Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RNU6-409P-201ENST00000384114 104 ntBASIC1.1□□□□□ -2.23
VRK1Q99986 Y_RNA.448-201ENST00000384185 108 ntBASIC1.1□□□□□ -2.23
VRK1Q99986 RNU6-429P-201ENST00000384582 108 ntBASIC1.1□□□□□ -2.23
VRK1Q99986 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
VRK1Q99986 SNORD89-201ENST00000390981 114 ntBASIC1.1□□□□□ -2.23
VRK1Q99986 RNU4-83P-201ENST00000410863 133 ntBASIC1.1□□□□□ -2.23
VRK1Q99986 RNA5SP255-201ENST00000516370 107 ntBASIC1.1□□□□□ -2.23
VRK1Q99986 RNU6-589P-201ENST00000516485 107 ntBASIC1.1□□□□□ -2.23
VRK1Q99986 RNU7-156P-201ENST00000517214 74 ntBASIC1.1□□□□□ -2.23
VRK1Q99986 AC138749.4-201ENST00000563970 127 ntBASIC1.1□□□□□ -2.23
VRK1Q99986 AC025627.3-201ENST00000582078 182 ntBASIC1.1□□□□□ -2.23
VRK1Q99986 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.1□□□□□ -2.23
VRK1Q99986 Y_RNA.226-201ENST00000364337 114 ntBASIC1.09□□□□□ -2.23
VRK1Q99986 RNU6-1307P-201ENST00000391012 103 ntBASIC1.09□□□□□ -2.23
VRK1Q99986 MIR1287-201ENST00000408492 90 ntBASIC1.09□□□□□ -2.23
VRK1Q99986 RNU6-765P-201ENST00000516916 99 ntBASIC1.09□□□□□ -2.23
VRK1Q99986 AC068339.1-201ENST00000526965 141 ntBASIC1.09□□□□□ -2.23
VRK1Q99986 RMST_2.1-201ENST00000617263 136 ntBASIC1.09□□□□□ -2.23
VRK1Q99986 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.24
VRK1Q99986 RNA5SP133-201ENST00000363368 119 ntBASIC1.08□□□□□ -2.24
VRK1Q99986 RNU6-865P-201ENST00000364772 107 ntBASIC1.08□□□□□ -2.24
VRK1Q99986 RNU6-364P-201ENST00000384387 107 ntBASIC1.08□□□□□ -2.24
VRK1Q99986 SNORA40.6-201ENST00000391153 128 ntBASIC1.08□□□□□ -2.24
VRK1Q99986 RNU6-733P-201ENST00000410759 104 ntBASIC1.08□□□□□ -2.24
VRK1Q99986 AC004223.1-201ENST00000479840 271 ntBASIC1.08□□□□□ -2.24
VRK1Q99986 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.08□□□□□ -2.24
VRK1Q99986 RNU6-1194P-201ENST00000516208 104 ntBASIC1.08□□□□□ -2.24
VRK1Q99986 MIR5009-201ENST00000578736 100 ntBASIC1.08□□□□□ -2.24
VRK1Q99986 MIR6082-201ENST00000613604 109 ntBASIC1.08□□□□□ -2.24
VRK1Q99986 RNU6-1313P-201ENST00000362622 102 ntBASIC1.07□□□□□ -2.24
VRK1Q99986 RNU6-403P-201ENST00000363163 104 ntBASIC1.07□□□□□ -2.24
VRK1Q99986 Y_RNA.155-201ENST00000363632 101 ntBASIC1.07□□□□□ -2.24
VRK1Q99986 RNU6-1325P-201ENST00000364905 105 ntBASIC1.07□□□□□ -2.24
VRK1Q99986 Y_RNA.323-201ENST00000365157 109 ntBASIC1.07□□□□□ -2.24
VRK1Q99986 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
VRK1Q99986 MIR520F-201ENST00000384824 87 ntBASIC1.07□□□□□ -2.24
VRK1Q99986 MIR499A-201ENST00000384903 122 ntBASIC1.07□□□□□ -2.24
VRK1Q99986 PDCD5P2-201ENST00000507570 312 ntBASIC1.07□□□□□ -2.24
VRK1Q99986 MIR8066-201ENST00000617280 78 ntBASIC1.07□□□□□ -2.24
VRK1Q99986 AP001362.1-201ENST00000625165 124 ntBASIC1.07□□□□□ -2.24
VRK1Q99986 U6.109-201ENST00000636749 87 ntBASIC1.07□□□□□ -2.24
VRK1Q99986 Y_RNA.42-201ENST00000362660 108 ntBASIC1.06□□□□□ -2.24
VRK1Q99986 RNU6-1107P-201ENST00000364817 104 ntBASIC1.06□□□□□ -2.24
VRK1Q99986 U8.6-201ENST00000364939 135 ntBASIC1.06□□□□□ -2.24
VRK1Q99986 RNU6-53P-201ENST00000365367 106 ntBASIC1.06□□□□□ -2.24
VRK1Q99986 SNORD105-201ENST00000386910 85 ntBASIC1.06□□□□□ -2.24
VRK1Q99986 RNU6-679P-201ENST00000391003 106 ntBASIC1.06□□□□□ -2.24
VRK1Q99986 RNU1-119P-201ENST00000391122 165 ntBASIC1.06□□□□□ -2.24
VRK1Q99986 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
VRK1Q99986 SNORA7.5-201ENST00000410672 110 ntBASIC1.06□□□□□ -2.24
VRK1Q99986 RNU7-102P-201ENST00000458948 62 ntBASIC1.06□□□□□ -2.24
VRK1Q99986 Y_RNA.709-201ENST00000516952 92 ntBASIC1.06□□□□□ -2.24
VRK1Q99986 MIR4661-201ENST00000582720 75 ntBASIC1.06□□□□□ -2.24
VRK1Q99986 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
VRK1Q99986 MIR376B-201ENST00000614515 100 ntBASIC1.06□□□□□ -2.24
VRK1Q99986 Y_RNA.13-201ENST00000362403 112 ntBASIC1.05□□□□□ -2.24
VRK1Q99986 RNU4-58P-201ENST00000363192 141 ntBASIC1.05□□□□□ -2.24
VRK1Q99986 Y_RNA.119-201ENST00000363301 96 ntBASIC1.05□□□□□ -2.24
VRK1Q99986 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.05□□□□□ -2.24
VRK1Q99986 AL353813.1-201ENST00000440700 253 ntBASIC1.05□□□□□ -2.24
VRK1Q99986 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
VRK1Q99986 MIR3660-201ENST00000584845 100 ntBASIC1.05□□□□□ -2.24
VRK1Q99986 RNU6-215P-201ENST00000365169 102 ntBASIC1.04□□□□□ -2.24
VRK1Q99986 Y_RNA.360-201ENST00000365512 102 ntBASIC1.04□□□□□ -2.24
VRK1Q99986 MIR605-201ENST00000385078 83 ntBASIC1.04□□□□□ -2.24
VRK1Q99986 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
VRK1Q99986 SNORA25.16-201ENST00000516741 121 ntBASIC1.04□□□□□ -2.24
VRK1Q99986 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.04□□□□□ -2.24
VRK1Q99986 AL512310.12-203ENST00000640543 90 ntBASIC1.04□□□□□ -2.24
VRK1Q99986 Y_RNA.224-201ENST00000364308 111 ntBASIC1.03□□□□□ -2.24
VRK1Q99986 RNU6-1014P-201ENST00000383940 103 ntBASIC1.03□□□□□ -2.24
VRK1Q99986 SNORA72.6-201ENST00000384520 129 ntBASIC1.03□□□□□ -2.24
VRK1Q99986 MIR34C-201ENST00000384831 77 ntBASIC1.03□□□□□ -2.24
VRK1Q99986 AP003327.1-201ENST00000529684 127 ntBASIC1.03□□□□□ -2.24
VRK1Q99986 DEFB131E-201ENST00000532329 154 ntBASIC1.03□□□□□ -2.24
VRK1Q99986 MIR4694-201ENST00000578534 80 ntBASIC1.03□□□□□ -2.24
VRK1Q99986 AC090897.1-201ENST00000580909 226 ntBASIC1.03□□□□□ -2.24
VRK1Q99986 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
VRK1Q99986 Y_RNA.377-201ENST00000365644 108 ntBASIC1.02□□□□□ -2.25
VRK1Q99986 SNORD20-201ENST00000384550 80 ntBASIC1.02□□□□□ -2.25
VRK1Q99986 MIR520H-201ENST00000385126 88 ntBASIC1.02□□□□□ -2.25
VRK1Q99986 RNU6-531P-201ENST00000516694 104 ntBASIC1.02□□□□□ -2.25
VRK1Q99986 RNA5SP102-201ENST00000516865 106 ntBASIC1.02□□□□□ -2.25
VRK1Q99986 AC008608.1-201ENST00000603910 127 ntBASIC1.02□□□□□ -2.25
VRK1Q99986 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.02□□□□□ -2.25
VRK1Q99986 HSBP1P2-201ENST00000299671 229 ntBASIC1.01□□□□□ -2.25
VRK1Q99986 Y_RNA.116-201ENST00000363292 103 ntBASIC1.01□□□□□ -2.25
VRK1Q99986 RNU6-1335P-201ENST00000365426 107 ntBASIC1.01□□□□□ -2.25
VRK1Q99986 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
VRK1Q99986 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
VRK1Q99986 RNU6-1201P-201ENST00000384227 107 ntBASIC1.01□□□□□ -2.25
VRK1Q99986 SNORD38.2-201ENST00000384470 69 ntBASIC1.01□□□□□ -2.25
VRK1Q99986 RNY4P18-201ENST00000391107 89 ntBASIC1.01□□□□□ -2.25
VRK1Q99986 AC087343.1-201ENST00000477341 475 ntBASIC1.01□□□□□ -2.25
VRK1Q99986 RNU6-919P-201ENST00000516731 104 ntBASIC1.01□□□□□ -2.25
VRK1Q99986 RNU6-1006P-201ENST00000516998 103 ntBASIC1.01□□□□□ -2.25
VRK1Q99986 AL442128.1-201ENST00000615151 90 ntBASIC1.01□□□□□ -2.25
VRK1Q99986 RNY3P2-201ENST00000362918 102 ntBASIC1□□□□□ -2.25
VRK1Q99986 SNORD38.1-201ENST00000363863 68 ntBASIC1□□□□□ -2.25
VRK1Q99986 Y_RNA.191-201ENST00000363972 113 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms