Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 Y_RNA.298-201ENST00000364960 107 ntBASIC0.52□□□□□ -2.33
RAD9AQ99638 RNU6-945P-201ENST00000383947 107 ntBASIC0.52□□□□□ -2.33
RAD9AQ99638 SNORA25.12-201ENST00000516202 82 ntBASIC0.52□□□□□ -2.33
RAD9AQ99638 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.52□□□□□ -2.33
RAD9AQ99638 AP003327.1-201ENST00000529684 127 ntBASIC0.52□□□□□ -2.33
RAD9AQ99638 MIR548X2-201ENST00000579776 100 ntBASIC0.52□□□□□ -2.33
RAD9AQ99638 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
RAD9AQ99638 RNU6-915P-201ENST00000364943 103 ntBASIC0.51□□□□□ -2.33
RAD9AQ99638 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
RAD9AQ99638 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.51□□□□□ -2.33
RAD9AQ99638 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.51□□□□□ -2.33
RAD9AQ99638 Y_RNA.692-201ENST00000516627 105 ntBASIC0.51□□□□□ -2.33
RAD9AQ99638 RNU6-765P-201ENST00000516916 99 ntBASIC0.51□□□□□ -2.33
RAD9AQ99638 AC108081.1-201ENST00000604358 221 ntBASIC0.51□□□□□ -2.33
RAD9AQ99638 AL137067.1-201ENST00000615933 120 ntBASIC0.51□□□□□ -2.33
RAD9AQ99638 Y_RNA.299-201ENST00000364973 94 ntBASIC0.5□□□□□ -2.33
RAD9AQ99638 Y_RNA.400-201ENST00000383963 111 ntBASIC0.5□□□□□ -2.33
RAD9AQ99638 Y_RNA.555-201ENST00000384673 110 ntBASIC0.5□□□□□ -2.33
RAD9AQ99638 RNU6-679P-201ENST00000391003 106 ntBASIC0.5□□□□□ -2.33
RAD9AQ99638 RNU4-69P-201ENST00000410677 143 ntBASIC0.5□□□□□ -2.33
RAD9AQ99638 RN7SKP12-201ENST00000516275 143 ntBASIC0.5□□□□□ -2.33
RAD9AQ99638 SNORD67.1-201ENST00000516618 108 ntBASIC0.5□□□□□ -2.33
RAD9AQ99638 SNORA25.16-201ENST00000516741 121 ntBASIC0.5□□□□□ -2.33
RAD9AQ99638 MIR3121-201ENST00000579680 77 ntBASIC0.5□□□□□ -2.33
RAD9AQ99638 MIR2909-201ENST00000617113 69 ntBASIC0.5□□□□□ -2.33
RAD9AQ99638 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
RAD9AQ99638 RNY4P20-201ENST00000516678 93 ntBASIC0.49□□□□□ -2.33
RAD9AQ99638 RNU7-137P-201ENST00000516788 62 ntBASIC0.49□□□□□ -2.33
RAD9AQ99638 DEFB131E-201ENST00000532329 154 ntBASIC0.49□□□□□ -2.33
RAD9AQ99638 MIR3678-201ENST00000578455 94 ntBASIC0.49□□□□□ -2.33
RAD9AQ99638 AL359881.1-201ENST00000602916 267 ntBASIC0.49□□□□□ -2.33
RAD9AQ99638 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.49□□□□□ -2.33
RAD9AQ99638 RNA5SP133-201ENST00000363368 119 ntBASIC0.48□□□□□ -2.33
RAD9AQ99638 SNORD114-10-201ENST00000363409 72 ntBASIC0.48□□□□□ -2.33
RAD9AQ99638 RNA5SP62-201ENST00000363457 110 ntBASIC0.48□□□□□ -2.33
RAD9AQ99638 Y_RNA.215-201ENST00000364204 112 ntBASIC0.48□□□□□ -2.33
RAD9AQ99638 MIR1270-201ENST00000459320 83 ntBASIC0.48□□□□□ -2.33
RAD9AQ99638 MTND5P41-201ENST00000517498 206 ntBASIC0.48□□□□□ -2.33
RAD9AQ99638 AP001328.1-201ENST00000528550 176 ntBASIC0.48□□□□□ -2.33
RAD9AQ99638 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.48□□□□□ -2.33
RAD9AQ99638 AC021753.1-201ENST00000635724 168 ntBASIC0.48□□□□□ -2.33
RAD9AQ99638 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
RAD9AQ99638 Y_RNA.420-201ENST00000384043 110 ntBASIC0.47□□□□□ -2.33
RAD9AQ99638 SNORA50A-201ENST00000384225 134 ntBASIC0.47□□□□□ -2.33
RAD9AQ99638 Y_RNA.697-201ENST00000516776 113 ntBASIC0.47□□□□□ -2.33
RAD9AQ99638 AC022523.2-201ENST00000561045 150 ntBASIC0.47□□□□□ -2.33
RAD9AQ99638 AC105081.1-201ENST00000617727 106 ntBASIC0.47□□□□□ -2.33
RAD9AQ99638 AC092634.7-201ENST00000621022 103 ntBASIC0.47□□□□□ -2.33
RAD9AQ99638 AP001340.1-201ENST00000624405 217 ntBASIC0.47□□□□□ -2.33
RAD9AQ99638 U6.109-201ENST00000636749 87 ntBASIC0.47□□□□□ -2.33
RAD9AQ99638 RNU4-58P-201ENST00000363192 141 ntBASIC0.46□□□□□ -2.34
RAD9AQ99638 Y_RNA.536-201ENST00000384621 113 ntBASIC0.46□□□□□ -2.34
RAD9AQ99638 MIR569-201ENST00000385228 96 ntBASIC0.46□□□□□ -2.34
RAD9AQ99638 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
RAD9AQ99638 RNU6-469P-201ENST00000516253 101 ntBASIC0.46□□□□□ -2.34
RAD9AQ99638 RNA5SP395-201ENST00000516567 118 ntBASIC0.46□□□□□ -2.34
RAD9AQ99638 SNORA62.5-201ENST00000516634 120 ntBASIC0.46□□□□□ -2.34
RAD9AQ99638 RNU6-531P-201ENST00000516694 104 ntBASIC0.46□□□□□ -2.34
RAD9AQ99638 RNA5SP94-201ENST00000516917 108 ntBASIC0.46□□□□□ -2.34
RAD9AQ99638 MTND5P34-201ENST00000568888 325 ntBASIC0.46□□□□□ -2.34
RAD9AQ99638 uc_338.16-201ENST00000621804 95 ntBASIC0.46□□□□□ -2.34
RAD9AQ99638 Y_RNA.32-201ENST00000362589 110 ntBASIC0.45□□□□□ -2.34
RAD9AQ99638 Y_RNA.114-201ENST00000363265 113 ntBASIC0.45□□□□□ -2.34
RAD9AQ99638 Y_RNA.174-201ENST00000363781 105 ntBASIC0.45□□□□□ -2.34
RAD9AQ99638 Y_RNA.180-201ENST00000363867 113 ntBASIC0.45□□□□□ -2.34
RAD9AQ99638 RNU6-291P-201ENST00000384720 107 ntBASIC0.45□□□□□ -2.34
RAD9AQ99638 RNU6-535P-201ENST00000384722 107 ntBASIC0.45□□□□□ -2.34
RAD9AQ99638 RNU6-1104P-201ENST00000384723 104 ntBASIC0.45□□□□□ -2.34
RAD9AQ99638 MIR644A-201ENST00000385262 94 ntBASIC0.45□□□□□ -2.34
RAD9AQ99638 SNORD77B-201ENST00000391112 67 ntBASIC0.45□□□□□ -2.34
RAD9AQ99638 SNORA31.14-201ENST00000516728 116 ntBASIC0.45□□□□□ -2.34
RAD9AQ99638 AC138749.4-201ENST00000563970 127 ntBASIC0.45□□□□□ -2.34
RAD9AQ99638 MIR4514-201ENST00000581410 57 ntBASIC0.45□□□□□ -2.34
RAD9AQ99638 Y_RNA.464-201ENST00000384282 110 ntBASIC0.44□□□□□ -2.34
RAD9AQ99638 RNU6-1194P-201ENST00000516208 104 ntBASIC0.44□□□□□ -2.34
RAD9AQ99638 Y_RNA.119-201ENST00000363301 96 ntBASIC0.43□□□□□ -2.34
RAD9AQ99638 RNA5SP517-201ENST00000364724 117 ntBASIC0.43□□□□□ -2.34
RAD9AQ99638 Y_RNA.294-201ENST00000364916 102 ntBASIC0.43□□□□□ -2.34
RAD9AQ99638 Y_RNA.488-201ENST00000384403 102 ntBASIC0.43□□□□□ -2.34
RAD9AQ99638 Y_RNA.567-201ENST00000384736 106 ntBASIC0.43□□□□□ -2.34
RAD9AQ99638 IGKV1-22-201ENST00000524313 326 ntBASIC0.43□□□□□ -2.34
RAD9AQ99638 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
RAD9AQ99638 Y_RNA.170-201ENST00000363746 110 ntBASIC0.42□□□□□ -2.34
RAD9AQ99638 RNU6-647P-201ENST00000364243 107 ntBASIC0.42□□□□□ -2.34
RAD9AQ99638 RNY1P2-201ENST00000364820 117 ntBASIC0.42□□□□□ -2.34
RAD9AQ99638 RNU6-1321P-201ENST00000390905 107 ntBASIC0.42□□□□□ -2.34
RAD9AQ99638 RN7SKP19-201ENST00000516016 252 ntBASIC0.42□□□□□ -2.34
RAD9AQ99638 RNA5SP272-201ENST00000516095 111 ntBASIC0.42□□□□□ -2.34
RAD9AQ99638 RNU7-200P-201ENST00000516105 62 ntBASIC0.42□□□□□ -2.34
RAD9AQ99638 AC023932.2-201ENST00000603176 175 ntBASIC0.42□□□□□ -2.34
RAD9AQ99638 U7.2-201ENST00000607576 63 ntBASIC0.42□□□□□ -2.34
RAD9AQ99638 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.42□□□□□ -2.34
RAD9AQ99638 MIR101-2-201ENST00000362195 79 ntBASIC0.41□□□□□ -2.34
RAD9AQ99638 Y_RNA.280-201ENST00000364765 112 ntBASIC0.41□□□□□ -2.34
RAD9AQ99638 MIR206-201ENST00000384872 86 ntBASIC0.41□□□□□ -2.34
RAD9AQ99638 RNA5SP63-201ENST00000391225 112 ntBASIC0.41□□□□□ -2.34
RAD9AQ99638 SNORA40.8-201ENST00000411034 126 ntBASIC0.41□□□□□ -2.34
RAD9AQ99638 SNORD71-201ENST00000411292 86 ntBASIC0.41□□□□□ -2.34
RAD9AQ99638 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
RAD9AQ99638 RNU6-426P-201ENST00000516464 97 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms