Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 Y_RNA.528-201ENST00000384575 108 ntBASIC0.65□□□□□ -2.31
HINT3Q9NQE9 MIR206-201ENST00000384872 86 ntBASIC0.65□□□□□ -2.31
HINT3Q9NQE9 MIR759-201ENST00000390224 91 ntBASIC0.65□□□□□ -2.31
HINT3Q9NQE9 RNU6-971P-201ENST00000516920 106 ntBASIC0.65□□□□□ -2.31
HINT3Q9NQE9 DEFB131E-201ENST00000532329 154 ntBASIC0.65□□□□□ -2.31
HINT3Q9NQE9 AC138749.4-201ENST00000563970 127 ntBASIC0.65□□□□□ -2.31
HINT3Q9NQE9 AC087741.2-201ENST00000619415 172 ntBASIC0.65□□□□□ -2.31
HINT3Q9NQE9 SNORD58C-201ENST00000365223 64 ntBASIC0.64□□□□□ -2.31
HINT3Q9NQE9 RNA5SP117-201ENST00000365294 118 ntBASIC0.64□□□□□ -2.31
HINT3Q9NQE9 RNU6-187P-201ENST00000384139 106 ntBASIC0.64□□□□□ -2.31
HINT3Q9NQE9 MIRLET7F2-201ENST00000385277 83 ntBASIC0.64□□□□□ -2.31
HINT3Q9NQE9 RNU6-1321P-201ENST00000390905 107 ntBASIC0.64□□□□□ -2.31
HINT3Q9NQE9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.64□□□□□ -2.31
HINT3Q9NQE9 AL606490.4-201ENST00000423117 127 ntBASIC0.64□□□□□ -2.31
HINT3Q9NQE9 RNU6-531P-201ENST00000516694 104 ntBASIC0.64□□□□□ -2.31
HINT3Q9NQE9 AC025166.1-201ENST00000612411 163 ntBASIC0.64□□□□□ -2.31
HINT3Q9NQE9 MIR6734-201ENST00000621166 68 ntBASIC0.64□□□□□ -2.31
HINT3Q9NQE9 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
HINT3Q9NQE9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.64□□□□□ -2.31
HINT3Q9NQE9 RNU4-58P-201ENST00000363192 141 ntBASIC0.63□□□□□ -2.31
HINT3Q9NQE9 RNY1P8-201ENST00000383970 114 ntBASIC0.63□□□□□ -2.31
HINT3Q9NQE9 Y_RNA.448-201ENST00000384185 108 ntBASIC0.63□□□□□ -2.31
HINT3Q9NQE9 RNU7-2P-201ENST00000516096 62 ntBASIC0.63□□□□□ -2.31
HINT3Q9NQE9 RNU6-1223P-201ENST00000517124 104 ntBASIC0.63□□□□□ -2.31
HINT3Q9NQE9 Y_RNA.119-201ENST00000363301 96 ntBASIC0.62□□□□□ -2.31
HINT3Q9NQE9 RNU6-704P-201ENST00000364162 103 ntBASIC0.62□□□□□ -2.31
HINT3Q9NQE9 RNY1P2-201ENST00000364820 117 ntBASIC0.62□□□□□ -2.31
HINT3Q9NQE9 Y_RNA.536-201ENST00000384621 113 ntBASIC0.62□□□□□ -2.31
HINT3Q9NQE9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
HINT3Q9NQE9 MIR548M-201ENST00000408260 86 ntBASIC0.62□□□□□ -2.31
HINT3Q9NQE9 RNU6-735P-201ENST00000410612 107 ntBASIC0.62□□□□□ -2.31
HINT3Q9NQE9 RNU6-772P-201ENST00000516042 105 ntBASIC0.62□□□□□ -2.31
HINT3Q9NQE9 RNU6-1194P-201ENST00000516208 104 ntBASIC0.62□□□□□ -2.31
HINT3Q9NQE9 Y_RNA.697-201ENST00000516776 113 ntBASIC0.62□□□□□ -2.31
HINT3Q9NQE9 RNU6-1234P-201ENST00000516877 103 ntBASIC0.62□□□□□ -2.31
HINT3Q9NQE9 AC138907.6-201ENST00000568401 126 ntBASIC0.62□□□□□ -2.31
HINT3Q9NQE9 MTND5P34-201ENST00000568888 325 ntBASIC0.62□□□□□ -2.31
HINT3Q9NQE9 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
HINT3Q9NQE9 SNORD115-19-201ENST00000363098 82 ntBASIC0.61□□□□□ -2.31
HINT3Q9NQE9 SNORD115-18-201ENST00000363293 82 ntBASIC0.61□□□□□ -2.31
HINT3Q9NQE9 SNORD115-17-201ENST00000364612 82 ntBASIC0.61□□□□□ -2.31
HINT3Q9NQE9 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
HINT3Q9NQE9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.61□□□□□ -2.31
HINT3Q9NQE9 RNU7-48P-201ENST00000458875 63 ntBASIC0.61□□□□□ -2.31
HINT3Q9NQE9 Y_RNA.773-201ENST00000607168 90 ntBASIC0.61□□□□□ -2.31
HINT3Q9NQE9 MTND5P18-201ENST00000445624 1801 ntBASIC0.61□□□□□ -2.31
HINT3Q9NQE9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
HINT3Q9NQE9 SNORD115-35-201ENST00000365122 82 ntBASIC0.6□□□□□ -2.31
HINT3Q9NQE9 RNU6-291P-201ENST00000384720 107 ntBASIC0.6□□□□□ -2.31
HINT3Q9NQE9 RNU6-535P-201ENST00000384722 107 ntBASIC0.6□□□□□ -2.31
HINT3Q9NQE9 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
HINT3Q9NQE9 RNU6-1307P-201ENST00000391012 103 ntBASIC0.6□□□□□ -2.31
HINT3Q9NQE9 RNU7-107P-201ENST00000459121 61 ntBASIC0.6□□□□□ -2.31
HINT3Q9NQE9 MIR5000-201ENST00000577717 103 ntBASIC0.6□□□□□ -2.31
HINT3Q9NQE9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.6□□□□□ -2.31
HINT3Q9NQE9 uc_338.16-201ENST00000621804 95 ntBASIC0.6□□□□□ -2.31
HINT3Q9NQE9 Y_RNA.32-201ENST00000362589 110 ntBASIC0.59□□□□□ -2.31
HINT3Q9NQE9 Y_RNA.98-201ENST00000363109 102 ntBASIC0.59□□□□□ -2.31
HINT3Q9NQE9 Y_RNA.174-201ENST00000363781 105 ntBASIC0.59□□□□□ -2.31
HINT3Q9NQE9 Y_RNA.355-201ENST00000365462 98 ntBASIC0.59□□□□□ -2.31
HINT3Q9NQE9 RNU6-80P-201ENST00000384195 107 ntBASIC0.59□□□□□ -2.31
HINT3Q9NQE9 Y_RNA.508-201ENST00000384502 114 ntBASIC0.59□□□□□ -2.31
HINT3Q9NQE9 Y_RNA.630-201ENST00000411370 108 ntBASIC0.59□□□□□ -2.31
HINT3Q9NQE9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.59□□□□□ -2.31
HINT3Q9NQE9 MIR3678-201ENST00000578455 94 ntBASIC0.59□□□□□ -2.31
HINT3Q9NQE9 AL157777.2-201ENST00000258070 137 ntBASIC0.58□□□□□ -2.32
HINT3Q9NQE9 RNU6-865P-201ENST00000364772 107 ntBASIC0.58□□□□□ -2.32
HINT3Q9NQE9 Y_RNA.328-201ENST00000365208 113 ntBASIC0.58□□□□□ -2.32
HINT3Q9NQE9 Y_RNA.346-201ENST00000365385 112 ntBASIC0.58□□□□□ -2.32
HINT3Q9NQE9 RNU6-429P-201ENST00000384582 108 ntBASIC0.58□□□□□ -2.32
HINT3Q9NQE9 MIR548D2-201ENST00000384955 97 ntBASIC0.58□□□□□ -2.32
HINT3Q9NQE9 RNU6-679P-201ENST00000391003 106 ntBASIC0.58□□□□□ -2.32
HINT3Q9NQE9 SNORA31.14-201ENST00000516728 116 ntBASIC0.58□□□□□ -2.32
HINT3Q9NQE9 AP001362.1-201ENST00000625165 124 ntBASIC0.58□□□□□ -2.32
HINT3Q9NQE9 MIR101-2-201ENST00000362195 79 ntBASIC0.57□□□□□ -2.32
HINT3Q9NQE9 RNY4P6-201ENST00000363667 96 ntBASIC0.57□□□□□ -2.32
HINT3Q9NQE9 Y_RNA.218-201ENST00000364218 104 ntBASIC0.57□□□□□ -2.32
HINT3Q9NQE9 Y_RNA.525-201ENST00000384570 113 ntBASIC0.57□□□□□ -2.32
HINT3Q9NQE9 MIR644A-201ENST00000385262 94 ntBASIC0.57□□□□□ -2.32
HINT3Q9NQE9 snoU13.18-201ENST00000459483 104 ntBASIC0.57□□□□□ -2.32
HINT3Q9NQE9 RNU6-469P-201ENST00000516253 101 ntBASIC0.57□□□□□ -2.32
HINT3Q9NQE9 RNU6-521P-201ENST00000516663 105 ntBASIC0.57□□□□□ -2.32
HINT3Q9NQE9 MIR1255B1-201ENST00000636325 63 ntBASIC0.57□□□□□ -2.32
HINT3Q9NQE9 Y_RNA.71-201ENST00000362892 104 ntBASIC0.56□□□□□ -2.32
HINT3Q9NQE9 Y_RNA.127-201ENST00000363386 109 ntBASIC0.56□□□□□ -2.32
HINT3Q9NQE9 RNU6-945P-201ENST00000383947 107 ntBASIC0.56□□□□□ -2.32
HINT3Q9NQE9 RNA5SP94-201ENST00000516917 108 ntBASIC0.56□□□□□ -2.32
HINT3Q9NQE9 Y_RNA.712-201ENST00000517011 92 ntBASIC0.56□□□□□ -2.32
HINT3Q9NQE9 MIR4500-201ENST00000579472 76 ntBASIC0.56□□□□□ -2.32
HINT3Q9NQE9 MIR4714-201ENST00000580728 77 ntBASIC0.56□□□□□ -2.32
HINT3Q9NQE9 MIR376B-201ENST00000614515 100 ntBASIC0.56□□□□□ -2.32
HINT3Q9NQE9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
HINT3Q9NQE9 Y_RNA.56-201ENST00000362798 112 ntBASIC0.55□□□□□ -2.32
HINT3Q9NQE9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.55□□□□□ -2.32
HINT3Q9NQE9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.55□□□□□ -2.32
HINT3Q9NQE9 RNU6-733P-201ENST00000410759 104 ntBASIC0.55□□□□□ -2.32
HINT3Q9NQE9 AC018659.1-201ENST00000551083 169 ntBASIC0.55□□□□□ -2.32
HINT3Q9NQE9 AC022709.1-201ENST00000615967 87 ntBASIC0.55□□□□□ -2.32
HINT3Q9NQE9 Y_RNA.344-201ENST00000365381 112 ntBASIC0.54□□□□□ -2.32
HINT3Q9NQE9 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms