Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AC021443.1-201ENST00000604478 211 ntBASIC-0.26□□□□□ -2.45
EXOSC4Q9NPD3 AL670379.3-201ENST00000605040 251 ntBASIC-0.26□□□□□ -2.45
EXOSC4Q9NPD3 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.27□□□□□ -2.45
EXOSC4Q9NPD3 RNU6-508P-201ENST00000363231 103 ntBASIC-0.27□□□□□ -2.45
EXOSC4Q9NPD3 MIR599-201ENST00000385069 95 ntBASIC-0.27□□□□□ -2.45
EXOSC4Q9NPD3 SNORD41.1-201ENST00000391000 69 ntBASIC-0.27□□□□□ -2.45
EXOSC4Q9NPD3 RNU7-164P-201ENST00000459221 62 ntBASIC-0.27□□□□□ -2.45
EXOSC4Q9NPD3 AC138907.4-201ENST00000570107 226 ntBASIC-0.27□□□□□ -2.45
EXOSC4Q9NPD3 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 SNORD114-12-201ENST00000365400 75 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 RNU6-449P-201ENST00000383914 107 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 MIR206-201ENST00000384872 86 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 SNORD110-201ENST00000408189 75 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 HMGN2P22-201ENST00000427588 175 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 RNU6-180P-201ENST00000516697 61 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 NAMPTP3-201ENST00000569273 224 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 AC008737.2-201ENST00000599446 118 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 AC009779.6-201ENST00000603972 165 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 U7.6-201ENST00000610841 64 ntBASIC-0.28□□□□□ -2.45
EXOSC4Q9NPD3 RNU6-865P-201ENST00000364772 107 ntBASIC-0.29□□□□□ -2.46
EXOSC4Q9NPD3 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.29□□□□□ -2.46
EXOSC4Q9NPD3 RNU6-302P-201ENST00000365249 107 ntBASIC-0.29□□□□□ -2.46
EXOSC4Q9NPD3 RNU6V-201ENST00000384105 107 ntBASIC-0.29□□□□□ -2.46
EXOSC4Q9NPD3 MIR548H3-201ENST00000408771 118 ntBASIC-0.29□□□□□ -2.46
EXOSC4Q9NPD3 RNU4-69P-201ENST00000410677 143 ntBASIC-0.29□□□□□ -2.46
EXOSC4Q9NPD3 RNA5SP484-201ENST00000458857 111 ntBASIC-0.29□□□□□ -2.46
EXOSC4Q9NPD3 RNU7-123P-201ENST00000515911 60 ntBASIC-0.29□□□□□ -2.46
EXOSC4Q9NPD3 RNA5SP330-201ENST00000517096 96 ntBASIC-0.29□□□□□ -2.46
EXOSC4Q9NPD3 RNU7-10P-201ENST00000607194 63 ntBASIC-0.29□□□□□ -2.46
EXOSC4Q9NPD3 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.3□□□□□ -2.46
EXOSC4Q9NPD3 RNU6-818P-201ENST00000364837 108 ntBASIC-0.3□□□□□ -2.46
EXOSC4Q9NPD3 MIR606-201ENST00000384851 96 ntBASIC-0.3□□□□□ -2.46
EXOSC4Q9NPD3 AC006210.1-201ENST00000424882 111 ntBASIC-0.3□□□□□ -2.46
EXOSC4Q9NPD3 RNU7-48P-201ENST00000458875 63 ntBASIC-0.3□□□□□ -2.46
EXOSC4Q9NPD3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.3□□□□□ -2.46
EXOSC4Q9NPD3 AL117187.1-201ENST00000555482 181 ntBASIC-0.3□□□□□ -2.46
EXOSC4Q9NPD3 MIR6514-201ENST00000622549 70 ntBASIC-0.3□□□□□ -2.46
EXOSC4Q9NPD3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.3□□□□□ -2.46
EXOSC4Q9NPD3 AC073869.9-201ENST00000641610 120 ntBASIC-0.3□□□□□ -2.46
EXOSC4Q9NPD3 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.31□□□□□ -2.46
EXOSC4Q9NPD3 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.31□□□□□ -2.46
EXOSC4Q9NPD3 RNU6-588P-201ENST00000410281 105 ntBASIC-0.31□□□□□ -2.46
EXOSC4Q9NPD3 RNU7-195P-201ENST00000458793 62 ntBASIC-0.31□□□□□ -2.46
EXOSC4Q9NPD3 AC011603.4-201ENST00000611325 277 ntBASIC-0.31□□□□□ -2.46
EXOSC4Q9NPD3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.31□□□□□ -2.46
EXOSC4Q9NPD3 AC084368.1-201ENST00000620935 65 ntBASIC-0.31□□□□□ -2.46
EXOSC4Q9NPD3 MIR1295B-201ENST00000636144 60 ntBASIC-0.31□□□□□ -2.46
EXOSC4Q9NPD3 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.32□□□□□ -2.46
EXOSC4Q9NPD3 RNY1P11-201ENST00000363759 113 ntBASIC-0.32□□□□□ -2.46
EXOSC4Q9NPD3 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.32□□□□□ -2.46
EXOSC4Q9NPD3 RNU6-918P-201ENST00000391219 106 ntBASIC-0.32□□□□□ -2.46
EXOSC4Q9NPD3 AC104692.1-201ENST00000472406 90 ntBASIC-0.32□□□□□ -2.46
EXOSC4Q9NPD3 MIR3920-201ENST00000581751 86 ntBASIC-0.32□□□□□ -2.46
EXOSC4Q9NPD3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.33□□□□□ -2.46
EXOSC4Q9NPD3 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.33□□□□□ -2.46
EXOSC4Q9NPD3 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.33□□□□□ -2.46
EXOSC4Q9NPD3 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.33□□□□□ -2.46
EXOSC4Q9NPD3 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.33□□□□□ -2.46
EXOSC4Q9NPD3 SNORD63B-201ENST00000411005 70 ntBASIC-0.33□□□□□ -2.46
EXOSC4Q9NPD3 AC097635.1-201ENST00000450678 155 ntBASIC-0.33□□□□□ -2.46
EXOSC4Q9NPD3 SNORD4A-201ENST00000459174 72 ntBASIC-0.33□□□□□ -2.46
EXOSC4Q9NPD3 MIR6844-201ENST00000637122 62 ntBASIC-0.33□□□□□ -2.46
EXOSC4Q9NPD3 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 RNU6-309P-201ENST00000364573 106 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 RNU6-47P-201ENST00000383866 107 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 RNU6-616P-201ENST00000384353 107 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 MIR516B1-201ENST00000385211 90 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 SNORA75.1-201ENST00000391130 148 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 SNORD58.1-201ENST00000391313 66 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 MTATP6P21-201ENST00000440681 189 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 RNU7-106P-201ENST00000459514 67 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 MIR3128-201ENST00000581957 66 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 MIR3149-201ENST00000584629 83 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 MIR2909-201ENST00000617113 69 ntBASIC-0.34□□□□□ -2.46
EXOSC4Q9NPD3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.35□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.35□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.35□□□□□ -2.47
EXOSC4Q9NPD3 SNORA18.1-201ENST00000363418 128 ntBASIC-0.35□□□□□ -2.47
EXOSC4Q9NPD3 RNU6-509P-201ENST00000363519 107 ntBASIC-0.35□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.35□□□□□ -2.47
EXOSC4Q9NPD3 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.35□□□□□ -2.47
EXOSC4Q9NPD3 RNU6-524P-201ENST00000384270 107 ntBASIC-0.35□□□□□ -2.47
EXOSC4Q9NPD3 SNORD77B-201ENST00000391112 67 ntBASIC-0.35□□□□□ -2.47
EXOSC4Q9NPD3 RNU7-2P-201ENST00000516096 62 ntBASIC-0.35□□□□□ -2.47
EXOSC4Q9NPD3 RNU7-13P-201ENST00000516413 62 ntBASIC-0.35□□□□□ -2.47
EXOSC4Q9NPD3 MIR376B-201ENST00000614515 100 ntBASIC-0.35□□□□□ -2.47
EXOSC4Q9NPD3 AP001362.1-201ENST00000625165 124 ntBASIC-0.35□□□□□ -2.47
EXOSC4Q9NPD3 MIR568-201ENST00000385036 95 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms