Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 Y_RNA.13-201ENST00000362403 112 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 SNORD114-22-201ENST00000365423 72 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 MIR548D2-201ENST00000384955 97 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 MIR573-201ENST00000384964 99 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 RNU6-1321P-201ENST00000390905 107 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 AC244098.3-201ENST00000424803 96 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 RNU6-1333P-201ENST00000516162 93 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 ACA64.5-201ENST00000516207 127 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 AC138749.4-201ENST00000563970 127 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 AC133485.1-201ENST00000567176 124 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 AC090897.1-201ENST00000580909 226 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 MIR6082-201ENST00000613604 109 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 RNA5SP133-201ENST00000363368 119 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 SNORA72.6-201ENST00000384520 129 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 RNU7-2P-201ENST00000516096 62 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 SNORA25.16-201ENST00000516741 121 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 RNU6-765P-201ENST00000516916 99 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 CYP3A137P-201ENST00000562436 69 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 MIR4452-201ENST00000583004 71 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 Y_RNA.773-201ENST00000607168 90 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 U6.109-201ENST00000636749 87 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 U6.95-201ENST00000636931 70 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
SIX2Q9NPC8 RNY4P6-201ENST00000363667 96 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 Y_RNA.224-201ENST00000364308 111 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 RNY1P2-201ENST00000364820 117 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 SNORD115-35-201ENST00000365122 82 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 Y_RNA.448-201ENST00000384185 108 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 RNU6-1307P-201ENST00000391012 103 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 AC008267.6-201ENST00000441664 139 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 SNORD33.1-201ENST00000516213 88 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 AC011195.1-201ENST00000578177 177 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 Y_RNA.116-201ENST00000363292 103 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 SNORD113-1-201ENST00000365321 69 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 Y_RNA.344-201ENST00000365381 112 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 MIR518E-201ENST00000385252 88 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 RNU7-48P-201ENST00000458875 63 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 RNU6-1194P-201ENST00000516208 104 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 RNU6-448P-201ENST00000517052 107 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 AP003327.1-201ENST00000529684 127 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.66□□□□□ -2.3
SIX2Q9NPC8 MIR1255B1-201ENST00000636325 63 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 RNU4-58P-201ENST00000363192 141 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.261-201ENST00000364631 102 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 RNU6-22P-201ENST00000384355 107 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 RNU6-1117P-201ENST00000384525 104 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.563-201ENST00000384707 108 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 SNORD100-201ENST00000408573 76 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 RNU4-61P-201ENST00000411243 107 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 RNU6-531P-201ENST00000516694 104 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 MIR4653-201ENST00000585107 83 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 AL365222.1-201ENST00000614661 98 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.119-201ENST00000363301 96 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.328-201ENST00000365208 113 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.353-201ENST00000365440 108 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.362-201ENST00000365518 110 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.649-201ENST00000459077 103 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 AC002350.1-201ENST00000490759 375 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 PSMC1P5-201ENST00000512850 177 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 RNU6-521P-201ENST00000516663 105 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 DEFB131E-201ENST00000532329 154 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 MIR3612-201ENST00000579753 87 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.98-201ENST00000363109 102 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 RNU6-865P-201ENST00000364772 107 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
SIX2Q9NPC8 RPS29P1-201ENST00000465274 159 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 RNU6-406P-201ENST00000516470 107 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 RNU6-789P-201ENST00000517105 102 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 MTND5P34-201ENST00000568888 325 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 AL670379.3-201ENST00000605040 251 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 MIR376B-201ENST00000614515 100 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 AP001362.1-201ENST00000625165 124 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 RNU6-363P-201ENST00000362895 105 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 RNU4-67P-201ENST00000364569 141 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 MIR548A3-201ENST00000385297 97 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 RNU6-1168P-201ENST00000390831 104 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 RNU6-62P-201ENST00000516526 102 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.697-201ENST00000516776 113 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.62□□□□□ -2.31
SIX2Q9NPC8 AC007012.1-201ENST00000567192 175 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 MIR4679-2-201ENST00000578358 77 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 MIR4714-201ENST00000580728 77 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 AL035470.1-201ENST00000622571 220 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 HSBP1P2-201ENST00000299671 229 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 MIR18A-201ENST00000362310 71 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.508-201ENST00000384502 114 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 RNU6-110P-201ENST00000384508 104 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 RNU6-429P-201ENST00000384582 108 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.536-201ENST00000384621 113 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 RNU6-291P-201ENST00000384720 107 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 MIR34C-201ENST00000384831 77 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 MIR548A1-201ENST00000385041 97 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 RNA5SP222-201ENST00000411039 105 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 AL606490.4-201ENST00000423117 127 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 AC138907.6-201ENST00000568401 126 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms