Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SNORD115-17-201ENST00000364612 82 ntBASIC0.72□□□□□ -2.29
LIN7CQ9NUP9 SNORA25.9-201ENST00000365087 128 ntBASIC0.72□□□□□ -2.29
LIN7CQ9NUP9 SNORD115-35-201ENST00000365122 82 ntBASIC0.72□□□□□ -2.29
LIN7CQ9NUP9 MIR1276-201ENST00000408707 83 ntBASIC0.72□□□□□ -2.29
LIN7CQ9NUP9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.72□□□□□ -2.29
LIN7CQ9NUP9 RNU7-48P-201ENST00000458875 63 ntBASIC0.72□□□□□ -2.29
LIN7CQ9NUP9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.72□□□□□ -2.29
LIN7CQ9NUP9 Y_RNA.98-201ENST00000363109 102 ntBASIC0.71□□□□□ -2.3
LIN7CQ9NUP9 SNORD114-27-201ENST00000363766 70 ntBASIC0.71□□□□□ -2.3
LIN7CQ9NUP9 Y_RNA.346-201ENST00000365385 112 ntBASIC0.71□□□□□ -2.3
LIN7CQ9NUP9 Y_RNA.536-201ENST00000384621 113 ntBASIC0.71□□□□□ -2.3
LIN7CQ9NUP9 Y_RNA.676-201ENST00000516393 96 ntBASIC0.71□□□□□ -2.3
LIN7CQ9NUP9 MIR6504-201ENST00000613520 61 ntBASIC0.71□□□□□ -2.3
LIN7CQ9NUP9 RNU4-45P-201ENST00000365469 141 ntBASIC0.7□□□□□ -2.3
LIN7CQ9NUP9 RNU6-291P-201ENST00000384720 107 ntBASIC0.7□□□□□ -2.3
LIN7CQ9NUP9 RNU6-535P-201ENST00000384722 107 ntBASIC0.7□□□□□ -2.3
LIN7CQ9NUP9 MIR548D2-201ENST00000384955 97 ntBASIC0.7□□□□□ -2.3
LIN7CQ9NUP9 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
LIN7CQ9NUP9 RNU6-1194P-201ENST00000516208 104 ntBASIC0.7□□□□□ -2.3
LIN7CQ9NUP9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.7□□□□□ -2.3
LIN7CQ9NUP9 MIR1255B1-201ENST00000636325 63 ntBASIC0.7□□□□□ -2.3
LIN7CQ9NUP9 MIR101-2-201ENST00000362195 79 ntBASIC0.69□□□□□ -2.3
LIN7CQ9NUP9 RNU1-93P-201ENST00000364704 169 ntBASIC0.69□□□□□ -2.3
LIN7CQ9NUP9 RNU6-865P-201ENST00000364772 107 ntBASIC0.69□□□□□ -2.3
LIN7CQ9NUP9 Y_RNA.328-201ENST00000365208 113 ntBASIC0.69□□□□□ -2.3
LIN7CQ9NUP9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.69□□□□□ -2.3
LIN7CQ9NUP9 RNU6-521P-201ENST00000516663 105 ntBASIC0.69□□□□□ -2.3
LIN7CQ9NUP9 MIR3678-201ENST00000578455 94 ntBASIC0.69□□□□□ -2.3
LIN7CQ9NUP9 uc_338.16-201ENST00000621804 95 ntBASIC0.69□□□□□ -2.3
LIN7CQ9NUP9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 MIR96-201ENST00000362288 78 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 Y_RNA.32-201ENST00000362589 110 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 RNY4P6-201ENST00000363667 96 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 Y_RNA.191-201ENST00000363972 113 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 RNU6-429P-201ENST00000384582 108 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 MIR146A-201ENST00000385201 99 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 MIR644A-201ENST00000385262 94 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 MIR140-201ENST00000385282 100 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 RNU6-679P-201ENST00000391003 106 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 TMSB4XP3-201ENST00000445144 114 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 RNU6-659P-201ENST00000516454 104 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 SNORA31.14-201ENST00000516728 116 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 MIR4500-201ENST00000579472 76 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 MIR6767-201ENST00000637302 66 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 MIR3914-2-201ENST00000637339 95 ntBASIC0.68□□□□□ -2.3
LIN7CQ9NUP9 Y_RNA.344-201ENST00000365381 112 ntBASIC0.67□□□□□ -2.3
LIN7CQ9NUP9 MIR499A-201ENST00000384903 122 ntBASIC0.67□□□□□ -2.3
LIN7CQ9NUP9 MIR376B-201ENST00000614515 100 ntBASIC0.67□□□□□ -2.3
LIN7CQ9NUP9 AP001362.1-201ENST00000625165 124 ntBASIC0.67□□□□□ -2.3
LIN7CQ9NUP9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
LIN7CQ9NUP9 Y_RNA.174-201ENST00000363781 105 ntBASIC0.66□□□□□ -2.3
LIN7CQ9NUP9 SNORD116-14-201ENST00000383894 92 ntBASIC0.66□□□□□ -2.3
LIN7CQ9NUP9 SNORD116-17-201ENST00000383929 92 ntBASIC0.66□□□□□ -2.3
LIN7CQ9NUP9 SNORD116-15-201ENST00000384445 92 ntBASIC0.66□□□□□ -2.3
LIN7CQ9NUP9 RNU6-959P-201ENST00000384671 107 ntBASIC0.66□□□□□ -2.3
LIN7CQ9NUP9 SNORD116-19-201ENST00000384729 92 ntBASIC0.66□□□□□ -2.3
LIN7CQ9NUP9 RNU6-469P-201ENST00000516253 101 ntBASIC0.66□□□□□ -2.3
LIN7CQ9NUP9 Y_RNA.712-201ENST00000517011 92 ntBASIC0.66□□□□□ -2.3
LIN7CQ9NUP9 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
LIN7CQ9NUP9 MIR373-201ENST00000362273 69 ntBASIC0.65□□□□□ -2.31
LIN7CQ9NUP9 Y_RNA.127-201ENST00000363386 109 ntBASIC0.65□□□□□ -2.31
LIN7CQ9NUP9 AL603908.1-201ENST00000406098 201 ntBASIC0.65□□□□□ -2.31
LIN7CQ9NUP9 SNORA7.5-201ENST00000410672 110 ntBASIC0.65□□□□□ -2.31
LIN7CQ9NUP9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.65□□□□□ -2.31
LIN7CQ9NUP9 MIR3973-201ENST00000579824 107 ntBASIC0.65□□□□□ -2.31
LIN7CQ9NUP9 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
LIN7CQ9NUP9 RNA5SP245-201ENST00000364239 121 ntBASIC0.64□□□□□ -2.31
LIN7CQ9NUP9 RNU4-67P-201ENST00000364569 141 ntBASIC0.64□□□□□ -2.31
LIN7CQ9NUP9 SNORD114-22-201ENST00000365423 72 ntBASIC0.64□□□□□ -2.31
LIN7CQ9NUP9 RNU6-81P-201ENST00000365608 104 ntBASIC0.64□□□□□ -2.31
LIN7CQ9NUP9 MIR34C-201ENST00000384831 77 ntBASIC0.64□□□□□ -2.31
LIN7CQ9NUP9 AC004941.2-201ENST00000427009 228 ntBASIC0.64□□□□□ -2.31
LIN7CQ9NUP9 MIR4698-201ENST00000577795 80 ntBASIC0.64□□□□□ -2.31
LIN7CQ9NUP9 MIR4452-201ENST00000583004 71 ntBASIC0.64□□□□□ -2.31
LIN7CQ9NUP9 Y_RNA.56-201ENST00000362798 112 ntBASIC0.63□□□□□ -2.31
LIN7CQ9NUP9 SNORA63.5-201ENST00000363548 123 ntBASIC0.63□□□□□ -2.31
LIN7CQ9NUP9 Y_RNA.649-201ENST00000459077 103 ntBASIC0.63□□□□□ -2.31
LIN7CQ9NUP9 RNU6-1333P-201ENST00000516162 93 ntBASIC0.63□□□□□ -2.31
LIN7CQ9NUP9 SNORD33.1-201ENST00000516213 88 ntBASIC0.63□□□□□ -2.31
LIN7CQ9NUP9 HSBP1P2-201ENST00000299671 229 ntBASIC0.62□□□□□ -2.31
LIN7CQ9NUP9 RNU6-363P-201ENST00000362895 105 ntBASIC0.62□□□□□ -2.31
LIN7CQ9NUP9 Y_RNA.360-201ENST00000365512 102 ntBASIC0.62□□□□□ -2.31
LIN7CQ9NUP9 Y_RNA.362-201ENST00000365518 110 ntBASIC0.62□□□□□ -2.31
LIN7CQ9NUP9 RNU6-945P-201ENST00000383947 107 ntBASIC0.62□□□□□ -2.31
LIN7CQ9NUP9 MIR548A1-201ENST00000385041 97 ntBASIC0.62□□□□□ -2.31
LIN7CQ9NUP9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.62□□□□□ -2.31
LIN7CQ9NUP9 BX276092.1-201ENST00000427368 251 ntBASIC0.62□□□□□ -2.31
LIN7CQ9NUP9 RNA5SP94-201ENST00000516917 108 ntBASIC0.62□□□□□ -2.31
LIN7CQ9NUP9 U6.95-201ENST00000636931 70 ntBASIC0.62□□□□□ -2.31
LIN7CQ9NUP9 SNORD18A-201ENST00000363753 72 ntBASIC0.61□□□□□ -2.31
LIN7CQ9NUP9 Y_RNA.567-201ENST00000384736 106 ntBASIC0.61□□□□□ -2.31
LIN7CQ9NUP9 MIR520E-201ENST00000384867 87 ntBASIC0.61□□□□□ -2.31
LIN7CQ9NUP9 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
LIN7CQ9NUP9 AC018659.1-201ENST00000551083 169 ntBASIC0.61□□□□□ -2.31
LIN7CQ9NUP9 AC007012.1-201ENST00000567192 175 ntBASIC0.61□□□□□ -2.31
LIN7CQ9NUP9 MIR548H5-201ENST00000580314 60 ntBASIC0.61□□□□□ -2.31
LIN7CQ9NUP9 MIR3910-1-201ENST00000580936 111 ntBASIC0.61□□□□□ -2.31
LIN7CQ9NUP9 AC092634.7-201ENST00000621022 103 ntBASIC0.61□□□□□ -2.31
LIN7CQ9NUP9 AL512310.12-203ENST00000640543 90 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms