Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC087741.2-201ENST00000619415 172 ntBASIC0.78□□□□□ -2.28
NPAS1Q99742 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.77□□□□□ -2.29
NPAS1Q99742 RNU7-48P-201ENST00000458875 63 ntBASIC0.77□□□□□ -2.29
NPAS1Q99742 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
NPAS1Q99742 Y_RNA.42-201ENST00000362660 108 ntBASIC0.76□□□□□ -2.29
NPAS1Q99742 Y_RNA.218-201ENST00000364218 104 ntBASIC0.76□□□□□ -2.29
NPAS1Q99742 SNORA25.9-201ENST00000365087 128 ntBASIC0.76□□□□□ -2.29
NPAS1Q99742 RNU6-959P-201ENST00000384671 107 ntBASIC0.76□□□□□ -2.29
NPAS1Q99742 MIR548D2-201ENST00000384955 97 ntBASIC0.76□□□□□ -2.29
NPAS1Q99742 Y_RNA.649-201ENST00000459077 103 ntBASIC0.76□□□□□ -2.29
NPAS1Q99742 RPS29P1-201ENST00000465274 159 ntBASIC0.76□□□□□ -2.29
NPAS1Q99742 RNU6-1333P-201ENST00000516162 93 ntBASIC0.76□□□□□ -2.29
NPAS1Q99742 RNU6-469P-201ENST00000516253 101 ntBASIC0.76□□□□□ -2.29
NPAS1Q99742 AC138749.4-201ENST00000563970 127 ntBASIC0.76□□□□□ -2.29
NPAS1Q99742 MIR4500-201ENST00000579472 76 ntBASIC0.76□□□□□ -2.29
NPAS1Q99742 SNORD115-35-201ENST00000365122 82 ntBASIC0.75□□□□□ -2.29
NPAS1Q99742 RNU6-110P-201ENST00000384508 104 ntBASIC0.75□□□□□ -2.29
NPAS1Q99742 MIR548A3-201ENST00000385297 97 ntBASIC0.75□□□□□ -2.29
NPAS1Q99742 RNU6-679P-201ENST00000391003 106 ntBASIC0.75□□□□□ -2.29
NPAS1Q99742 RNU6-735P-201ENST00000410612 107 ntBASIC0.75□□□□□ -2.29
NPAS1Q99742 SNORA7.5-201ENST00000410672 110 ntBASIC0.75□□□□□ -2.29
NPAS1Q99742 AC096949.1-201ENST00000412047 152 ntBASIC0.75□□□□□ -2.29
NPAS1Q99742 AC002350.1-201ENST00000490759 375 ntBASIC0.75□□□□□ -2.29
NPAS1Q99742 RNU6-521P-201ENST00000516663 105 ntBASIC0.75□□□□□ -2.29
NPAS1Q99742 RNY1P2-201ENST00000364820 117 ntBASIC0.74□□□□□ -2.29
NPAS1Q99742 Y_RNA.328-201ENST00000365208 113 ntBASIC0.74□□□□□ -2.29
NPAS1Q99742 SNORD116-14-201ENST00000383894 92 ntBASIC0.74□□□□□ -2.29
NPAS1Q99742 SNORD116-17-201ENST00000383929 92 ntBASIC0.74□□□□□ -2.29
NPAS1Q99742 SNORD116-15-201ENST00000384445 92 ntBASIC0.74□□□□□ -2.29
NPAS1Q99742 Y_RNA.507-201ENST00000384500 99 ntBASIC0.74□□□□□ -2.29
NPAS1Q99742 RNU6-535P-201ENST00000384722 107 ntBASIC0.74□□□□□ -2.29
NPAS1Q99742 SNORD116-19-201ENST00000384729 92 ntBASIC0.74□□□□□ -2.29
NPAS1Q99742 RNU6-765P-201ENST00000516916 99 ntBASIC0.74□□□□□ -2.29
NPAS1Q99742 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.74□□□□□ -2.29
NPAS1Q99742 MTND5P34-201ENST00000568888 325 ntBASIC0.74□□□□□ -2.29
NPAS1Q99742 MIR4452-201ENST00000583004 71 ntBASIC0.74□□□□□ -2.29
NPAS1Q99742 Y_RNA.773-201ENST00000607168 90 ntBASIC0.74□□□□□ -2.29
NPAS1Q99742 MIR6857-201ENST00000613267 93 ntBASIC0.74□□□□□ -2.29
NPAS1Q99742 U6.95-201ENST00000636931 70 ntBASIC0.74□□□□□ -2.29
NPAS1Q99742 AL512310.12-203ENST00000640543 90 ntBASIC0.74□□□□□ -2.29
NPAS1Q99742 Y_RNA.127-201ENST00000363386 109 ntBASIC0.73□□□□□ -2.29
NPAS1Q99742 Y_RNA.155-201ENST00000363632 101 ntBASIC0.73□□□□□ -2.29
NPAS1Q99742 MIR548A1-201ENST00000385041 97 ntBASIC0.73□□□□□ -2.29
NPAS1Q99742 MIRLET7F2-201ENST00000385277 83 ntBASIC0.73□□□□□ -2.29
NPAS1Q99742 AC008267.6-201ENST00000441664 139 ntBASIC0.73□□□□□ -2.29
NPAS1Q99742 RNU6-659P-201ENST00000516454 104 ntBASIC0.73□□□□□ -2.29
NPAS1Q99742 RNU6-62P-201ENST00000516526 102 ntBASIC0.73□□□□□ -2.29
NPAS1Q99742 AP003327.1-201ENST00000529684 127 ntBASIC0.73□□□□□ -2.29
NPAS1Q99742 AP001362.1-201ENST00000625165 124 ntBASIC0.73□□□□□ -2.29
NPAS1Q99742 MIR1255B1-201ENST00000636325 63 ntBASIC0.73□□□□□ -2.29
NPAS1Q99742 AC132825.6-201ENST00000638861 357 ntBASIC0.73□□□□□ -2.29
NPAS1Q99742 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 MIR18A-201ENST00000362310 71 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 SNORD115-19-201ENST00000363098 82 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 SNORD115-18-201ENST00000363293 82 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 Y_RNA.191-201ENST00000363972 113 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 Y_RNA.226-201ENST00000364337 114 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 SNORD115-17-201ENST00000364612 82 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 RNU4-45P-201ENST00000365469 141 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 Y_RNA.536-201ENST00000384621 113 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 MIR499A-201ENST00000384903 122 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 SNORD100-201ENST00000408573 76 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 Y_RNA.712-201ENST00000517011 92 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 MIR3914-2-201ENST00000637339 95 ntBASIC0.72□□□□□ -2.29
NPAS1Q99742 RNU6-429P-201ENST00000384582 108 ntBASIC0.71□□□□□ -2.3
NPAS1Q99742 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
NPAS1Q99742 MIR3910-1-201ENST00000580936 111 ntBASIC0.71□□□□□ -2.3
NPAS1Q99742 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
NPAS1Q99742 Y_RNA.174-201ENST00000363781 105 ntBASIC0.7□□□□□ -2.3
NPAS1Q99742 RNU4-67P-201ENST00000364569 141 ntBASIC0.7□□□□□ -2.3
NPAS1Q99742 RNU6-81P-201ENST00000365608 104 ntBASIC0.7□□□□□ -2.3
NPAS1Q99742 RNU6-409P-201ENST00000384114 104 ntBASIC0.7□□□□□ -2.3
NPAS1Q99742 SNORD38.2-201ENST00000384470 69 ntBASIC0.7□□□□□ -2.3
NPAS1Q99742 RNU6-1117P-201ENST00000384525 104 ntBASIC0.7□□□□□ -2.3
NPAS1Q99742 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.7□□□□□ -2.3
NPAS1Q99742 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.7□□□□□ -2.3
NPAS1Q99742 AC004941.2-201ENST00000427009 228 ntBASIC0.7□□□□□ -2.3
NPAS1Q99742 AC007012.1-201ENST00000567192 175 ntBASIC0.7□□□□□ -2.3
NPAS1Q99742 SNORA63.5-201ENST00000363548 123 ntBASIC0.69□□□□□ -2.3
NPAS1Q99742 Y_RNA.261-201ENST00000364631 102 ntBASIC0.69□□□□□ -2.3
NPAS1Q99742 Y_RNA.344-201ENST00000365381 112 ntBASIC0.69□□□□□ -2.3
NPAS1Q99742 RNU6-291P-201ENST00000384720 107 ntBASIC0.69□□□□□ -2.3
NPAS1Q99742 MIR644A-201ENST00000385262 94 ntBASIC0.69□□□□□ -2.3
NPAS1Q99742 RNU6-816P-201ENST00000390914 107 ntBASIC0.69□□□□□ -2.3
NPAS1Q99742 RNU6-1268P-201ENST00000391214 107 ntBASIC0.69□□□□□ -2.3
NPAS1Q99742 RNU6-1239P-201ENST00000391310 107 ntBASIC0.69□□□□□ -2.3
NPAS1Q99742 SNORD33.1-201ENST00000516213 88 ntBASIC0.69□□□□□ -2.3
NPAS1Q99742 MTND5P40-201ENST00000559945 246 ntBASIC0.69□□□□□ -2.3
NPAS1Q99742 MIR3678-201ENST00000578455 94 ntBASIC0.69□□□□□ -2.3
NPAS1Q99742 AL670379.3-201ENST00000605040 251 ntBASIC0.69□□□□□ -2.3
NPAS1Q99742 MIR376B-201ENST00000614515 100 ntBASIC0.69□□□□□ -2.3
NPAS1Q99742 Y_RNA.362-201ENST00000365518 110 ntBASIC0.68□□□□□ -2.3
NPAS1Q99742 RNU6-1307P-201ENST00000391012 103 ntBASIC0.68□□□□□ -2.3
NPAS1Q99742 AL365222.1-201ENST00000614661 98 ntBASIC0.68□□□□□ -2.3
NPAS1Q99742 RNU6-363P-201ENST00000362895 105 ntBASIC0.67□□□□□ -2.3
NPAS1Q99742 Y_RNA.224-201ENST00000364308 111 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms