Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.66□□□□□ -2.52
CCDC59Q9P031 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.66□□□□□ -2.52
CCDC59Q9P031 RNU6-811P-201ENST00000384069 107 ntBASIC-0.66□□□□□ -2.52
CCDC59Q9P031 RNU6-713P-201ENST00000384761 107 ntBASIC-0.66□□□□□ -2.52
CCDC59Q9P031 RNU7-48P-201ENST00000458875 63 ntBASIC-0.66□□□□□ -2.52
CCDC59Q9P031 RNU7-74P-201ENST00000459104 62 ntBASIC-0.66□□□□□ -2.52
CCDC59Q9P031 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.66□□□□□ -2.52
CCDC59Q9P031 RNA5SP236-201ENST00000516169 116 ntBASIC-0.66□□□□□ -2.52
CCDC59Q9P031 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.66□□□□□ -2.52
CCDC59Q9P031 MIR6507-201ENST00000613630 70 ntBASIC-0.66□□□□□ -2.52
CCDC59Q9P031 RN7SL660P-201ENST00000614852 299 ntBASIC-0.66□□□□□ -2.52
CCDC59Q9P031 FTX_2.1-201ENST00000618816 94 ntBASIC-0.66□□□□□ -2.52
CCDC59Q9P031 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.67□□□□□ -2.52
CCDC59Q9P031 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.67□□□□□ -2.52
CCDC59Q9P031 MIR196A2-201ENST00000385189 110 ntBASIC-0.67□□□□□ -2.52
CCDC59Q9P031 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.67□□□□□ -2.52
CCDC59Q9P031 RNU2-4P-201ENST00000606190 192 ntBASIC-0.67□□□□□ -2.52
CCDC59Q9P031 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.68□□□□□ -2.52
CCDC59Q9P031 U8.6-201ENST00000364939 135 ntBASIC-0.68□□□□□ -2.52
CCDC59Q9P031 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.68□□□□□ -2.52
CCDC59Q9P031 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.68□□□□□ -2.52
CCDC59Q9P031 MIR206-201ENST00000384872 86 ntBASIC-0.68□□□□□ -2.52
CCDC59Q9P031 MIR519A1-201ENST00000385257 85 ntBASIC-0.68□□□□□ -2.52
CCDC59Q9P031 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.68□□□□□ -2.52
CCDC59Q9P031 MIR548I2-201ENST00000408348 149 ntBASIC-0.68□□□□□ -2.52
CCDC59Q9P031 RNU7-195P-201ENST00000458793 62 ntBASIC-0.68□□□□□ -2.52
CCDC59Q9P031 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.68□□□□□ -2.52
CCDC59Q9P031 RNY3P16-201ENST00000516338 101 ntBASIC-0.68□□□□□ -2.52
CCDC59Q9P031 MIR4643-201ENST00000577473 78 ntBASIC-0.68□□□□□ -2.52
CCDC59Q9P031 MIR3171-201ENST00000584270 74 ntBASIC-0.68□□□□□ -2.52
CCDC59Q9P031 MIR655-201ENST00000362159 97 ntBASIC-0.69□□□□□ -2.52
CCDC59Q9P031 RNU1-141P-201ENST00000364623 158 ntBASIC-0.69□□□□□ -2.52
CCDC59Q9P031 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.69□□□□□ -2.52
CCDC59Q9P031 RNU6-985P-201ENST00000410182 104 ntBASIC-0.69□□□□□ -2.52
CCDC59Q9P031 RNU4-69P-201ENST00000410677 143 ntBASIC-0.69□□□□□ -2.52
CCDC59Q9P031 SNORD63B-201ENST00000411005 70 ntBASIC-0.69□□□□□ -2.52
CCDC59Q9P031 RNA5SP480-201ENST00000516840 109 ntBASIC-0.69□□□□□ -2.52
CCDC59Q9P031 MIR4473-201ENST00000583731 91 ntBASIC-0.69□□□□□ -2.52
CCDC59Q9P031 MIR6759-201ENST00000638110 65 ntBASIC-0.69□□□□□ -2.52
CCDC59Q9P031 RNA5SP205-201ENST00000364653 136 ntBASIC-0.7□□□□□ -2.52
CCDC59Q9P031 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.7□□□□□ -2.52
CCDC59Q9P031 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.7□□□□□ -2.52
CCDC59Q9P031 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.7□□□□□ -2.52
CCDC59Q9P031 RNU6-240P-201ENST00000516098 97 ntBASIC-0.7□□□□□ -2.52
CCDC59Q9P031 RNA5SP285-201ENST00000516619 119 ntBASIC-0.7□□□□□ -2.52
CCDC59Q9P031 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.7□□□□□ -2.52
CCDC59Q9P031 RNU7-188P-201ENST00000517063 64 ntBASIC-0.7□□□□□ -2.52
CCDC59Q9P031 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.7□□□□□ -2.52
CCDC59Q9P031 MTND5P40-201ENST00000559945 246 ntBASIC-0.7□□□□□ -2.52
CCDC59Q9P031 AC011603.4-201ENST00000611325 277 ntBASIC-0.7□□□□□ -2.52
CCDC59Q9P031 AP001362.1-201ENST00000625165 124 ntBASIC-0.7□□□□□ -2.52
CCDC59Q9P031 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.71□□□□□ -2.52
CCDC59Q9P031 RNU6-524P-201ENST00000384270 107 ntBASIC-0.71□□□□□ -2.52
CCDC59Q9P031 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.71□□□□□ -2.52
CCDC59Q9P031 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.71□□□□□ -2.52
CCDC59Q9P031 RNU6-493P-201ENST00000391321 108 ntBASIC-0.71□□□□□ -2.52
CCDC59Q9P031 RNA5SP451-201ENST00000410588 110 ntBASIC-0.71□□□□□ -2.52
CCDC59Q9P031 RPS29P8-201ENST00000445109 171 ntBASIC-0.71□□□□□ -2.52
CCDC59Q9P031 RNU7-164P-201ENST00000459221 62 ntBASIC-0.71□□□□□ -2.52
CCDC59Q9P031 AC138907.4-201ENST00000570107 226 ntBASIC-0.71□□□□□ -2.52
CCDC59Q9P031 AP001180.6-201ENST00000584918 159 ntBASIC-0.71□□□□□ -2.52
CCDC59Q9P031 AC021443.1-201ENST00000604478 211 ntBASIC-0.71□□□□□ -2.52
CCDC59Q9P031 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.71□□□□□ -2.52
CCDC59Q9P031 RNU6-170P-201ENST00000362832 104 ntBASIC-0.72□□□□□ -2.52
CCDC59Q9P031 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.72□□□□□ -2.52
CCDC59Q9P031 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.72□□□□□ -2.52
CCDC59Q9P031 AC020661.2-201ENST00000560114 134 ntBASIC-0.72□□□□□ -2.52
CCDC59Q9P031 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.73□□□□□ -2.53
CCDC59Q9P031 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.73□□□□□ -2.53
CCDC59Q9P031 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.73□□□□□ -2.53
CCDC59Q9P031 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.73□□□□□ -2.53
CCDC59Q9P031 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.73□□□□□ -2.53
CCDC59Q9P031 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.73□□□□□ -2.53
CCDC59Q9P031 MT-TW-201ENST00000387382 68 ntBASIC-0.73□□□□□ -2.53
CCDC59Q9P031 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.73□□□□□ -2.53
CCDC59Q9P031 MIR1302-6-201ENST00000408466 90 ntBASIC-0.73□□□□□ -2.53
CCDC59Q9P031 RNU7-123P-201ENST00000515911 60 ntBASIC-0.73□□□□□ -2.53
CCDC59Q9P031 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.73□□□□□ -2.53
CCDC59Q9P031 uc_338.10-201ENST00000621872 182 ntBASIC-0.73□□□□□ -2.53
CCDC59Q9P031 U6.104-201ENST00000637979 90 ntBASIC-0.73□□□□□ -2.53
CCDC59Q9P031 RNA5SP257-201ENST00000363023 116 ntBASIC-0.74□□□□□ -2.53
CCDC59Q9P031 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.74□□□□□ -2.53
CCDC59Q9P031 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.74□□□□□ -2.53
CCDC59Q9P031 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.74□□□□□ -2.53
CCDC59Q9P031 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.74□□□□□ -2.53
CCDC59Q9P031 MIR181B2-201ENST00000385004 89 ntBASIC-0.74□□□□□ -2.53
CCDC59Q9P031 SNORD77B-201ENST00000391112 67 ntBASIC-0.74□□□□□ -2.53
CCDC59Q9P031 RNU6-284P-201ENST00000411105 106 ntBASIC-0.74□□□□□ -2.53
CCDC59Q9P031 AL590491.3-201ENST00000610731 82 ntBASIC-0.74□□□□□ -2.53
CCDC59Q9P031 AC069503.3-201ENST00000618674 145 ntBASIC-0.74□□□□□ -2.53
CCDC59Q9P031 MIR101-1-201ENST00000362265 75 ntBASIC-0.75□□□□□ -2.53
CCDC59Q9P031 RNA5SP98-201ENST00000363158 137 ntBASIC-0.75□□□□□ -2.53
CCDC59Q9P031 SNORD114-11-201ENST00000363738 75 ntBASIC-0.75□□□□□ -2.53
CCDC59Q9P031 RNU6-275P-201ENST00000364910 107 ntBASIC-0.75□□□□□ -2.53
CCDC59Q9P031 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.75□□□□□ -2.53
CCDC59Q9P031 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.75□□□□□ -2.53
CCDC59Q9P031 SNORD75.1-201ENST00000408373 60 ntBASIC-0.75□□□□□ -2.53
CCDC59Q9P031 RNU7-2P-201ENST00000516096 62 ntBASIC-0.75□□□□□ -2.53
CCDC59Q9P031 YWHAEP2-201ENST00000580066 112 ntBASIC-0.75□□□□□ -2.53
CCDC59Q9P031 AC009779.6-201ENST00000603972 165 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms