Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNA5SP133-201ENST00000363368 119 ntBASIC0.57□□□□□ -2.32
SLC6A13Q9NSD5 Y_RNA.280-201ENST00000364765 112 ntBASIC0.57□□□□□ -2.32
SLC6A13Q9NSD5 RNY1P4-201ENST00000384595 115 ntBASIC0.57□□□□□ -2.32
SLC6A13Q9NSD5 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
SLC6A13Q9NSD5 MIR6513-201ENST00000621188 64 ntBASIC0.57□□□□□ -2.32
SLC6A13Q9NSD5 U6.109-201ENST00000636749 87 ntBASIC0.57□□□□□ -2.32
SLC6A13Q9NSD5 RNU4-58P-201ENST00000363192 141 ntBASIC0.56□□□□□ -2.32
SLC6A13Q9NSD5 Y_RNA.174-201ENST00000363781 105 ntBASIC0.56□□□□□ -2.32
SLC6A13Q9NSD5 RNU6-907P-201ENST00000390924 102 ntBASIC0.56□□□□□ -2.32
SLC6A13Q9NSD5 RNU6-426P-201ENST00000516464 97 ntBASIC0.56□□□□□ -2.32
SLC6A13Q9NSD5 Y_RNA.697-201ENST00000516776 113 ntBASIC0.56□□□□□ -2.32
SLC6A13Q9NSD5 IGKV1-22-201ENST00000524313 326 ntBASIC0.56□□□□□ -2.32
SLC6A13Q9NSD5 DEFB131E-201ENST00000532329 154 ntBASIC0.56□□□□□ -2.32
SLC6A13Q9NSD5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
SLC6A13Q9NSD5 Y_RNA.205-201ENST00000364128 113 ntBASIC0.55□□□□□ -2.32
SLC6A13Q9NSD5 RNY1P5-201ENST00000383890 115 ntBASIC0.55□□□□□ -2.32
SLC6A13Q9NSD5 Y_RNA.536-201ENST00000384621 113 ntBASIC0.55□□□□□ -2.32
SLC6A13Q9NSD5 RNU6-1104P-201ENST00000384723 104 ntBASIC0.55□□□□□ -2.32
SLC6A13Q9NSD5 RN7SKP19-201ENST00000516016 252 ntBASIC0.55□□□□□ -2.32
SLC6A13Q9NSD5 RNU6-469P-201ENST00000516253 101 ntBASIC0.55□□□□□ -2.32
SLC6A13Q9NSD5 RNU6-531P-201ENST00000516694 104 ntBASIC0.55□□□□□ -2.32
SLC6A13Q9NSD5 AC138749.4-201ENST00000563970 127 ntBASIC0.55□□□□□ -2.32
SLC6A13Q9NSD5 MIR3678-201ENST00000578455 94 ntBASIC0.55□□□□□ -2.32
SLC6A13Q9NSD5 uc_338.16-201ENST00000621804 95 ntBASIC0.55□□□□□ -2.32
SLC6A13Q9NSD5 Y_RNA.32-201ENST00000362589 110 ntBASIC0.54□□□□□ -2.32
SLC6A13Q9NSD5 Y_RNA.294-201ENST00000364916 102 ntBASIC0.54□□□□□ -2.32
SLC6A13Q9NSD5 RNU6-209P-201ENST00000384118 107 ntBASIC0.54□□□□□ -2.32
SLC6A13Q9NSD5 RNU6-291P-201ENST00000384720 107 ntBASIC0.54□□□□□ -2.32
SLC6A13Q9NSD5 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
SLC6A13Q9NSD5 MIR548I1-201ENST00000408810 149 ntBASIC0.54□□□□□ -2.32
SLC6A13Q9NSD5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.54□□□□□ -2.32
SLC6A13Q9NSD5 RN7SKP12-201ENST00000516275 143 ntBASIC0.54□□□□□ -2.32
SLC6A13Q9NSD5 RNA5SP94-201ENST00000516917 108 ntBASIC0.54□□□□□ -2.32
SLC6A13Q9NSD5 RNU6-255P-201ENST00000516957 105 ntBASIC0.54□□□□□ -2.32
SLC6A13Q9NSD5 MTND5P34-201ENST00000568888 325 ntBASIC0.54□□□□□ -2.32
SLC6A13Q9NSD5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
SLC6A13Q9NSD5 RNA5SP499-201ENST00000363982 119 ntBASIC0.53□□□□□ -2.32
SLC6A13Q9NSD5 RNY1P2-201ENST00000364820 117 ntBASIC0.53□□□□□ -2.32
SLC6A13Q9NSD5 Y_RNA.343-201ENST00000365354 112 ntBASIC0.53□□□□□ -2.32
SLC6A13Q9NSD5 RNU6-535P-201ENST00000384722 107 ntBASIC0.53□□□□□ -2.32
SLC6A13Q9NSD5 MIR206-201ENST00000384872 86 ntBASIC0.53□□□□□ -2.32
SLC6A13Q9NSD5 AL158147.1-201ENST00000443970 75 ntBASIC0.53□□□□□ -2.32
SLC6A13Q9NSD5 RNU6-135P-201ENST00000516769 101 ntBASIC0.53□□□□□ -2.32
SLC6A13Q9NSD5 AC105081.1-201ENST00000617727 106 ntBASIC0.53□□□□□ -2.32
SLC6A13Q9NSD5 AC092634.7-201ENST00000621022 103 ntBASIC0.53□□□□□ -2.32
SLC6A13Q9NSD5 Y_RNA.506-201ENST00000384494 102 ntBASIC0.52□□□□□ -2.33
SLC6A13Q9NSD5 RNU6-1321P-201ENST00000390905 107 ntBASIC0.52□□□□□ -2.33
SLC6A13Q9NSD5 RNU6-679P-201ENST00000391003 106 ntBASIC0.52□□□□□ -2.33
SLC6A13Q9NSD5 MIR936-201ENST00000401264 98 ntBASIC0.52□□□□□ -2.33
SLC6A13Q9NSD5 RNA5SP136-201ENST00000410906 107 ntBASIC0.52□□□□□ -2.33
SLC6A13Q9NSD5 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
SLC6A13Q9NSD5 RNA5SP272-201ENST00000516095 111 ntBASIC0.52□□□□□ -2.33
SLC6A13Q9NSD5 SNORA31.14-201ENST00000516728 116 ntBASIC0.52□□□□□ -2.33
SLC6A13Q9NSD5 TUG1_4.1-201ENST00000619464 181 ntBASIC0.52□□□□□ -2.33
SLC6A13Q9NSD5 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.52□□□□□ -2.33
SLC6A13Q9NSD5 RNA5SP347-201ENST00000362445 119 ntBASIC0.51□□□□□ -2.33
SLC6A13Q9NSD5 Y_RNA.119-201ENST00000363301 96 ntBASIC0.51□□□□□ -2.33
SLC6A13Q9NSD5 RNA5SP325-201ENST00000363756 130 ntBASIC0.51□□□□□ -2.33
SLC6A13Q9NSD5 Y_RNA.213-201ENST00000364178 111 ntBASIC0.51□□□□□ -2.33
SLC6A13Q9NSD5 MIR3163-201ENST00000581592 73 ntBASIC0.51□□□□□ -2.33
SLC6A13Q9NSD5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
SLC6A13Q9NSD5 MIR101-2-201ENST00000362195 79 ntBASIC0.5□□□□□ -2.33
SLC6A13Q9NSD5 SNORD18A-201ENST00000363753 72 ntBASIC0.5□□□□□ -2.33
SLC6A13Q9NSD5 Y_RNA.448-201ENST00000384185 108 ntBASIC0.5□□□□□ -2.33
SLC6A13Q9NSD5 Y_RNA.567-201ENST00000384736 106 ntBASIC0.5□□□□□ -2.33
SLC6A13Q9NSD5 Y_RNA.568-201ENST00000384742 113 ntBASIC0.5□□□□□ -2.33
SLC6A13Q9NSD5 MIR644A-201ENST00000385262 94 ntBASIC0.5□□□□□ -2.33
SLC6A13Q9NSD5 MIRLET7F2-201ENST00000385277 83 ntBASIC0.5□□□□□ -2.33
SLC6A13Q9NSD5 MTND4LP9-201ENST00000427694 174 ntBASIC0.5□□□□□ -2.33
SLC6A13Q9NSD5 RNU7-48P-201ENST00000458875 63 ntBASIC0.5□□□□□ -2.33
SLC6A13Q9NSD5 RNU7-2P-201ENST00000516096 62 ntBASIC0.5□□□□□ -2.33
SLC6A13Q9NSD5 Y_RNA.198-201ENST00000364013 98 ntBASIC0.49□□□□□ -2.33
SLC6A13Q9NSD5 RNA5SP517-201ENST00000364724 117 ntBASIC0.49□□□□□ -2.33
SLC6A13Q9NSD5 RNU6-616P-201ENST00000384353 107 ntBASIC0.49□□□□□ -2.33
SLC6A13Q9NSD5 RNU6-429P-201ENST00000384582 108 ntBASIC0.49□□□□□ -2.33
SLC6A13Q9NSD5 SNORA40-201ENST00000388090 126 ntBASIC0.49□□□□□ -2.33
SLC6A13Q9NSD5 MIR759-201ENST00000390224 91 ntBASIC0.49□□□□□ -2.33
SLC6A13Q9NSD5 MIR1263-201ENST00000408324 86 ntBASIC0.49□□□□□ -2.33
SLC6A13Q9NSD5 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
SLC6A13Q9NSD5 SNORD115-19-201ENST00000363098 82 ntBASIC0.48□□□□□ -2.33
SLC6A13Q9NSD5 SNORD115-18-201ENST00000363293 82 ntBASIC0.48□□□□□ -2.33
SLC6A13Q9NSD5 SNORD115-17-201ENST00000364612 82 ntBASIC0.48□□□□□ -2.33
SLC6A13Q9NSD5 SNORA40.8-201ENST00000411034 126 ntBASIC0.48□□□□□ -2.33
SLC6A13Q9NSD5 RNU6-346P-201ENST00000516288 111 ntBASIC0.48□□□□□ -2.33
SLC6A13Q9NSD5 RNU7-6P-201ENST00000516845 62 ntBASIC0.48□□□□□ -2.33
SLC6A13Q9NSD5 AC087741.2-201ENST00000619415 172 ntBASIC0.48□□□□□ -2.33
SLC6A13Q9NSD5 Y_RNA.98-201ENST00000363109 102 ntBASIC0.47□□□□□ -2.33
SLC6A13Q9NSD5 SNORD114-23-201ENST00000363536 72 ntBASIC0.47□□□□□ -2.33
SLC6A13Q9NSD5 MIR193B-201ENST00000384907 83 ntBASIC0.47□□□□□ -2.33
SLC6A13Q9NSD5 MT-TI-201ENST00000387365 69 ntBASIC0.47□□□□□ -2.33
SLC6A13Q9NSD5 SNORD71-201ENST00000411292 86 ntBASIC0.47□□□□□ -2.33
SLC6A13Q9NSD5 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
SLC6A13Q9NSD5 MIR4711-201ENST00000578274 70 ntBASIC0.47□□□□□ -2.33
SLC6A13Q9NSD5 AC243829.3-201ENST00000622177 108 ntBASIC0.47□□□□□ -2.33
SLC6A13Q9NSD5 AP001362.1-201ENST00000625165 124 ntBASIC0.47□□□□□ -2.33
SLC6A13Q9NSD5 Y_RNA.56-201ENST00000362798 112 ntBASIC0.46□□□□□ -2.34
SLC6A13Q9NSD5 RNU6-1229P-201ENST00000364295 107 ntBASIC0.46□□□□□ -2.34
SLC6A13Q9NSD5 RNU6-865P-201ENST00000364772 107 ntBASIC0.46□□□□□ -2.34
SLC6A13Q9NSD5 SNORD115-35-201ENST00000365122 82 ntBASIC0.46□□□□□ -2.34
SLC6A13Q9NSD5 SNORA8.2-201ENST00000384372 139 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 191.1 ms