Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
FAM49AQ9H0Q0 RNU6-426P-201ENST00000516464 97 ntBASIC0.54□□□□□ -2.32
FAM49AQ9H0Q0 RNU6-531P-201ENST00000516694 104 ntBASIC0.54□□□□□ -2.32
FAM49AQ9H0Q0 RNU7-137P-201ENST00000516788 62 ntBASIC0.54□□□□□ -2.32
FAM49AQ9H0Q0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
FAM49AQ9H0Q0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.53□□□□□ -2.32
FAM49AQ9H0Q0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
FAM49AQ9H0Q0 Y_RNA.114-201ENST00000363265 113 ntBASIC0.53□□□□□ -2.32
FAM49AQ9H0Q0 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
FAM49AQ9H0Q0 MT-TR-201ENST00000387439 65 ntBASIC0.53□□□□□ -2.32
FAM49AQ9H0Q0 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
FAM49AQ9H0Q0 MIR1273G-201ENST00000577677 100 ntBASIC0.53□□□□□ -2.32
FAM49AQ9H0Q0 MIR3678-201ENST00000578455 94 ntBASIC0.53□□□□□ -2.32
FAM49AQ9H0Q0 Y_RNA.32-201ENST00000362589 110 ntBASIC0.52□□□□□ -2.33
FAM49AQ9H0Q0 RNA5SP133-201ENST00000363368 119 ntBASIC0.52□□□□□ -2.33
FAM49AQ9H0Q0 Y_RNA.180-201ENST00000363867 113 ntBASIC0.52□□□□□ -2.33
FAM49AQ9H0Q0 RNA5SP245-201ENST00000364239 121 ntBASIC0.52□□□□□ -2.33
FAM49AQ9H0Q0 Y_RNA.555-201ENST00000384673 110 ntBASIC0.52□□□□□ -2.33
FAM49AQ9H0Q0 MIR140-201ENST00000385282 100 ntBASIC0.52□□□□□ -2.33
FAM49AQ9H0Q0 RNU7-200P-201ENST00000516105 62 ntBASIC0.52□□□□□ -2.33
FAM49AQ9H0Q0 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
FAM49AQ9H0Q0 AC138749.4-201ENST00000563970 127 ntBASIC0.52□□□□□ -2.33
FAM49AQ9H0Q0 U6.109-201ENST00000636749 87 ntBASIC0.52□□□□□ -2.33
FAM49AQ9H0Q0 AC010487.4-201ENST00000637027 61 ntBASIC0.52□□□□□ -2.33
FAM49AQ9H0Q0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
FAM49AQ9H0Q0 RNU4-69P-201ENST00000410677 143 ntBASIC0.51□□□□□ -2.33
FAM49AQ9H0Q0 RNA5SP121-201ENST00000516537 101 ntBASIC0.51□□□□□ -2.33
FAM49AQ9H0Q0 SNORA31.14-201ENST00000516728 116 ntBASIC0.51□□□□□ -2.33
FAM49AQ9H0Q0 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
FAM49AQ9H0Q0 RNA5SP517-201ENST00000364724 117 ntBASIC0.5□□□□□ -2.33
FAM49AQ9H0Q0 Y_RNA.506-201ENST00000384494 102 ntBASIC0.5□□□□□ -2.33
FAM49AQ9H0Q0 RNU6-291P-201ENST00000384720 107 ntBASIC0.5□□□□□ -2.33
FAM49AQ9H0Q0 RNU6-735P-201ENST00000410612 107 ntBASIC0.5□□□□□ -2.33
FAM49AQ9H0Q0 RNU6-781P-201ENST00000516377 101 ntBASIC0.5□□□□□ -2.33
FAM49AQ9H0Q0 Y_RNA.692-201ENST00000516627 105 ntBASIC0.5□□□□□ -2.33
FAM49AQ9H0Q0 AP001328.1-201ENST00000528550 176 ntBASIC0.5□□□□□ -2.33
FAM49AQ9H0Q0 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
FAM49AQ9H0Q0 uc_338.16-201ENST00000621804 95 ntBASIC0.5□□□□□ -2.33
FAM49AQ9H0Q0 AP001340.1-201ENST00000624405 217 ntBASIC0.5□□□□□ -2.33
FAM49AQ9H0Q0 RNU6-235P-201ENST00000362644 107 ntBASIC0.49□□□□□ -2.33
FAM49AQ9H0Q0 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
FAM49AQ9H0Q0 RNA5SP117-201ENST00000365294 118 ntBASIC0.49□□□□□ -2.33
FAM49AQ9H0Q0 RNU6-616P-201ENST00000384353 107 ntBASIC0.49□□□□□ -2.33
FAM49AQ9H0Q0 RNU6-1321P-201ENST00000390905 107 ntBASIC0.49□□□□□ -2.33
FAM49AQ9H0Q0 RN7SKP19-201ENST00000516016 252 ntBASIC0.49□□□□□ -2.33
FAM49AQ9H0Q0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.49□□□□□ -2.33
FAM49AQ9H0Q0 Y_RNA.119-201ENST00000363301 96 ntBASIC0.48□□□□□ -2.33
FAM49AQ9H0Q0 SNORA36.1-201ENST00000363424 132 ntBASIC0.48□□□□□ -2.33
FAM49AQ9H0Q0 SNORA63.5-201ENST00000363548 123 ntBASIC0.48□□□□□ -2.33
FAM49AQ9H0Q0 Y_RNA.280-201ENST00000364765 112 ntBASIC0.48□□□□□ -2.33
FAM49AQ9H0Q0 Y_RNA.488-201ENST00000384403 102 ntBASIC0.48□□□□□ -2.33
FAM49AQ9H0Q0 Y_RNA.536-201ENST00000384621 113 ntBASIC0.48□□□□□ -2.33
FAM49AQ9H0Q0 MIR206-201ENST00000384872 86 ntBASIC0.48□□□□□ -2.33
FAM49AQ9H0Q0 MIR1263-201ENST00000408324 86 ntBASIC0.48□□□□□ -2.33
FAM49AQ9H0Q0 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
FAM49AQ9H0Q0 RNA5SP94-201ENST00000516917 108 ntBASIC0.48□□□□□ -2.33
FAM49AQ9H0Q0 DEFB131E-201ENST00000532329 154 ntBASIC0.48□□□□□ -2.33
FAM49AQ9H0Q0 Y_RNA.773-201ENST00000607168 90 ntBASIC0.48□□□□□ -2.33
FAM49AQ9H0Q0 AC087741.2-201ENST00000619415 172 ntBASIC0.48□□□□□ -2.33
FAM49AQ9H0Q0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
FAM49AQ9H0Q0 RNY1P2-201ENST00000364820 117 ntBASIC0.47□□□□□ -2.33
FAM49AQ9H0Q0 Y_RNA.464-201ENST00000384282 110 ntBASIC0.47□□□□□ -2.33
FAM49AQ9H0Q0 RNU6-535P-201ENST00000384722 107 ntBASIC0.47□□□□□ -2.33
FAM49AQ9H0Q0 MTND4LP9-201ENST00000427694 174 ntBASIC0.47□□□□□ -2.33
FAM49AQ9H0Q0 Y_RNA.697-201ENST00000516776 113 ntBASIC0.47□□□□□ -2.33
FAM49AQ9H0Q0 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
FAM49AQ9H0Q0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
FAM49AQ9H0Q0 SNORD114-10-201ENST00000363409 72 ntBASIC0.46□□□□□ -2.34
FAM49AQ9H0Q0 MIR548I1-201ENST00000408810 149 ntBASIC0.46□□□□□ -2.34
FAM49AQ9H0Q0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.46□□□□□ -2.34
FAM49AQ9H0Q0 AL158147.1-201ENST00000443970 75 ntBASIC0.46□□□□□ -2.34
FAM49AQ9H0Q0 RNU7-6P-201ENST00000516845 62 ntBASIC0.46□□□□□ -2.34
FAM49AQ9H0Q0 RNU6-1212P-201ENST00000517023 104 ntBASIC0.46□□□□□ -2.34
FAM49AQ9H0Q0 SNORA25.18-201ENST00000607153 114 ntBASIC0.46□□□□□ -2.34
FAM49AQ9H0Q0 Y_RNA.448-201ENST00000384185 108 ntBASIC0.45□□□□□ -2.34
FAM49AQ9H0Q0 RNU6-257P-201ENST00000410238 98 ntBASIC0.45□□□□□ -2.34
FAM49AQ9H0Q0 RNU6-765P-201ENST00000516916 99 ntBASIC0.45□□□□□ -2.34
FAM49AQ9H0Q0 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.45□□□□□ -2.34
FAM49AQ9H0Q0 MIR3668-201ENST00000582138 75 ntBASIC0.45□□□□□ -2.34
FAM49AQ9H0Q0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
FAM49AQ9H0Q0 AC092634.7-201ENST00000621022 103 ntBASIC0.45□□□□□ -2.34
FAM49AQ9H0Q0 RNU6-774P-201ENST00000363238 107 ntBASIC0.44□□□□□ -2.34
FAM49AQ9H0Q0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.44□□□□□ -2.34
FAM49AQ9H0Q0 Y_RNA.525-201ENST00000384570 113 ntBASIC0.44□□□□□ -2.34
FAM49AQ9H0Q0 Y_RNA.567-201ENST00000384736 106 ntBASIC0.44□□□□□ -2.34
FAM49AQ9H0Q0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.44□□□□□ -2.34
FAM49AQ9H0Q0 RNU6-1194P-201ENST00000516208 104 ntBASIC0.44□□□□□ -2.34
FAM49AQ9H0Q0 RNU6-1234P-201ENST00000516877 103 ntBASIC0.44□□□□□ -2.34
FAM49AQ9H0Q0 AP003327.1-201ENST00000529684 127 ntBASIC0.44□□□□□ -2.34
FAM49AQ9H0Q0 Y_RNA.568-201ENST00000384742 113 ntBASIC0.43□□□□□ -2.34
FAM49AQ9H0Q0 MIR1255B1-201ENST00000636325 63 ntBASIC0.43□□□□□ -2.34
FAM49AQ9H0Q0 MIR103A1-201ENST00000362165 78 ntBASIC0.42□□□□□ -2.34
FAM49AQ9H0Q0 RNU4-58P-201ENST00000363192 141 ntBASIC0.42□□□□□ -2.34
FAM49AQ9H0Q0 Y_RNA.258-201ENST00000364613 105 ntBASIC0.42□□□□□ -2.34
FAM49AQ9H0Q0 Y_RNA.299-201ENST00000364973 94 ntBASIC0.42□□□□□ -2.34
FAM49AQ9H0Q0 RNU6-209P-201ENST00000384118 107 ntBASIC0.42□□□□□ -2.34
FAM49AQ9H0Q0 Y_RNA.630-201ENST00000411370 108 ntBASIC0.42□□□□□ -2.34
FAM49AQ9H0Q0 SUMO1P3-201ENST00000439961 304 ntBASIC0.42□□□□□ -2.34
FAM49AQ9H0Q0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.42□□□□□ -2.34
FAM49AQ9H0Q0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms