC1.41□□□□□ -2.18
LRIT1Q9P2V4 AL161722.3-201ENST00000605789 2983 ntBASIC1.4□□□□□ -2.19
LRIT1Q9P2V4 MT-TN-201ENST00000387400 73 ntBASIC1.4□□□□□ -2.19
LRIT1Q9P2V4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
LRIT1Q9P2V4 U8.15-201ENST00000390947 134 ntBASIC1.4□□□□□ -2.19
LRIT1Q9P2V4 RNU6-1165P-201ENST00000410119 107 ntBASIC1.4□□□□□ -2.19
LRIT1Q9P2V4 RNU6-613P-201ENST00000410412 108 ntBASIC1.4□□□□□ -2.19
LRIT1Q9P2V4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.4□□□□□ -2.19
LRIT1Q9P2V4 RNU7-62P-201ENST00000458856 62 ntBASIC1.4□□□□□ -2.19
LRIT1Q9P2V4 RPL30P7-201ENST00000479312 323 ntBASIC1.4□□□□□ -2.19
LRIT1Q9P2V4 MIR2115-201ENST00000516657 100 ntBASIC1.4□□□□□ -2.19
LRIT1Q9P2V4 AL078603.1-201ENST00000603824 313 ntBASIC1.4□□□□□ -2.19
LRIT1Q9P2V4 AL157834.3-201ENST00000615543 103 ntBASIC1.4□□□□□ -2.19
LRIT1Q9P2V4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
LRIT1Q9P2V4 SNORD45B-201ENST00000364617 72 ntBASIC1.39□□□□□ -2.19
LRIT1Q9P2V4 RNU6-865P-201ENST00000364772 107 ntBASIC1.39□□□□□ -2.19
LRIT1Q9P2V4 RPS29P23-201ENST00000458635 123 ntBASIC1.39□□□□□ -2.19
LRIT1Q9P2V4 AC138749.4-201ENST00000563970 127 ntBASIC1.39□□□□□ -2.19
LRIT1Q9P2V4 MIR6734-201ENST00000621166 68 ntBASIC1.39□□□□□ -2.19
LRIT1Q9P2V4 MIR2052-201ENST00000636055 55 ntBASIC1.39□□□□□ -2.19
LRIT1Q9P2V4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
LRIT1Q9P2V4 SNORD38.1-201ENST00000363863 68 ntBASIC1.38□□□□□ -2.19
LRIT1Q9P2V4 Y_RNA.190-201ENST00000363964 101 ntBASIC1.38□□□□□ -2.19
LRIT1Q9P2V4 RNU6-580P-201ENST00000365159 107 ntBASIC1.38□□□□□ -2.19
LRIT1Q9P2V4 SNORD26-201ENST00000384147 75 ntBASIC1.38□□□□□ -2.19
LRIT1Q9P2V4 SNORA75.2-201ENST00000391138 150 ntBASIC1.38□□□□□ -2.19
LRIT1Q9P2V4 SNORA75.3-201ENST00000391231 150 ntBASIC1.38□□□□□ -2.19
LRIT1Q9P2V4 RPS29P28-201ENST00000446439 141 ntBASIC1.38□□□□□ -2.19
LRIT1Q9P2V4 RNA5SP220-201ENST00000516298 104 ntBASIC1.38□□□□□ -2.19
LRIT1Q9P2V4 AP000753.3-201ENST00000604083 169 ntBASIC1.38□□□□□ -2.19
LRIT1Q9P2V4 RNU6-86P-201ENST00000606534 107 ntBASIC1.38□□□□□ -2.19
LRIT1Q9P2V4 MIR377-201ENST00000362145 69 ntBASIC1.37□□□□□ -2.19
LRIT1Q9P2V4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.37□□□□□ -2.19
LRIT1Q9P2V4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.37□□□□□ -2.19
LRIT1Q9P2V4 Y_RNA.220-201ENST00000364244 109 ntBASIC1.37□□□□□ -2.19
LRIT1Q9P2V4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.37□□□□□ -2.19
LRIT1Q9P2V4 MIR1276-201ENST00000408707 83 ntBASIC1.37□□□□□ -2.19
LRIT1Q9P2V4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.37□□□□□ -2.19
LRIT1Q9P2V4 RN7SKP88-201ENST00000516847 250 ntBASIC1.37□□□□□ -2.19
LRIT1Q9P2V4 RNU11-2P-201ENST00000516898 142 ntBASIC1.37□□□□□ -2.19
LRIT1Q9P2V4 7SK.8-201ENST00000612110 250 ntBASIC1.37□□□□□ -2.19
LRIT1Q9P2V4 7SK.11-201ENST00000615477 250 ntBASIC1.37□□□□□ -2.19
LRIT1Q9P2V4 AL353770.2-201ENST00000620024 78 ntBASIC1.37□□□□□ -2.19
LRIT1Q9P2V4 7SK.13-201ENST00000622040 250 ntBASIC1.37□□□□□ -2.19
LRIT1Q9P2V4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.37□□□□□ -2.19
LRIT1Q9P2V4 RNU6-392P-201ENST00000364926 101 ntBASIC1.36□□□□□ -2.19
LRIT1Q9P2V4 Y_RNA.388-201ENST00000383919 113 ntBASIC1.36□□□□□ -2.19
LRIT1Q9P2V4 MIR320A-201ENST00000385302 82 ntBASIC1.36□□□□□ -2.19
LRIT1Q9P2V4 MIR548G-201ENST00000408442 89 ntBASIC1.36□□□□□ -2.19
LRIT1Q9P2V4 AC015818.7-201ENST00000428754 109 ntBASIC1.36□□□□□ -2.19
LRIT1Q9P2V4 AC087499.7-201ENST00000441958 109 ntBASIC1.36□□□□□ -2.19
LRIT1Q9P2V4 SNORA31.2-201ENST00000516019 134 ntBASIC1.36□□□□□ -2.19
LRIT1Q9P2V4 AC026421.1-201ENST00000519101 163 ntBASIC1.36□□□□□ -2.19
LRIT1Q9P2V4 AP001362.1-201ENST00000625165 124 ntBASIC1.36□□□□□ -2.19
LRIT1Q9P2V4 Y_RNA.98-201ENST00000363109 102 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 RNU6-1244P-201ENST00000363614 108 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 RNU6-447P-201ENST00000410293 104 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 RNU6-1118P-201ENST00000410382 104 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 RNU6-1076P-201ENST00000410397 104 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 RNU6-355P-201ENST00000410427 104 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 RNU6-791P-201ENST00000410467 104 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 RNU6-705P-201ENST00000410601 104 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 RNU6-1100P-201ENST00000410691 104 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 RNU6-860P-201ENST00000410860 104 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 RNU6-1217P-201ENST00000411276 104 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 RNU6-785P-201ENST00000411324 104 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 AC133485.1-201ENST00000567176 124 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 AC090897.1-201ENST00000580909 226 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 MIR4452-201ENST00000583004 71 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 AC096720.1-201ENST00000604441 183 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 AC062037.1-201ENST00000605302 128 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 AC103810.7-201ENST00000607821 91 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 U6.90-201ENST00000614007 104 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 U6.70-201ENST00000620287 104 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 U6.109-201ENST00000636749 87 ntBASIC1.35□□□□□ -2.19
LRIT1Q9P2V4 RNA5SP133-201ENST00000363368 119 ntBASIC1.34□□□□□ -2.19
LRIT1Q9P2V4 Y_RNA.173-201ENST00000363776 113 ntBASIC1.34□□□□□ -2.19
LRIT1Q9P2V4 RNY1P2-201ENST00000364820 117 ntBASIC1.34□□□□□ -2.19
LRIT1Q9P2V4 SNORA2B-201ENST00000384583 137 ntBASIC1.34□□□□□ -2.19
LRIT1Q9P2V4 Y_RNA.558-201ENST00000384685 113 ntBASIC1.34□□□□□ -2.19
LRIT1Q9P2V4 Y_RNA.593-201ENST00000410292 98 ntBASIC1.34□□□□□ -2.19
LRIT1Q9P2V4 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
LRIT1Q9P2V4 Y_RNA.705-201ENST00000516862 110 ntBASIC1.34□□□□□ -2.19
LRIT1Q9P2V4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.34□□□□□ -2.19
LRIT1Q9P2V4 AC012676.2-201ENST00000619258 186 ntBASIC1.34□□□□□ -2.19
LRIT1Q9P2V4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
LRIT1Q9P2V4 HSBP1P2-201ENST00000299671 229 ntBASIC1.33□□□□□ -2.2
LRIT1Q9P2V4 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
LRIT1Q9P2V4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 206.4 ms