Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 HLA-S-202ENST00000425174 53 ntBASIC-1.35□□□□□ -2.63
UPF3BQ9BZI7 AC097510.1-201ENST00000510945 133 ntBASIC-1.35□□□□□ -2.63
UPF3BQ9BZI7 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.35□□□□□ -2.63
UPF3BQ9BZI7 snoU83B.1-201ENST00000517136 88 ntBASIC-1.35□□□□□ -2.63
UPF3BQ9BZI7 MIR4460-201ENST00000577862 86 ntBASIC-1.35□□□□□ -2.63
UPF3BQ9BZI7 MIR4500-201ENST00000579472 76 ntBASIC-1.35□□□□□ -2.63
UPF3BQ9BZI7 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.36□□□□□ -2.63
UPF3BQ9BZI7 SNORD114-17-201ENST00000364699 75 ntBASIC-1.36□□□□□ -2.63
UPF3BQ9BZI7 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.36□□□□□ -2.63
UPF3BQ9BZI7 HSPE1P25-201ENST00000455484 251 ntBASIC-1.36□□□□□ -2.63
UPF3BQ9BZI7 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.36□□□□□ -2.63
UPF3BQ9BZI7 RNU7-30P-201ENST00000516835 62 ntBASIC-1.36□□□□□ -2.63
UPF3BQ9BZI7 SCARNA15-202ENST00000516881 127 ntBASIC-1.36□□□□□ -2.63
UPF3BQ9BZI7 AC006504.6-201ENST00000590142 199 ntBASIC-1.36□□□□□ -2.63
UPF3BQ9BZI7 AL008718.3-201ENST00000610217 321 ntBASIC-1.36□□□□□ -2.63
UPF3BQ9BZI7 MIR3688-2-201ENST00000636963 87 ntBASIC-1.36□□□□□ -2.63
UPF3BQ9BZI7 SNORD113-8-201ENST00000363497 74 ntBASIC-1.37□□□□□ -2.63
UPF3BQ9BZI7 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.37□□□□□ -2.63
UPF3BQ9BZI7 RNU6-476P-201ENST00000384726 107 ntBASIC-1.37□□□□□ -2.63
UPF3BQ9BZI7 SNORD63B-201ENST00000411005 70 ntBASIC-1.37□□□□□ -2.63
UPF3BQ9BZI7 RNU6-130P-201ENST00000411112 103 ntBASIC-1.37□□□□□ -2.63
UPF3BQ9BZI7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.37□□□□□ -2.63
UPF3BQ9BZI7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.37□□□□□ -2.63
UPF3BQ9BZI7 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.38□□□□□ -2.63
UPF3BQ9BZI7 RNU6-102P-201ENST00000384485 104 ntBASIC-1.38□□□□□ -2.63
UPF3BQ9BZI7 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.38□□□□□ -2.63
UPF3BQ9BZI7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.38□□□□□ -2.63
UPF3BQ9BZI7 AC016907.1-201ENST00000419483 435 ntBASIC-1.38□□□□□ -2.63
UPF3BQ9BZI7 AC244090.1-201ENST00000441884 93 ntBASIC-1.38□□□□□ -2.63
UPF3BQ9BZI7 AL731563.1-201ENST00000442202 214 ntBASIC-1.38□□□□□ -2.63
UPF3BQ9BZI7 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.38□□□□□ -2.63
UPF3BQ9BZI7 SERF1AP1-201ENST00000514575 187 ntBASIC-1.38□□□□□ -2.63
UPF3BQ9BZI7 SNORA40.14-201ENST00000516543 86 ntBASIC-1.38□□□□□ -2.63
UPF3BQ9BZI7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.38□□□□□ -2.63
UPF3BQ9BZI7 PART1_1.1-201ENST00000611761 217 ntBASIC-1.38□□□□□ -2.63
UPF3BQ9BZI7 AC093783.1-201ENST00000612976 329 ntBASIC-1.38□□□□□ -2.63
UPF3BQ9BZI7 MIR6854-201ENST00000614935 69 ntBASIC-1.38□□□□□ -2.63
UPF3BQ9BZI7 AL353813.1-201ENST00000440700 253 ntBASIC-1.39□□□□□ -2.63
UPF3BQ9BZI7 MTND1P29-201ENST00000448112 647 ntBASIC-1.39□□□□□ -2.63
UPF3BQ9BZI7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.39□□□□□ -2.63
UPF3BQ9BZI7 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.39□□□□□ -2.63
UPF3BQ9BZI7 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.39□□□□□ -2.63
UPF3BQ9BZI7 RNU6-570P-201ENST00000517051 105 ntBASIC-1.39□□□□□ -2.63
UPF3BQ9BZI7 MIR548AE2-201ENST00000583456 67 ntBASIC-1.39□□□□□ -2.63
UPF3BQ9BZI7 AL138825.1-201ENST00000618587 192 ntBASIC-1.39□□□□□ -2.63
UPF3BQ9BZI7 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.4□□□□□ -2.63
UPF3BQ9BZI7 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.4□□□□□ -2.63
UPF3BQ9BZI7 MT-TT-201ENST00000387460 66 ntBASIC-1.4□□□□□ -2.63
UPF3BQ9BZI7 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.4□□□□□ -2.63
UPF3BQ9BZI7 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-1.4□□□□□ -2.63
UPF3BQ9BZI7 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.4□□□□□ -2.63
UPF3BQ9BZI7 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.4□□□□□ -2.63
UPF3BQ9BZI7 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.4□□□□□ -2.63
UPF3BQ9BZI7 SNORD116.3-201ENST00000517176 78 ntBASIC-1.4□□□□□ -2.63
UPF3BQ9BZI7 AC026421.1-201ENST00000519101 163 ntBASIC-1.4□□□□□ -2.63
UPF3BQ9BZI7 MIR4520-1-201ENST00000582609 70 ntBASIC-1.4□□□□□ -2.63
UPF3BQ9BZI7 SNORD115-25-201ENST00000362619 82 ntBASIC-1.41□□□□□ -2.64
UPF3BQ9BZI7 RNU4-90P-201ENST00000362773 141 ntBASIC-1.41□□□□□ -2.64
UPF3BQ9BZI7 RNU6-973P-201ENST00000364690 107 ntBASIC-1.41□□□□□ -2.64
UPF3BQ9BZI7 RNY1P6-201ENST00000384193 109 ntBASIC-1.41□□□□□ -2.64
UPF3BQ9BZI7 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.41□□□□□ -2.64
UPF3BQ9BZI7 SNORD18.2-201ENST00000459604 70 ntBASIC-1.41□□□□□ -2.64
UPF3BQ9BZI7 snoU18.1-201ENST00000629629 71 ntBASIC-1.41□□□□□ -2.64
UPF3BQ9BZI7 RNU6-170P-201ENST00000362832 104 ntBASIC-1.42□□□□□ -2.64
UPF3BQ9BZI7 RNU6-662P-201ENST00000384253 104 ntBASIC-1.42□□□□□ -2.64
UPF3BQ9BZI7 RNU6-479P-201ENST00000516348 105 ntBASIC-1.42□□□□□ -2.64
UPF3BQ9BZI7 MIR5591-201ENST00000578248 65 ntBASIC-1.42□□□□□ -2.64
UPF3BQ9BZI7 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 RNU6-571P-201ENST00000384128 107 ntBASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 AL606845.1-201ENST00000404881 255 ntBASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 RNU7-48P-201ENST00000458875 63 ntBASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 MIR2113-201ENST00000459007 91 ntBASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 AC082651.2-201ENST00000496833 166 ntBASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 SNORA40.17-201ENST00000517256 115 ntBASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 AC068339.1-201ENST00000526965 141 ntBASIC-1.43□□□□□ -2.64
UPF3BQ9BZI7 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.44□□□□□ -2.64
UPF3BQ9BZI7 SNORA51.5-201ENST00000384126 131 ntBASIC-1.44□□□□□ -2.64
UPF3BQ9BZI7 MIR652-201ENST00000385278 98 ntBASIC-1.44□□□□□ -2.64
UPF3BQ9BZI7 MTND4LP30-201ENST00000454092 297 ntBASIC-1.44□□□□□ -2.64
UPF3BQ9BZI7 MIR1270-201ENST00000459320 83 ntBASIC-1.44□□□□□ -2.64
UPF3BQ9BZI7 SNORA20.3-201ENST00000516880 132 ntBASIC-1.44□□□□□ -2.64
UPF3BQ9BZI7 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.45□□□□□ -2.64
UPF3BQ9BZI7 SNORD116-1-201ENST00000384335 95 ntBASIC-1.45□□□□□ -2.64
UPF3BQ9BZI7 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.45□□□□□ -2.64
UPF3BQ9BZI7 MIR124-2-201ENST00000385081 109 ntBASIC-1.45□□□□□ -2.64
UPF3BQ9BZI7 RNU7-106P-201ENST00000459514 67 ntBASIC-1.45□□□□□ -2.64
UPF3BQ9BZI7 AC103591.3-201ENST00000608684 209 ntBASIC-1.45□□□□□ -2.64
UPF3BQ9BZI7 MIR376A1-201ENST00000616574 68 ntBASIC-1.45□□□□□ -2.64
UPF3BQ9BZI7 U4.5-201ENST00000617137 123 ntBASIC-1.45□□□□□ -2.64
UPF3BQ9BZI7 AL606534.2-204ENST00000635008 178 ntBASIC-1.45□□□□□ -2.64
UPF3BQ9BZI7 AC132825.6-201ENST00000638861 357 ntBASIC-1.45□□□□□ -2.64
UPF3BQ9BZI7 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.46□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms