Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 RNA5SP237-201ENST00000410414 113 ntBASIC0.43□□□□□ -2.34
CCSER1Q9C0I3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.43□□□□□ -2.34
CCSER1Q9C0I3 RNU7-137P-201ENST00000516788 62 ntBASIC0.43□□□□□ -2.34
CCSER1Q9C0I3 RNU7-156P-201ENST00000517214 74 ntBASIC0.43□□□□□ -2.34
CCSER1Q9C0I3 AC138749.4-201ENST00000563970 127 ntBASIC0.43□□□□□ -2.34
CCSER1Q9C0I3 MIR3646-201ENST00000578301 84 ntBASIC0.43□□□□□ -2.34
CCSER1Q9C0I3 AC090897.1-201ENST00000580909 226 ntBASIC0.43□□□□□ -2.34
CCSER1Q9C0I3 RN7SL793P-201ENST00000583259 296 ntBASIC0.43□□□□□ -2.34
CCSER1Q9C0I3 AC243829.6-201ENST00000612652 106 ntBASIC0.43□□□□□ -2.34
CCSER1Q9C0I3 MIR18A-201ENST00000362310 71 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 SNORD115-2-201ENST00000362842 82 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 SNORA63.5-201ENST00000363548 123 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 Y_RNA.247-201ENST00000364500 92 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 RNY1P2-201ENST00000364820 117 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 SNORD115-20-201ENST00000365099 82 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 RNU6-690P-201ENST00000365242 106 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 Y_RNA.357-201ENST00000365487 109 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 Y_RNA.464-201ENST00000384282 110 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 RNU6-616P-201ENST00000384353 107 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 Y_RNA.568-201ENST00000384742 113 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 RNU6-1321P-201ENST00000390905 107 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 SNORD100-201ENST00000408573 76 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 SUMO1P3-201ENST00000439961 304 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 RNU6-893P-201ENST00000458841 100 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 RNU5E-3P-201ENST00000515913 68 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 RNU6-971P-201ENST00000516920 106 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 RNU6-182P-201ENST00000516970 105 ntBASIC0.42□□□□□ -2.34
CCSER1Q9C0I3 SNORD114-23-201ENST00000363536 72 ntBASIC0.41□□□□□ -2.34
CCSER1Q9C0I3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.41□□□□□ -2.34
CCSER1Q9C0I3 RNU6-949P-201ENST00000384040 107 ntBASIC0.41□□□□□ -2.34
CCSER1Q9C0I3 Y_RNA.531-201ENST00000384589 121 ntBASIC0.41□□□□□ -2.34
CCSER1Q9C0I3 MIR644A-201ENST00000385262 94 ntBASIC0.41□□□□□ -2.34
CCSER1Q9C0I3 SNORD37.2-201ENST00000391075 66 ntBASIC0.41□□□□□ -2.34
CCSER1Q9C0I3 Y_RNA.586-201ENST00000391146 98 ntBASIC0.41□□□□□ -2.34
CCSER1Q9C0I3 RNU7-164P-201ENST00000459221 62 ntBASIC0.41□□□□□ -2.34
CCSER1Q9C0I3 RNU7-79P-201ENST00000516082 62 ntBASIC0.41□□□□□ -2.34
CCSER1Q9C0I3 RNA5SP480-201ENST00000516840 109 ntBASIC0.41□□□□□ -2.34
CCSER1Q9C0I3 MIR548X2-201ENST00000579776 100 ntBASIC0.41□□□□□ -2.34
CCSER1Q9C0I3 AC021443.1-201ENST00000604478 211 ntBASIC0.41□□□□□ -2.34
CCSER1Q9C0I3 AL035470.1-201ENST00000622571 220 ntBASIC0.41□□□□□ -2.34
CCSER1Q9C0I3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.41□□□□□ -2.34
CCSER1Q9C0I3 Y_RNA.344-201ENST00000365381 112 ntBASIC0.4□□□□□ -2.35
CCSER1Q9C0I3 RNU6-291P-201ENST00000384720 107 ntBASIC0.4□□□□□ -2.35
CCSER1Q9C0I3 SNORD93-201ENST00000408813 74 ntBASIC0.4□□□□□ -2.35
CCSER1Q9C0I3 AC002350.1-201ENST00000490759 375 ntBASIC0.4□□□□□ -2.35
CCSER1Q9C0I3 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
CCSER1Q9C0I3 RN7SKP19-201ENST00000516016 252 ntBASIC0.4□□□□□ -2.35
CCSER1Q9C0I3 RNA5SP33-201ENST00000516687 98 ntBASIC0.4□□□□□ -2.35
CCSER1Q9C0I3 RNU6-531P-201ENST00000516694 104 ntBASIC0.4□□□□□ -2.35
CCSER1Q9C0I3 SNORA31.14-201ENST00000516728 116 ntBASIC0.4□□□□□ -2.35
CCSER1Q9C0I3 AC133485.4-201ENST00000561835 220 ntBASIC0.4□□□□□ -2.35
CCSER1Q9C0I3 AC138907.4-201ENST00000570107 226 ntBASIC0.4□□□□□ -2.35
CCSER1Q9C0I3 MIR3613-201ENST00000579844 87 ntBASIC0.4□□□□□ -2.35
CCSER1Q9C0I3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
CCSER1Q9C0I3 AC090625.1-201ENST00000357130 210 ntBASIC0.39□□□□□ -2.35
CCSER1Q9C0I3 SNORD114-26-201ENST00000363543 72 ntBASIC0.39□□□□□ -2.35
CCSER1Q9C0I3 Y_RNA.549-201ENST00000384657 102 ntBASIC0.39□□□□□ -2.35
CCSER1Q9C0I3 MIR206-201ENST00000384872 86 ntBASIC0.39□□□□□ -2.35
CCSER1Q9C0I3 RNU6-1086P-201ENST00000410930 100 ntBASIC0.39□□□□□ -2.35
CCSER1Q9C0I3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.39□□□□□ -2.35
CCSER1Q9C0I3 AL158147.1-201ENST00000443970 75 ntBASIC0.39□□□□□ -2.35
CCSER1Q9C0I3 RPL39P25-201ENST00000449384 154 ntBASIC0.39□□□□□ -2.35
CCSER1Q9C0I3 RNU7-113P-201ENST00000459273 62 ntBASIC0.39□□□□□ -2.35
CCSER1Q9C0I3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.39□□□□□ -2.35
CCSER1Q9C0I3 RNU1-29P-201ENST00000606574 126 ntBASIC0.39□□□□□ -2.35
CCSER1Q9C0I3 AL137067.1-201ENST00000615933 120 ntBASIC0.39□□□□□ -2.35
CCSER1Q9C0I3 uc_338.16-201ENST00000621804 95 ntBASIC0.39□□□□□ -2.35
CCSER1Q9C0I3 AP001340.1-201ENST00000624405 217 ntBASIC0.39□□□□□ -2.35
CCSER1Q9C0I3 Y_RNA.261-201ENST00000364631 102 ntBASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 RNA5SP517-201ENST00000364724 117 ntBASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 SNORD58C-201ENST00000365223 64 ntBASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 RNY1P5-201ENST00000383890 115 ntBASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 RNY1P4-201ENST00000384595 115 ntBASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 MIR34C-201ENST00000384831 77 ntBASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 RNU4-83P-201ENST00000410863 133 ntBASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 RNU6-772P-201ENST00000516042 105 ntBASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 RNU6-1006P-201ENST00000516998 103 ntBASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 RNU6-448P-201ENST00000517052 107 ntBASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 MIR3668-201ENST00000582138 75 ntBASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 MIR6082-201ENST00000613604 109 ntBASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 MIR376B-201ENST00000614515 100 ntBASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 U6.109-201ENST00000636749 87 ntBASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 AC010487.4-201ENST00000637027 61 ntBASIC0.38□□□□□ -2.35
CCSER1Q9C0I3 RNU6-403P-201ENST00000363163 104 ntBASIC0.37□□□□□ -2.35
CCSER1Q9C0I3 RNA5SP133-201ENST00000363368 119 ntBASIC0.37□□□□□ -2.35
CCSER1Q9C0I3 RNU6-1062P-201ENST00000383908 107 ntBASIC0.37□□□□□ -2.35
CCSER1Q9C0I3 MIR1263-201ENST00000408324 86 ntBASIC0.37□□□□□ -2.35
CCSER1Q9C0I3 RNU6-863P-201ENST00000515989 104 ntBASIC0.37□□□□□ -2.35
CCSER1Q9C0I3 SNORD33.1-201ENST00000516213 88 ntBASIC0.37□□□□□ -2.35
CCSER1Q9C0I3 Y_RNA.488-201ENST00000384403 102 ntBASIC0.36□□□□□ -2.35
CCSER1Q9C0I3 RNU6-679P-201ENST00000391003 106 ntBASIC0.36□□□□□ -2.35
CCSER1Q9C0I3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.36□□□□□ -2.35
CCSER1Q9C0I3 AP001328.1-201ENST00000528550 176 ntBASIC0.36□□□□□ -2.35
CCSER1Q9C0I3 AP003327.1-201ENST00000529684 127 ntBASIC0.36□□□□□ -2.35
CCSER1Q9C0I3 SNORA25.18-201ENST00000607153 114 ntBASIC0.36□□□□□ -2.35
CCSER1Q9C0I3 MIR103A1-201ENST00000362165 78 ntBASIC0.35□□□□□ -2.35
CCSER1Q9C0I3 RNA5SP117-201ENST00000365294 118 ntBASIC0.35□□□□□ -2.35
CCSER1Q9C0I3 Y_RNA.448-201ENST00000384185 108 ntBASIC0.35□□□□□ -2.35
CCSER1Q9C0I3 MIR193B-201ENST00000384907 83 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms