Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AP001328.1-201ENST00000528550 176 ntBASIC0.43□□□□□ -2.34
RSPO3Q9BXY4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 Y_RNA.13-201ENST00000362403 112 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 RNU6-774P-201ENST00000363238 107 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 RNU6-716P-201ENST00000365621 103 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 Y_RNA.568-201ENST00000384742 113 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 MIR573-201ENST00000384964 99 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 MIR1257-201ENST00000408490 117 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 RNU6-257P-201ENST00000410238 98 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 RNU6-893P-201ENST00000458841 100 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 RNU6-781P-201ENST00000516377 101 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 RNU4-54P-201ENST00000516428 129 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 SNORD67.1-201ENST00000516618 108 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 Y_RNA.692-201ENST00000516627 105 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 RNY4P20-201ENST00000516678 93 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 AC243829.6-201ENST00000612652 106 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 AL136317.1-201ENST00000612653 226 ntBASIC0.42□□□□□ -2.34
RSPO3Q9BXY4 Y_RNA.42-201ENST00000362660 108 ntBASIC0.41□□□□□ -2.34
RSPO3Q9BXY4 RNY1P5-201ENST00000383890 115 ntBASIC0.41□□□□□ -2.34
RSPO3Q9BXY4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
RSPO3Q9BXY4 RNU6-1307P-201ENST00000391012 103 ntBASIC0.41□□□□□ -2.34
RSPO3Q9BXY4 RNU4-83P-201ENST00000410863 133 ntBASIC0.41□□□□□ -2.34
RSPO3Q9BXY4 AL158147.1-201ENST00000443970 75 ntBASIC0.41□□□□□ -2.34
RSPO3Q9BXY4 RN7SKP19-201ENST00000516016 252 ntBASIC0.41□□□□□ -2.34
RSPO3Q9BXY4 SNORA25.16-201ENST00000516741 121 ntBASIC0.41□□□□□ -2.34
RSPO3Q9BXY4 RNU7-137P-201ENST00000516788 62 ntBASIC0.41□□□□□ -2.34
RSPO3Q9BXY4 MIR3612-201ENST00000579753 87 ntBASIC0.41□□□□□ -2.34
RSPO3Q9BXY4 AC090897.1-201ENST00000580909 226 ntBASIC0.41□□□□□ -2.34
RSPO3Q9BXY4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.41□□□□□ -2.34
RSPO3Q9BXY4 AC105081.1-201ENST00000617727 106 ntBASIC0.41□□□□□ -2.34
RSPO3Q9BXY4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
RSPO3Q9BXY4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
RSPO3Q9BXY4 RNU6-235P-201ENST00000362644 107 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 RNU6-403P-201ENST00000363163 104 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 RNU6-364P-201ENST00000384387 107 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 MIR1197-201ENST00000408818 88 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 RNU6-447P-201ENST00000410293 104 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 RNU6-1118P-201ENST00000410382 104 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 RNU6-1076P-201ENST00000410397 104 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 RNU6-355P-201ENST00000410427 104 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 RNU6-791P-201ENST00000410467 104 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 RNU6-705P-201ENST00000410601 104 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 RNU6-735P-201ENST00000410612 107 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 RNU6-1100P-201ENST00000410691 104 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 RNU6-860P-201ENST00000410860 104 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 RNU6-1217P-201ENST00000411276 104 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 RNU6-785P-201ENST00000411324 104 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 AC002350.1-201ENST00000490759 375 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 MIR3133-201ENST00000583157 78 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 MIR6082-201ENST00000613604 109 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 U6.90-201ENST00000614007 104 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 AC087741.2-201ENST00000619415 172 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 U6.70-201ENST00000620287 104 ntBASIC0.4□□□□□ -2.35
RSPO3Q9BXY4 MIR18A-201ENST00000362310 71 ntBASIC0.39□□□□□ -2.35
RSPO3Q9BXY4 SNORD18A-201ENST00000363753 72 ntBASIC0.39□□□□□ -2.35
RSPO3Q9BXY4 Y_RNA.525-201ENST00000384570 113 ntBASIC0.39□□□□□ -2.35
RSPO3Q9BXY4 SNORD100-201ENST00000408573 76 ntBASIC0.39□□□□□ -2.35
RSPO3Q9BXY4 RNU4-69P-201ENST00000410677 143 ntBASIC0.39□□□□□ -2.35
RSPO3Q9BXY4 RNA5SP222-201ENST00000411039 105 ntBASIC0.39□□□□□ -2.35
RSPO3Q9BXY4 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
RSPO3Q9BXY4 Y_RNA.773-201ENST00000607168 90 ntBASIC0.39□□□□□ -2.35
RSPO3Q9BXY4 U7.2-201ENST00000607576 63 ntBASIC0.39□□□□□ -2.35
RSPO3Q9BXY4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
RSPO3Q9BXY4 RNU6-1062P-201ENST00000383908 107 ntBASIC0.38□□□□□ -2.35
RSPO3Q9BXY4 RNU6-187P-201ENST00000384139 106 ntBASIC0.38□□□□□ -2.35
RSPO3Q9BXY4 RNU6-616P-201ENST00000384353 107 ntBASIC0.38□□□□□ -2.35
RSPO3Q9BXY4 Y_RNA.586-201ENST00000391146 98 ntBASIC0.38□□□□□ -2.35
RSPO3Q9BXY4 MIR1263-201ENST00000408324 86 ntBASIC0.38□□□□□ -2.35
RSPO3Q9BXY4 Y_RNA.630-201ENST00000411370 108 ntBASIC0.38□□□□□ -2.35
RSPO3Q9BXY4 SNORA62.5-201ENST00000516634 120 ntBASIC0.38□□□□□ -2.35
RSPO3Q9BXY4 RNU6-531P-201ENST00000516694 104 ntBASIC0.38□□□□□ -2.35
RSPO3Q9BXY4 RNU6-1234P-201ENST00000516877 103 ntBASIC0.38□□□□□ -2.35
RSPO3Q9BXY4 RNU6-448P-201ENST00000517052 107 ntBASIC0.38□□□□□ -2.35
RSPO3Q9BXY4 AC138749.4-201ENST00000563970 127 ntBASIC0.38□□□□□ -2.35
RSPO3Q9BXY4 MTND5P34-201ENST00000568888 325 ntBASIC0.38□□□□□ -2.35
RSPO3Q9BXY4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.38□□□□□ -2.35
RSPO3Q9BXY4 RNA5SP133-201ENST00000363368 119 ntBASIC0.37□□□□□ -2.35
RSPO3Q9BXY4 RNA5SP245-201ENST00000364239 121 ntBASIC0.37□□□□□ -2.35
RSPO3Q9BXY4 RNU6-647P-201ENST00000364243 107 ntBASIC0.37□□□□□ -2.35
RSPO3Q9BXY4 MIR206-201ENST00000384872 86 ntBASIC0.37□□□□□ -2.35
RSPO3Q9BXY4 MIR644A-201ENST00000385262 94 ntBASIC0.37□□□□□ -2.35
RSPO3Q9BXY4 MIRLET7F2-201ENST00000385277 83 ntBASIC0.37□□□□□ -2.35
RSPO3Q9BXY4 RNU6-1321P-201ENST00000390905 107 ntBASIC0.37□□□□□ -2.35
RSPO3Q9BXY4 RNU6-971P-201ENST00000516920 106 ntBASIC0.37□□□□□ -2.35
RSPO3Q9BXY4 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.37□□□□□ -2.35
RSPO3Q9BXY4 AC023932.2-201ENST00000603176 175 ntBASIC0.37□□□□□ -2.35
RSPO3Q9BXY4 uc_338.16-201ENST00000621804 95 ntBASIC0.37□□□□□ -2.35
RSPO3Q9BXY4 Y_RNA.32-201ENST00000362589 110 ntBASIC0.36□□□□□ -2.35
RSPO3Q9BXY4 SNORD114-10-201ENST00000363409 72 ntBASIC0.36□□□□□ -2.35
RSPO3Q9BXY4 SNORA36.2-201ENST00000384004 127 ntBASIC0.36□□□□□ -2.35
RSPO3Q9BXY4 SNORA72.6-201ENST00000384520 129 ntBASIC0.36□□□□□ -2.35
RSPO3Q9BXY4 RNU6-291P-201ENST00000384720 107 ntBASIC0.36□□□□□ -2.35
RSPO3Q9BXY4 SNORA40-201ENST00000388090 126 ntBASIC0.36□□□□□ -2.35
RSPO3Q9BXY4 RNA5SP63-201ENST00000391225 112 ntBASIC0.36□□□□□ -2.35
RSPO3Q9BXY4 RPL39P25-201ENST00000449384 154 ntBASIC0.36□□□□□ -2.35
RSPO3Q9BXY4 RNU7-107P-201ENST00000459121 61 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 210.8 ms