Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 Y_RNA.13-201ENST00000362403 112 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 SNORD114-22-201ENST00000365423 72 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 MIR548D2-201ENST00000384955 97 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 MIR573-201ENST00000384964 99 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 RNU6-1321P-201ENST00000390905 107 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 AC244098.3-201ENST00000424803 96 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 RNU6-1333P-201ENST00000516162 93 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 ACA64.5-201ENST00000516207 127 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 AC138749.4-201ENST00000563970 127 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 AC133485.1-201ENST00000567176 124 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 AC090897.1-201ENST00000580909 226 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 MIR6082-201ENST00000613604 109 ntBASIC0.69□□□□□ -2.3
SIX2Q9NPC8 RNA5SP133-201ENST00000363368 119 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 SNORA72.6-201ENST00000384520 129 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 RNU7-2P-201ENST00000516096 62 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 SNORA25.16-201ENST00000516741 121 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 RNU6-765P-201ENST00000516916 99 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 CYP3A137P-201ENST00000562436 69 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 MIR4452-201ENST00000583004 71 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 Y_RNA.773-201ENST00000607168 90 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 U6.109-201ENST00000636749 87 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 U6.95-201ENST00000636931 70 ntBASIC0.68□□□□□ -2.3
SIX2Q9NPC8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
SIX2Q9NPC8 RNY4P6-201ENST00000363667 96 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 Y_RNA.224-201ENST00000364308 111 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 RNY1P2-201ENST00000364820 117 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 SNORD115-35-201ENST00000365122 82 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 Y_RNA.448-201ENST00000384185 108 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 RNU6-1307P-201ENST00000391012 103 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 AC008267.6-201ENST00000441664 139 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 SNORD33.1-201ENST00000516213 88 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 AC011195.1-201ENST00000578177 177 ntBASIC0.67□□□□□ -2.3
SIX2Q9NPC8 Y_RNA.116-201ENST00000363292 103 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 SNORD113-1-201ENST00000365321 69 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 Y_RNA.344-201ENST00000365381 112 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 MIR518E-201ENST00000385252 88 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 RNU7-48P-201ENST00000458875 63 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 RNU6-1194P-201ENST00000516208 104 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 RNU6-448P-201ENST00000517052 107 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 AP003327.1-201ENST00000529684 127 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.66□□□□□ -2.3
SIX2Q9NPC8 MIR1255B1-201ENST00000636325 63 ntBASIC0.66□□□□□ -2.3
SIX2Q9NPC8 RNU4-58P-201ENST00000363192 141 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.261-201ENST00000364631 102 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 RNU6-22P-201ENST00000384355 107 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 RNU6-1117P-201ENST00000384525 104 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.563-201ENST00000384707 108 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 SNORD100-201ENST00000408573 76 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 RNU4-61P-201ENST00000411243 107 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 RNU6-531P-201ENST00000516694 104 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 MIR4653-201ENST00000585107 83 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 AL365222.1-201ENST00000614661 98 ntBASIC0.65□□□□□ -2.31
SIX2Q9NPC8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.119-201ENST00000363301 96 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.328-201ENST00000365208 113 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.353-201ENST00000365440 108 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.362-201ENST00000365518 110 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.649-201ENST00000459077 103 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 AC002350.1-201ENST00000490759 375 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 PSMC1P5-201ENST00000512850 177 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 RNU6-521P-201ENST00000516663 105 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 DEFB131E-201ENST00000532329 154 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 MIR3612-201ENST00000579753 87 ntBASIC0.64□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.98-201ENST00000363109 102 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 RNU6-865P-201ENST00000364772 107 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
SIX2Q9NPC8 RPS29P1-201ENST00000465274 159 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 RNU6-406P-201ENST00000516470 107 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 RNU6-789P-201ENST00000517105 102 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 MTND5P34-201ENST00000568888 325 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 AL670379.3-201ENST00000605040 251 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 MIR376B-201ENST00000614515 100 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 AP001362.1-201ENST00000625165 124 ntBASIC0.63□□□□□ -2.31
SIX2Q9NPC8 RNU6-363P-201ENST00000362895 105 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 RNU4-67P-201ENST00000364569 141 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 MIR548A3-201ENST00000385297 97 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 RNU6-1168P-201ENST00000390831 104 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 RNU6-62P-201ENST00000516526 102 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.697-201ENST00000516776 113 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.62□□□□□ -2.31
SIX2Q9NPC8 AC007012.1-201ENST00000567192 175 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 MIR4679-2-201ENST00000578358 77 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 MIR4714-201ENST00000580728 77 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 AL035470.1-201ENST00000622571 220 ntBASIC0.62□□□□□ -2.31
SIX2Q9NPC8 HSBP1P2-201ENST00000299671 229 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 MIR18A-201ENST00000362310 71 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.508-201ENST00000384502 114 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 RNU6-110P-201ENST00000384508 104 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 RNU6-429P-201ENST00000384582 108 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 Y_RNA.536-201ENST00000384621 113 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 RNU6-291P-201ENST00000384720 107 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 MIR34C-201ENST00000384831 77 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 MIR548A1-201ENST00000385041 97 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 RNA5SP222-201ENST00000411039 105 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 AL606490.4-201ENST00000423117 127 ntBASIC0.61□□□□□ -2.31
SIX2Q9NPC8 AC138907.6-201ENST00000568401 126 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 245.6 ms