Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR3179-2-201ENST00000579107 84 ntBASIC-0.95□□□□□ -2.56
VAPAQ9P0L0 MIR4500-201ENST00000579472 76 ntBASIC-0.95□□□□□ -2.56
VAPAQ9P0L0 MIR3179-3-201ENST00000579566 84 ntBASIC-0.95□□□□□ -2.56
VAPAQ9P0L0 AL132765.2-201ENST00000610812 351 ntBASIC-0.95□□□□□ -2.56
VAPAQ9P0L0 MIR3179-4-201ENST00000617599 84 ntBASIC-0.95□□□□□ -2.56
VAPAQ9P0L0 UBE2WP1-201ENST00000362030 340 ntBASIC-0.96□□□□□ -2.56
VAPAQ9P0L0 RNU4-36P-201ENST00000364294 144 ntBASIC-0.96□□□□□ -2.56
VAPAQ9P0L0 RNY1P6-201ENST00000384193 109 ntBASIC-0.96□□□□□ -2.56
VAPAQ9P0L0 RNU6-138P-201ENST00000515952 107 ntBASIC-0.96□□□□□ -2.56
VAPAQ9P0L0 SNORD22.1-201ENST00000516331 125 ntBASIC-0.96□□□□□ -2.56
VAPAQ9P0L0 MTND5P40-201ENST00000559945 246 ntBASIC-0.96□□□□□ -2.56
VAPAQ9P0L0 MIR548AX-201ENST00000580117 73 ntBASIC-0.96□□□□□ -2.56
VAPAQ9P0L0 AC145423.2-201ENST00000610631 239 ntBASIC-0.96□□□□□ -2.56
VAPAQ9P0L0 AC069503.3-201ENST00000618674 145 ntBASIC-0.96□□□□□ -2.56
VAPAQ9P0L0 SNORD115-2-201ENST00000362842 82 ntBASIC-0.97□□□□□ -2.56
VAPAQ9P0L0 SNORD115-20-201ENST00000365099 82 ntBASIC-0.97□□□□□ -2.56
VAPAQ9P0L0 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.97□□□□□ -2.56
VAPAQ9P0L0 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.97□□□□□ -2.56
VAPAQ9P0L0 AC093423.1-201ENST00000440817 142 ntBASIC-0.97□□□□□ -2.56
VAPAQ9P0L0 RNU7-195P-201ENST00000458793 62 ntBASIC-0.97□□□□□ -2.56
VAPAQ9P0L0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.97□□□□□ -2.56
VAPAQ9P0L0 uc_338.19-201ENST00000616808 99 ntBASIC-0.97□□□□□ -2.56
VAPAQ9P0L0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.97□□□□□ -2.56
VAPAQ9P0L0 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.98□□□□□ -2.57
VAPAQ9P0L0 RNU6-728P-201ENST00000365375 104 ntBASIC-0.98□□□□□ -2.57
VAPAQ9P0L0 SNORA49-201ENST00000386157 136 ntBASIC-0.98□□□□□ -2.57
VAPAQ9P0L0 MIR548AE2-201ENST00000583456 67 ntBASIC-0.98□□□□□ -2.57
VAPAQ9P0L0 MIR4499-201ENST00000584834 69 ntBASIC-0.98□□□□□ -2.57
VAPAQ9P0L0 AC011603.4-201ENST00000611325 277 ntBASIC-0.98□□□□□ -2.57
VAPAQ9P0L0 MIR8068-201ENST00000618032 68 ntBASIC-0.98□□□□□ -2.57
VAPAQ9P0L0 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.99□□□□□ -2.57
VAPAQ9P0L0 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.99□□□□□ -2.57
VAPAQ9P0L0 RNU6-450P-201ENST00000364654 107 ntBASIC-0.99□□□□□ -2.57
VAPAQ9P0L0 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.99□□□□□ -2.57
VAPAQ9P0L0 RNU6-524P-201ENST00000384270 107 ntBASIC-0.99□□□□□ -2.57
VAPAQ9P0L0 AP000533.3-201ENST00000447704 118 ntBASIC-0.99□□□□□ -2.57
VAPAQ9P0L0 RNA5SP395-201ENST00000516567 118 ntBASIC-0.99□□□□□ -2.57
VAPAQ9P0L0 SNORA40.15-201ENST00000516884 107 ntBASIC-0.99□□□□□ -2.57
VAPAQ9P0L0 Y_RNA.12-201ENST00000362393 112 ntBASIC-1□□□□□ -2.57
VAPAQ9P0L0 Y_RNA.31-201ENST00000362574 102 ntBASIC-1□□□□□ -2.57
VAPAQ9P0L0 Y_RNA.60-201ENST00000362831 98 ntBASIC-1□□□□□ -2.57
VAPAQ9P0L0 Y_RNA.70-201ENST00000362886 110 ntBASIC-1□□□□□ -2.57
VAPAQ9P0L0 Y_RNA.117-201ENST00000363294 101 ntBASIC-1□□□□□ -2.57
VAPAQ9P0L0 MIR652-201ENST00000385278 98 ntBASIC-1□□□□□ -2.57
VAPAQ9P0L0 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1□□□□□ -2.57
VAPAQ9P0L0 RNU7-55P-201ENST00000459426 62 ntBASIC-1□□□□□ -2.57
VAPAQ9P0L0 AC022137.1-201ENST00000483735 151 ntBASIC-1□□□□□ -2.57
VAPAQ9P0L0 SNORD116-25-201ENST00000516517 92 ntBASIC-1□□□□□ -2.57
VAPAQ9P0L0 MIR4460-201ENST00000577862 86 ntBASIC-1□□□□□ -2.57
VAPAQ9P0L0 MIR6086-201ENST00000638065 55 ntBASIC-1□□□□□ -2.57
VAPAQ9P0L0 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.01□□□□□ -2.57
VAPAQ9P0L0 MIR518B-201ENST00000385127 83 ntBASIC-1.01□□□□□ -2.57
VAPAQ9P0L0 RNU6-823P-201ENST00000391042 103 ntBASIC-1.01□□□□□ -2.57
VAPAQ9P0L0 MTATP6P23-201ENST00000440153 476 ntBASIC-1.01□□□□□ -2.57
VAPAQ9P0L0 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.01□□□□□ -2.57
VAPAQ9P0L0 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.02□□□□□ -2.57
VAPAQ9P0L0 SNORD114-15-201ENST00000364687 72 ntBASIC-1.02□□□□□ -2.57
VAPAQ9P0L0 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.02□□□□□ -2.57
VAPAQ9P0L0 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.02□□□□□ -2.57
VAPAQ9P0L0 SNORD64-201ENST00000386683 67 ntBASIC-1.02□□□□□ -2.57
VAPAQ9P0L0 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.02□□□□□ -2.57
VAPAQ9P0L0 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.02□□□□□ -2.57
VAPAQ9P0L0 MIR1252-201ENST00000408861 65 ntBASIC-1.02□□□□□ -2.57
VAPAQ9P0L0 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.02□□□□□ -2.57
VAPAQ9P0L0 RNU6-431P-201ENST00000383874 107 ntBASIC-1.03□□□□□ -2.57
VAPAQ9P0L0 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.03□□□□□ -2.57
VAPAQ9P0L0 SNORA51.5-201ENST00000384126 131 ntBASIC-1.03□□□□□ -2.57
VAPAQ9P0L0 MIR624-201ENST00000385217 97 ntBASIC-1.03□□□□□ -2.57
VAPAQ9P0L0 AC138393.2-201ENST00000414742 246 ntBASIC-1.03□□□□□ -2.57
VAPAQ9P0L0 RNU7-106P-201ENST00000459514 67 ntBASIC-1.03□□□□□ -2.57
VAPAQ9P0L0 AC097510.1-201ENST00000510945 133 ntBASIC-1.03□□□□□ -2.57
VAPAQ9P0L0 SERF1AP1-201ENST00000514575 187 ntBASIC-1.03□□□□□ -2.57
VAPAQ9P0L0 RNY3P15-201ENST00000516297 97 ntBASIC-1.03□□□□□ -2.57
VAPAQ9P0L0 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.03□□□□□ -2.57
VAPAQ9P0L0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.03□□□□□ -2.57
VAPAQ9P0L0 MIR20A-201ENST00000362279 71 ntBASIC-1.04□□□□□ -2.58
VAPAQ9P0L0 SNORD115-25-201ENST00000362619 82 ntBASIC-1.04□□□□□ -2.58
VAPAQ9P0L0 SNORD115-35-201ENST00000365122 82 ntBASIC-1.04□□□□□ -2.58
VAPAQ9P0L0 RNY4P3-201ENST00000365254 95 ntBASIC-1.04□□□□□ -2.58
VAPAQ9P0L0 RNU6-571P-201ENST00000384128 107 ntBASIC-1.04□□□□□ -2.58
VAPAQ9P0L0 RNU6-905P-201ENST00000384434 107 ntBASIC-1.04□□□□□ -2.58
VAPAQ9P0L0 MIR617-201ENST00000385030 97 ntBASIC-1.04□□□□□ -2.58
VAPAQ9P0L0 MIR548I2-201ENST00000408348 149 ntBASIC-1.04□□□□□ -2.58
VAPAQ9P0L0 RNU6-101P-201ENST00000410323 104 ntBASIC-1.04□□□□□ -2.58
VAPAQ9P0L0 SNORD63B-201ENST00000411005 70 ntBASIC-1.04□□□□□ -2.58
VAPAQ9P0L0 RNU6-274P-201ENST00000459566 107 ntBASIC-1.04□□□□□ -2.58
VAPAQ9P0L0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.04□□□□□ -2.58
VAPAQ9P0L0 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.04□□□□□ -2.58
VAPAQ9P0L0 U6atac.1-201ENST00000616025 117 ntBASIC-1.04□□□□□ -2.58
VAPAQ9P0L0 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.05□□□□□ -2.58
VAPAQ9P0L0 RNU6-770P-201ENST00000363929 105 ntBASIC-1.05□□□□□ -2.58
VAPAQ9P0L0 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.05□□□□□ -2.58
VAPAQ9P0L0 RNU6-978P-201ENST00000364371 103 ntBASIC-1.05□□□□□ -2.58
VAPAQ9P0L0 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.05□□□□□ -2.58
VAPAQ9P0L0 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.05□□□□□ -2.58
VAPAQ9P0L0 RNU6-381P-201ENST00000391259 108 ntBASIC-1.05□□□□□ -2.58
VAPAQ9P0L0 RNU4-43P-201ENST00000410628 137 ntBASIC-1.05□□□□□ -2.58
VAPAQ9P0L0 ELOCP20-201ENST00000422460 345 ntBASIC-1.05□□□□□ -2.58
VAPAQ9P0L0 SCARNA17-201ENST00000516183 144 ntBASIC-1.05□□□□□ -2.58
VAPAQ9P0L0 AC140658.3-201ENST00000567603 271 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms