Protein–RNA interactions for Protein: Q9NPG4

PCDH12, Protocadherin-12, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12Q9NPG4 AL359881.1-201ENST00000602916 267 ntBASIC0.78□□□□□ -2.28
PCDH12Q9NPG4 AC022709.1-201ENST00000615967 87 ntBASIC0.78□□□□□ -2.28
PCDH12Q9NPG4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.78□□□□□ -2.28
PCDH12Q9NPG4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.77□□□□□ -2.29
PCDH12Q9NPG4 Y_RNA.506-201ENST00000384494 102 ntBASIC0.77□□□□□ -2.29
PCDH12Q9NPG4 RNU6-535P-201ENST00000384722 107 ntBASIC0.77□□□□□ -2.29
PCDH12Q9NPG4 RNU6-1104P-201ENST00000384723 104 ntBASIC0.77□□□□□ -2.29
PCDH12Q9NPG4 Y_RNA.617-201ENST00000410920 90 ntBASIC0.77□□□□□ -2.29
PCDH12Q9NPG4 RNU4-54P-201ENST00000516428 129 ntBASIC0.77□□□□□ -2.29
PCDH12Q9NPG4 RNU6-531P-201ENST00000516694 104 ntBASIC0.77□□□□□ -2.29
PCDH12Q9NPG4 RNU7-6P-201ENST00000516845 62 ntBASIC0.77□□□□□ -2.29
PCDH12Q9NPG4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.77□□□□□ -2.29
PCDH12Q9NPG4 AC105081.1-201ENST00000617727 106 ntBASIC0.77□□□□□ -2.29
PCDH12Q9NPG4 Y_RNA.98-201ENST00000363109 102 ntBASIC0.76□□□□□ -2.29
PCDH12Q9NPG4 Y_RNA.294-201ENST00000364916 102 ntBASIC0.76□□□□□ -2.29
PCDH12Q9NPG4 MIR598-201ENST00000384868 97 ntBASIC0.76□□□□□ -2.29
PCDH12Q9NPG4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
PCDH12Q9NPG4 MTND4LP9-201ENST00000427694 174 ntBASIC0.76□□□□□ -2.29
PCDH12Q9NPG4 RNA5SP272-201ENST00000516095 111 ntBASIC0.76□□□□□ -2.29
PCDH12Q9NPG4 AC138749.4-201ENST00000563970 127 ntBASIC0.76□□□□□ -2.29
PCDH12Q9NPG4 MIR3678-201ENST00000578455 94 ntBASIC0.76□□□□□ -2.29
PCDH12Q9NPG4 AC092634.7-201ENST00000621022 103 ntBASIC0.76□□□□□ -2.29
PCDH12Q9NPG4 Y_RNA.119-201ENST00000363301 96 ntBASIC0.75□□□□□ -2.29
PCDH12Q9NPG4 RNU6-945P-201ENST00000383947 107 ntBASIC0.75□□□□□ -2.29
PCDH12Q9NPG4 MIR206-201ENST00000384872 86 ntBASIC0.75□□□□□ -2.29
PCDH12Q9NPG4 MIRLET7F2-201ENST00000385277 83 ntBASIC0.75□□□□□ -2.29
PCDH12Q9NPG4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
PCDH12Q9NPG4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
PCDH12Q9NPG4 RNU6-679P-201ENST00000391003 106 ntBASIC0.75□□□□□ -2.29
PCDH12Q9NPG4 RNU7-2P-201ENST00000516096 62 ntBASIC0.75□□□□□ -2.29
PCDH12Q9NPG4 IGKV1-22-201ENST00000524313 326 ntBASIC0.75□□□□□ -2.29
PCDH12Q9NPG4 MIR5000-201ENST00000577717 103 ntBASIC0.75□□□□□ -2.29
PCDH12Q9NPG4 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
PCDH12Q9NPG4 RNU7-48P-201ENST00000458875 63 ntBASIC0.74□□□□□ -2.29
PCDH12Q9NPG4 MIR1270-201ENST00000459320 83 ntBASIC0.74□□□□□ -2.29
PCDH12Q9NPG4 RN7SKP12-201ENST00000516275 143 ntBASIC0.74□□□□□ -2.29
PCDH12Q9NPG4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
PCDH12Q9NPG4 RNU6-865P-201ENST00000364772 107 ntBASIC0.73□□□□□ -2.29
PCDH12Q9NPG4 Y_RNA.448-201ENST00000384185 108 ntBASIC0.73□□□□□ -2.29
PCDH12Q9NPG4 RNU6-429P-201ENST00000384582 108 ntBASIC0.73□□□□□ -2.29
PCDH12Q9NPG4 RNU6-346P-201ENST00000516288 111 ntBASIC0.73□□□□□ -2.29
PCDH12Q9NPG4 RNU7-10P-201ENST00000607194 63 ntBASIC0.73□□□□□ -2.29
PCDH12Q9NPG4 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
PCDH12Q9NPG4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.73□□□□□ -2.29
PCDH12Q9NPG4 RNY1P8-201ENST00000383970 114 ntBASIC0.72□□□□□ -2.29
PCDH12Q9NPG4 Y_RNA.528-201ENST00000384575 108 ntBASIC0.72□□□□□ -2.29
PCDH12Q9NPG4 RNU6-291P-201ENST00000384720 107 ntBASIC0.72□□□□□ -2.29
PCDH12Q9NPG4 RNU6-1321P-201ENST00000390905 107 ntBASIC0.72□□□□□ -2.29
PCDH12Q9NPG4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.72□□□□□ -2.29
PCDH12Q9NPG4 RNU6-257P-201ENST00000410238 98 ntBASIC0.72□□□□□ -2.29
PCDH12Q9NPG4 SNORD71-201ENST00000411292 86 ntBASIC0.72□□□□□ -2.29
PCDH12Q9NPG4 RNU6-1061P-201ENST00000516530 99 ntBASIC0.72□□□□□ -2.29
PCDH12Q9NPG4 Y_RNA.703-201ENST00000516846 111 ntBASIC0.72□□□□□ -2.29
PCDH12Q9NPG4 MTND5P34-201ENST00000568888 325 ntBASIC0.72□□□□□ -2.29
PCDH12Q9NPG4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.72□□□□□ -2.29
PCDH12Q9NPG4 RNU6-1229P-201ENST00000364295 107 ntBASIC0.71□□□□□ -2.3
PCDH12Q9NPG4 SNORD115-35-201ENST00000365122 82 ntBASIC0.71□□□□□ -2.3
PCDH12Q9NPG4 RNU6-1062P-201ENST00000383908 107 ntBASIC0.71□□□□□ -2.3
PCDH12Q9NPG4 RNU6-616P-201ENST00000384353 107 ntBASIC0.71□□□□□ -2.3
PCDH12Q9NPG4 RNU6-733P-201ENST00000410759 104 ntBASIC0.71□□□□□ -2.3
PCDH12Q9NPG4 SNORA31.14-201ENST00000516728 116 ntBASIC0.71□□□□□ -2.3
PCDH12Q9NPG4 RNA5SP94-201ENST00000516917 108 ntBASIC0.71□□□□□ -2.3
PCDH12Q9NPG4 AP001362.1-201ENST00000625165 124 ntBASIC0.71□□□□□ -2.3
PCDH12Q9NPG4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
PCDH12Q9NPG4 Y_RNA.56-201ENST00000362798 112 ntBASIC0.7□□□□□ -2.3
PCDH12Q9NPG4 SNORD115-19-201ENST00000363098 82 ntBASIC0.7□□□□□ -2.3
PCDH12Q9NPG4 SNORD115-18-201ENST00000363293 82 ntBASIC0.7□□□□□ -2.3
PCDH12Q9NPG4 SNORD115-17-201ENST00000364612 82 ntBASIC0.7□□□□□ -2.3
PCDH12Q9NPG4 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
PCDH12Q9NPG4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.7□□□□□ -2.3
PCDH12Q9NPG4 RNA5SP480-201ENST00000516840 109 ntBASIC0.7□□□□□ -2.3
PCDH12Q9NPG4 AC138907.6-201ENST00000568401 126 ntBASIC0.7□□□□□ -2.3
PCDH12Q9NPG4 MIR548H5-201ENST00000580314 60 ntBASIC0.7□□□□□ -2.3
PCDH12Q9NPG4 MIR4714-201ENST00000580728 77 ntBASIC0.7□□□□□ -2.3
PCDH12Q9NPG4 Y_RNA.32-201ENST00000362589 110 ntBASIC0.69□□□□□ -2.3
PCDH12Q9NPG4 Y_RNA.36-201ENST00000362602 112 ntBASIC0.69□□□□□ -2.3
PCDH12Q9NPG4 RNU6-235P-201ENST00000362644 107 ntBASIC0.69□□□□□ -2.3
PCDH12Q9NPG4 Y_RNA.328-201ENST00000365208 113 ntBASIC0.69□□□□□ -2.3
PCDH12Q9NPG4 Y_RNA.346-201ENST00000365385 112 ntBASIC0.69□□□□□ -2.3
PCDH12Q9NPG4 Y_RNA.567-201ENST00000384736 106 ntBASIC0.69□□□□□ -2.3
PCDH12Q9NPG4 RNU6-1211P-201ENST00000459179 105 ntBASIC0.69□□□□□ -2.3
PCDH12Q9NPG4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.69□□□□□ -2.3
PCDH12Q9NPG4 MIR644A-201ENST00000385262 94 ntBASIC0.68□□□□□ -2.3
PCDH12Q9NPG4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.68□□□□□ -2.3
PCDH12Q9NPG4 AC025166.1-201ENST00000612411 163 ntBASIC0.68□□□□□ -2.3
PCDH12Q9NPG4 AC087741.2-201ENST00000619415 172 ntBASIC0.68□□□□□ -2.3
PCDH12Q9NPG4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.68□□□□□ -2.3
PCDH12Q9NPG4 RNY4P6-201ENST00000363667 96 ntBASIC0.67□□□□□ -2.3
PCDH12Q9NPG4 SNORA40.8-201ENST00000411034 126 ntBASIC0.67□□□□□ -2.3
PCDH12Q9NPG4 RNU6-781P-201ENST00000516377 101 ntBASIC0.67□□□□□ -2.3
PCDH12Q9NPG4 MIR4500-201ENST00000579472 76 ntBASIC0.67□□□□□ -2.3
PCDH12Q9NPG4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
PCDH12Q9NPG4 SNORD58C-201ENST00000365223 64 ntBASIC0.66□□□□□ -2.3
PCDH12Q9NPG4 SNORD50.2-201ENST00000365465 70 ntBASIC0.66□□□□□ -2.3
PCDH12Q9NPG4 RNU6-746P-201ENST00000384112 109 ntBASIC0.66□□□□□ -2.3
PCDH12Q9NPG4 MT-TR-201ENST00000387439 65 ntBASIC0.66□□□□□ -2.3
PCDH12Q9NPG4 AC138869.1-201ENST00000568623 124 ntBASIC0.66□□□□□ -2.3
PCDH12Q9NPG4 SNORD114-26-201ENST00000363543 72 ntBASIC0.65□□□□□ -2.31
PCDH12Q9NPG4 SNORD18A-201ENST00000363753 72 ntBASIC0.65□□□□□ -2.31
PCDH12Q9NPG4 SNORD38.2-201ENST00000384470 69 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 228.5 ms