Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 MIR4764-201ENST00000580680 88 ntBASIC2.2□□□□□ -2.06
LMCD1Q9NZU5 AL512598.1-201ENST00000610158 273 ntBASIC2.2□□□□□ -2.06
LMCD1Q9NZU5 AC008133.2-201ENST00000624540 351 ntBASIC2.2□□□□□ -2.06
LMCD1Q9NZU5 MIR1297-201ENST00000637311 77 ntBASIC2.2□□□□□ -2.06
LMCD1Q9NZU5 Z97988.1-201ENST00000637697 135 ntBASIC2.2□□□□□ -2.06
LMCD1Q9NZU5 Y_RNA.118-201ENST00000363300 101 ntBASIC2.19□□□□□ -2.06
LMCD1Q9NZU5 SNORD115-31-201ENST00000365318 82 ntBASIC2.19□□□□□ -2.06
LMCD1Q9NZU5 MIR9-2-201ENST00000384838 87 ntBASIC2.19□□□□□ -2.06
LMCD1Q9NZU5 MIR17-201ENST00000385012 84 ntBASIC2.19□□□□□ -2.06
LMCD1Q9NZU5 Y_RNA.596-201ENST00000410462 109 ntBASIC2.19□□□□□ -2.06
LMCD1Q9NZU5 RNU6-141P-201ENST00000410499 105 ntBASIC2.19□□□□□ -2.06
LMCD1Q9NZU5 RNU6-807P-201ENST00000516805 107 ntBASIC2.19□□□□□ -2.06
LMCD1Q9NZU5 MIR548AO-201ENST00000579992 96 ntBASIC2.19□□□□□ -2.06
LMCD1Q9NZU5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
LMCD1Q9NZU5 SNORA17.3-201ENST00000391159 129 ntBASIC2.18□□□□□ -2.06
LMCD1Q9NZU5 SNRPGP12-201ENST00000449481 213 ntBASIC2.18□□□□□ -2.06
LMCD1Q9NZU5 Y_RNA.648-201ENST00000459455 110 ntBASIC2.18□□□□□ -2.06
LMCD1Q9NZU5 RNA5SP445-201ENST00000515889 115 ntBASIC2.18□□□□□ -2.06
LMCD1Q9NZU5 RNU7-193P-201ENST00000516723 65 ntBASIC2.18□□□□□ -2.06
LMCD1Q9NZU5 SNORA31.25-201ENST00000517242 134 ntBASIC2.18□□□□□ -2.06
LMCD1Q9NZU5 CYP3A52P-201ENST00000563326 91 ntBASIC2.18□□□□□ -2.06
LMCD1Q9NZU5 AC012493.3-201ENST00000604494 112 ntBASIC2.18□□□□□ -2.06
LMCD1Q9NZU5 MIR8066-201ENST00000617280 78 ntBASIC2.18□□□□□ -2.06
LMCD1Q9NZU5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LMCD1Q9NZU5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
LMCD1Q9NZU5 RNY1P13-201ENST00000365030 105 ntBASIC2.17□□□□□ -2.06
LMCD1Q9NZU5 SNORA25.9-201ENST00000365087 128 ntBASIC2.17□□□□□ -2.06
LMCD1Q9NZU5 RNU6-1241P-201ENST00000384536 107 ntBASIC2.17□□□□□ -2.06
LMCD1Q9NZU5 RNU7-43P-201ENST00000516554 64 ntBASIC2.17□□□□□ -2.06
LMCD1Q9NZU5 RNA5SP364-201ENST00000516938 78 ntBASIC2.17□□□□□ -2.06
LMCD1Q9NZU5 AC005520.4-201ENST00000604337 90 ntBASIC2.17□□□□□ -2.06
LMCD1Q9NZU5 MIR8070-201ENST00000616510 88 ntBASIC2.17□□□□□ -2.06
LMCD1Q9NZU5 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.17□□□□□ -2.06
LMCD1Q9NZU5 RNU6-499P-201ENST00000365615 107 ntBASIC2.16□□□□□ -2.06
LMCD1Q9NZU5 RNU6-203P-201ENST00000384038 104 ntBASIC2.16□□□□□ -2.06
LMCD1Q9NZU5 RNU6-811P-201ENST00000384069 107 ntBASIC2.16□□□□□ -2.06
LMCD1Q9NZU5 MIR518E-201ENST00000385252 88 ntBASIC2.16□□□□□ -2.06
LMCD1Q9NZU5 SNORD77.2-201ENST00000391045 68 ntBASIC2.16□□□□□ -2.06
LMCD1Q9NZU5 RNU6-663P-201ENST00000391105 106 ntBASIC2.16□□□□□ -2.06
LMCD1Q9NZU5 RNA5SP100-201ENST00000410903 110 ntBASIC2.16□□□□□ -2.06
LMCD1Q9NZU5 RNA5SP59-201ENST00000410922 110 ntBASIC2.16□□□□□ -2.06
LMCD1Q9NZU5 RNA5SP450-201ENST00000411206 102 ntBASIC2.16□□□□□ -2.06
LMCD1Q9NZU5 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.16□□□□□ -2.06
LMCD1Q9NZU5 RNU6-303P-201ENST00000517091 106 ntBASIC2.16□□□□□ -2.06
LMCD1Q9NZU5 RNU7-156P-201ENST00000517214 74 ntBASIC2.16□□□□□ -2.06
LMCD1Q9NZU5 AL359821.1-201ENST00000605519 182 ntBASIC2.16□□□□□ -2.06
LMCD1Q9NZU5 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.16□□□□□ -2.06
LMCD1Q9NZU5 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.16□□□□□ -2.06
LMCD1Q9NZU5 RNU6-132P-201ENST00000383863 107 ntBASIC2.15□□□□□ -2.07
LMCD1Q9NZU5 AC027119.1-201ENST00000440877 241 ntBASIC2.15□□□□□ -2.07
LMCD1Q9NZU5 SNORA18.5-201ENST00000516616 101 ntBASIC2.15□□□□□ -2.07
LMCD1Q9NZU5 SNORA31.17-201ENST00000516953 127 ntBASIC2.15□□□□□ -2.07
LMCD1Q9NZU5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.15□□□□□ -2.07
LMCD1Q9NZU5 MIR4251-201ENST00000635819 61 ntBASIC2.15□□□□□ -2.07
LMCD1Q9NZU5 SNORD38B-201ENST00000384690 67 ntBASIC2.14□□□□□ -2.07
LMCD1Q9NZU5 AC245517.4-201ENST00000448601 281 ntBASIC2.14□□□□□ -2.07
LMCD1Q9NZU5 TRMT112P2-201ENST00000512910 132 ntBASIC2.14□□□□□ -2.07
LMCD1Q9NZU5 RNU6-75P-201ENST00000515944 104 ntBASIC2.14□□□□□ -2.07
LMCD1Q9NZU5 AC090897.1-201ENST00000580909 226 ntBASIC2.14□□□□□ -2.07
LMCD1Q9NZU5 AL096840.1-201ENST00000603287 93 ntBASIC2.14□□□□□ -2.07
LMCD1Q9NZU5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.14□□□□□ -2.07
LMCD1Q9NZU5 SNORD38B-202ENST00000625943 69 ntBASIC2.14□□□□□ -2.07
LMCD1Q9NZU5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
LMCD1Q9NZU5 SNORD90-201ENST00000391145 111 ntBASIC2.13□□□□□ -2.07
LMCD1Q9NZU5 RNA5SP237-201ENST00000410414 113 ntBASIC2.13□□□□□ -2.07
LMCD1Q9NZU5 RPS29P11-201ENST00000496507 171 ntBASIC2.13□□□□□ -2.07
LMCD1Q9NZU5 RNU7-41P-201ENST00000515917 61 ntBASIC2.13□□□□□ -2.07
LMCD1Q9NZU5 MIR3064-201ENST00000581130 66 ntBASIC2.13□□□□□ -2.07
LMCD1Q9NZU5 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.13□□□□□ -2.07
LMCD1Q9NZU5 RNU6-208P-201ENST00000362431 107 ntBASIC2.12□□□□□ -2.07
LMCD1Q9NZU5 RNY1P2-201ENST00000364820 117 ntBASIC2.12□□□□□ -2.07
LMCD1Q9NZU5 RNA5SP190-201ENST00000365222 118 ntBASIC2.12□□□□□ -2.07
LMCD1Q9NZU5 SNORA67.5-201ENST00000391036 107 ntBASIC2.12□□□□□ -2.07
LMCD1Q9NZU5 RNU6-850P-201ENST00000516934 103 ntBASIC2.12□□□□□ -2.07
LMCD1Q9NZU5 RNU2-19P-201ENST00000517288 84 ntBASIC2.12□□□□□ -2.07
LMCD1Q9NZU5 MIR3935-201ENST00000583472 104 ntBASIC2.12□□□□□ -2.07
LMCD1Q9NZU5 AC104996.3-201ENST00000590718 94 ntBASIC2.12□□□□□ -2.07
LMCD1Q9NZU5 Y_RNA.783-201ENST00000613546 102 ntBASIC2.12□□□□□ -2.07
LMCD1Q9NZU5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LMCD1Q9NZU5 RNU6-330P-201ENST00000363015 107 ntBASIC2.11□□□□□ -2.07
LMCD1Q9NZU5 Y_RNA.264-201ENST00000364665 102 ntBASIC2.11□□□□□ -2.07
LMCD1Q9NZU5 MIR154-201ENST00000385243 84 ntBASIC2.11□□□□□ -2.07
LMCD1Q9NZU5 RNU6-360P-201ENST00000390944 104 ntBASIC2.11□□□□□ -2.07
LMCD1Q9NZU5 AP1B1P2-201ENST00000416196 106 ntBASIC2.11□□□□□ -2.07
LMCD1Q9NZU5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.11□□□□□ -2.07
LMCD1Q9NZU5 AC141846.1-201ENST00000568348 142 ntBASIC2.11□□□□□ -2.07
LMCD1Q9NZU5 AP000753.3-201ENST00000604083 169 ntBASIC2.11□□□□□ -2.07
LMCD1Q9NZU5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.11□□□□□ -2.07
LMCD1Q9NZU5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
LMCD1Q9NZU5 SNORA72.6-201ENST00000384520 129 ntBASIC2.1□□□□□ -2.07
LMCD1Q9NZU5 AC093423.1-201ENST00000440817 142 ntBASIC2.1□□□□□ -2.07
LMCD1Q9NZU5 HSPE1P24-201ENST00000450782 238 ntBASIC2.1□□□□□ -2.07
LMCD1Q9NZU5 AC009474.2-201ENST00000451383 136 ntBASIC2.1□□□□□ -2.07
LMCD1Q9NZU5 AC023790.1-201ENST00000482174 347 ntBASIC2.1□□□□□ -2.07
LMCD1Q9NZU5 SNORA25.15-201ENST00000516487 89 ntBASIC2.1□□□□□ -2.07
LMCD1Q9NZU5 AC133485.1-201ENST00000567176 124 ntBASIC2.1□□□□□ -2.07
LMCD1Q9NZU5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
LMCD1Q9NZU5 RNU6-1123P-201ENST00000362347 106 ntBASIC2.09□□□□□ -2.07
LMCD1Q9NZU5 Y_RNA.36-201ENST00000362602 112 ntBASIC2.09□□□□□ -2.07
LMCD1Q9NZU5 Y_RNA.491-201ENST00000384417 107 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 239.9 ms