Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RNU6-294P-201ENST00000364999 102 ntBASIC1.45□□□□□ -2.18
NDC1Q9BTX1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.45□□□□□ -2.18
NDC1Q9BTX1 MRPL35P3-201ENST00000421557 364 ntBASIC1.45□□□□□ -2.18
NDC1Q9BTX1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.45□□□□□ -2.18
NDC1Q9BTX1 AC133485.1-201ENST00000567176 124 ntBASIC1.45□□□□□ -2.18
NDC1Q9BTX1 SNORA4-201ENST00000584302 138 ntBASIC1.45□□□□□ -2.18
NDC1Q9BTX1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.45□□□□□ -2.18
NDC1Q9BTX1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
NDC1Q9BTX1 Y_RNA.220-201ENST00000364244 109 ntBASIC1.44□□□□□ -2.18
NDC1Q9BTX1 RNU6-580P-201ENST00000365159 107 ntBASIC1.44□□□□□ -2.18
NDC1Q9BTX1 Y_RNA.467-201ENST00000384297 102 ntBASIC1.44□□□□□ -2.18
NDC1Q9BTX1 U8.15-201ENST00000390947 134 ntBASIC1.44□□□□□ -2.18
NDC1Q9BTX1 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
NDC1Q9BTX1 MIR1304-201ENST00000408243 91 ntBASIC1.44□□□□□ -2.18
NDC1Q9BTX1 AC109327.2-201ENST00000448339 378 ntBASIC1.44□□□□□ -2.18
NDC1Q9BTX1 AP001362.1-201ENST00000625165 124 ntBASIC1.44□□□□□ -2.18
NDC1Q9BTX1 RNU1-92P-201ENST00000517017 135 ntBASIC1.43□□□□□ -2.18
NDC1Q9BTX1 MIR8070-201ENST00000616510 88 ntBASIC1.43□□□□□ -2.18
NDC1Q9BTX1 SEPT14P17-201ENST00000617978 177 ntBASIC1.43□□□□□ -2.18
NDC1Q9BTX1 Y_RNA.168-201ENST00000363740 102 ntBASIC1.42□□□□□ -2.18
NDC1Q9BTX1 RNU6-1163P-201ENST00000364516 107 ntBASIC1.42□□□□□ -2.18
NDC1Q9BTX1 Y_RNA.290-201ENST00000364879 114 ntBASIC1.42□□□□□ -2.18
NDC1Q9BTX1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.42□□□□□ -2.18
NDC1Q9BTX1 AL354695.1-201ENST00000427935 228 ntBASIC1.42□□□□□ -2.18
NDC1Q9BTX1 RNU6-162P-201ENST00000516228 103 ntBASIC1.42□□□□□ -2.18
NDC1Q9BTX1 RNU6-844P-201ENST00000517175 102 ntBASIC1.42□□□□□ -2.18
NDC1Q9BTX1 U7.3-201ENST00000616123 62 ntBASIC1.42□□□□□ -2.18
NDC1Q9BTX1 RNY1P2-201ENST00000364820 117 ntBASIC1.41□□□□□ -2.18
NDC1Q9BTX1 Y_RNA.330-201ENST00000365230 109 ntBASIC1.41□□□□□ -2.18
NDC1Q9BTX1 SNORA2B-201ENST00000384583 137 ntBASIC1.41□□□□□ -2.18
NDC1Q9BTX1 MT-TF-201ENST00000387314 71 ntBASIC1.41□□□□□ -2.18
NDC1Q9BTX1 SNORA75.2-201ENST00000391138 150 ntBASIC1.41□□□□□ -2.18
NDC1Q9BTX1 SNORA75.3-201ENST00000391231 150 ntBASIC1.41□□□□□ -2.18
NDC1Q9BTX1 MIR548G-201ENST00000408442 89 ntBASIC1.41□□□□□ -2.18
NDC1Q9BTX1 AC138749.4-201ENST00000563970 127 ntBASIC1.41□□□□□ -2.18
NDC1Q9BTX1 MIR4439-201ENST00000583746 80 ntBASIC1.41□□□□□ -2.18
NDC1Q9BTX1 RNU6-90P-201ENST00000606352 106 ntBASIC1.41□□□□□ -2.18
NDC1Q9BTX1 RNU6-86P-201ENST00000606534 107 ntBASIC1.41□□□□□ -2.18
NDC1Q9BTX1 ZNF209P-201ENST00000593450 2304 ntBASIC1.41□□□□□ -2.18
NDC1Q9BTX1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.41□□□□□ -2.18
NDC1Q9BTX1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
NDC1Q9BTX1 SNORA25.9-201ENST00000365087 128 ntBASIC1.4□□□□□ -2.19
NDC1Q9BTX1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.4□□□□□ -2.19
NDC1Q9BTX1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.4□□□□□ -2.19
NDC1Q9BTX1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
NDC1Q9BTX1 AL591704.2-201ENST00000421658 181 ntBASIC1.4□□□□□ -2.19
NDC1Q9BTX1 SPINT5P-201ENST00000448174 155 ntBASIC1.4□□□□□ -2.19
NDC1Q9BTX1 snoU13.21-201ENST00000459368 105 ntBASIC1.4□□□□□ -2.19
NDC1Q9BTX1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.4□□□□□ -2.19
NDC1Q9BTX1 Y_RNA.705-201ENST00000516862 110 ntBASIC1.4□□□□□ -2.19
NDC1Q9BTX1 MTND5P40-201ENST00000559945 246 ntBASIC1.4□□□□□ -2.19
NDC1Q9BTX1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.4□□□□□ -2.19
NDC1Q9BTX1 U6.109-201ENST00000636749 87 ntBASIC1.4□□□□□ -2.19
NDC1Q9BTX1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
NDC1Q9BTX1 Y_RNA.96-201ENST00000363092 109 ntBASIC1.39□□□□□ -2.19
NDC1Q9BTX1 RNA5SP133-201ENST00000363368 119 ntBASIC1.39□□□□□ -2.19
NDC1Q9BTX1 SNORA7.1-201ENST00000363750 139 ntBASIC1.39□□□□□ -2.19
NDC1Q9BTX1 SNORD38.2-201ENST00000384470 69 ntBASIC1.39□□□□□ -2.19
NDC1Q9BTX1 SNORA80D-201ENST00000384488 135 ntBASIC1.39□□□□□ -2.19
NDC1Q9BTX1 RNU6-813P-201ENST00000384691 107 ntBASIC1.39□□□□□ -2.19
NDC1Q9BTX1 MIR499A-201ENST00000384903 122 ntBASIC1.39□□□□□ -2.19
NDC1Q9BTX1 RNU6-910P-201ENST00000390844 107 ntBASIC1.39□□□□□ -2.19
NDC1Q9BTX1 RNU6-887P-201ENST00000410660 100 ntBASIC1.39□□□□□ -2.19
NDC1Q9BTX1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.39□□□□□ -2.19
NDC1Q9BTX1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
NDC1Q9BTX1 RNU6-997P-201ENST00000384725 107 ntBASIC1.38□□□□□ -2.19
NDC1Q9BTX1 Y_RNA.567-201ENST00000384736 106 ntBASIC1.38□□□□□ -2.19
NDC1Q9BTX1 MIR320A-201ENST00000385302 82 ntBASIC1.38□□□□□ -2.19
NDC1Q9BTX1 RNU6-972P-201ENST00000391208 107 ntBASIC1.38□□□□□ -2.19
NDC1Q9BTX1 MIR18B-201ENST00000454574 71 ntBASIC1.38□□□□□ -2.19
NDC1Q9BTX1 AC036111.3-201ENST00000526389 112 ntBASIC1.38□□□□□ -2.19
NDC1Q9BTX1 AC090897.1-201ENST00000580909 226 ntBASIC1.38□□□□□ -2.19
NDC1Q9BTX1 AL157834.3-201ENST00000615543 103 ntBASIC1.38□□□□□ -2.19
NDC1Q9BTX1 AC012676.2-201ENST00000619258 186 ntBASIC1.38□□□□□ -2.19
NDC1Q9BTX1 Y_RNA.119-201ENST00000363301 96 ntBASIC1.37□□□□□ -2.19
NDC1Q9BTX1 Y_RNA.173-201ENST00000363776 113 ntBASIC1.37□□□□□ -2.19
NDC1Q9BTX1 SNORD73B-201ENST00000364394 72 ntBASIC1.37□□□□□ -2.19
NDC1Q9BTX1 SNORD113.3-201ENST00000364630 78 ntBASIC1.37□□□□□ -2.19
NDC1Q9BTX1 Y_RNA.558-201ENST00000384685 113 ntBASIC1.37□□□□□ -2.19
NDC1Q9BTX1 SNORA70.22-201ENST00000517160 124 ntBASIC1.37□□□□□ -2.19
NDC1Q9BTX1 AC026421.1-201ENST00000519101 163 ntBASIC1.37□□□□□ -2.19
NDC1Q9BTX1 MIR4421-201ENST00000578133 69 ntBASIC1.37□□□□□ -2.19
NDC1Q9BTX1 MIR4500-201ENST00000579472 76 ntBASIC1.37□□□□□ -2.19
NDC1Q9BTX1 AC103810.7-201ENST00000607821 91 ntBASIC1.37□□□□□ -2.19
NDC1Q9BTX1 HSBP1P2-201ENST00000299671 229 ntBASIC1.36□□□□□ -2.19
NDC1Q9BTX1 RNU6-1244P-201ENST00000363614 108 ntBASIC1.36□□□□□ -2.19
NDC1Q9BTX1 Y_RNA.190-201ENST00000363964 101 ntBASIC1.36□□□□□ -2.19
NDC1Q9BTX1 SNORD93-201ENST00000408813 74 ntBASIC1.36□□□□□ -2.19
NDC1Q9BTX1 SNORD83.1-201ENST00000411362 77 ntBASIC1.36□□□□□ -2.19
NDC1Q9BTX1 RNU1-98P-201ENST00000458992 160 ntBASIC1.36□□□□□ -2.19
NDC1Q9BTX1 MIR4491-201ENST00000581087 68 ntBASIC1.36□□□□□ -2.19
NDC1Q9BTX1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
NDC1Q9BTX1 AC023934.1-201ENST00000574529 2389 ntBASIC1.35□□□□□ -2.19
NDC1Q9BTX1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
NDC1Q9BTX1 RNU1-36P-201ENST00000365130 165 ntBASIC1.35□□□□□ -2.19
NDC1Q9BTX1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.35□□□□□ -2.19
NDC1Q9BTX1 RNU7-21P-201ENST00000459430 62 ntBASIC1.35□□□□□ -2.19
NDC1Q9BTX1 SNORD79.1-201ENST00000516069 84 ntBASIC1.35□□□□□ -2.19
NDC1Q9BTX1 AC023827.1-201ENST00000569247 97 ntBASIC1.35□□□□□ -2.19
NDC1Q9BTX1 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 206.4 ms