Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.17□□□□□ -2.6
CCL13Q99616 MIR624-201ENST00000385217 97 ntBASIC-1.17□□□□□ -2.6
CCL13Q99616 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.17□□□□□ -2.6
CCL13Q99616 RNU6-976P-201ENST00000516086 111 ntBASIC-1.17□□□□□ -2.6
CCL13Q99616 SNORD116-25-201ENST00000516517 92 ntBASIC-1.17□□□□□ -2.6
CCL13Q99616 SNORD38.3-201ENST00000516599 73 ntBASIC-1.17□□□□□ -2.6
CCL13Q99616 AC011603.4-201ENST00000611325 277 ntBASIC-1.17□□□□□ -2.6
CCL13Q99616 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.18□□□□□ -2.6
CCL13Q99616 RNU4-43P-201ENST00000410628 137 ntBASIC-1.18□□□□□ -2.6
CCL13Q99616 AP001362.1-201ENST00000625165 124 ntBASIC-1.18□□□□□ -2.6
CCL13Q99616 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.19□□□□□ -2.6
CCL13Q99616 RNY1P7-201ENST00000384743 110 ntBASIC-1.19□□□□□ -2.6
CCL13Q99616 MIR206-201ENST00000384872 86 ntBASIC-1.19□□□□□ -2.6
CCL13Q99616 MT-TL1-201ENST00000386347 75 ntBASIC-1.19□□□□□ -2.6
CCL13Q99616 MT-TY-201ENST00000387409 66 ntBASIC-1.19□□□□□ -2.6
CCL13Q99616 RNU6-121P-201ENST00000410525 99 ntBASIC-1.19□□□□□ -2.6
CCL13Q99616 AC098614.3-201ENST00000438957 440 ntBASIC-1.19□□□□□ -2.6
CCL13Q99616 AC244090.1-201ENST00000441884 93 ntBASIC-1.19□□□□□ -2.6
CCL13Q99616 MIR2113-201ENST00000459007 91 ntBASIC-1.19□□□□□ -2.6
CCL13Q99616 MIR1270-201ENST00000459320 83 ntBASIC-1.19□□□□□ -2.6
CCL13Q99616 RNU7-106P-201ENST00000459514 67 ntBASIC-1.19□□□□□ -2.6
CCL13Q99616 RNU6-277P-201ENST00000516272 106 ntBASIC-1.19□□□□□ -2.6
CCL13Q99616 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.19□□□□□ -2.6
CCL13Q99616 AP001328.1-201ENST00000528550 176 ntBASIC-1.19□□□□□ -2.6
CCL13Q99616 RNU6-86P-201ENST00000606534 107 ntBASIC-1.19□□□□□ -2.6
CCL13Q99616 RNU4-36P-201ENST00000364294 144 ntBASIC-1.2□□□□□ -2.6
CCL13Q99616 RNU6-978P-201ENST00000364371 103 ntBASIC-1.2□□□□□ -2.6
CCL13Q99616 RNU6-876P-201ENST00000391295 104 ntBASIC-1.2□□□□□ -2.6
CCL13Q99616 AC016907.1-201ENST00000419483 435 ntBASIC-1.2□□□□□ -2.6
CCL13Q99616 AC093783.1-201ENST00000612976 329 ntBASIC-1.2□□□□□ -2.6
CCL13Q99616 RNU6-502P-201ENST00000362419 108 ntBASIC-1.21□□□□□ -2.6
CCL13Q99616 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.21□□□□□ -2.6
CCL13Q99616 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.21□□□□□ -2.6
CCL13Q99616 SNORA51.5-201ENST00000384126 131 ntBASIC-1.21□□□□□ -2.6
CCL13Q99616 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.21□□□□□ -2.6
CCL13Q99616 snoU13.13-201ENST00000458842 104 ntBASIC-1.21□□□□□ -2.6
CCL13Q99616 RNU7-55P-201ENST00000459426 62 ntBASIC-1.21□□□□□ -2.6
CCL13Q99616 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.21□□□□□ -2.6
CCL13Q99616 AC073869.6-201ENST00000640656 341 ntBASIC-1.21□□□□□ -2.6
CCL13Q99616 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.22□□□□□ -2.6
CCL13Q99616 RNU6-571P-201ENST00000384128 107 ntBASIC-1.22□□□□□ -2.6
CCL13Q99616 Z83846.1-201ENST00000446798 265 ntBASIC-1.22□□□□□ -2.6
CCL13Q99616 RNU2-35P-201ENST00000516446 142 ntBASIC-1.22□□□□□ -2.6
CCL13Q99616 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.22□□□□□ -2.6
CCL13Q99616 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.23□□□□□ -2.61
CCL13Q99616 RNU4-69P-201ENST00000410677 143 ntBASIC-1.23□□□□□ -2.61
CCL13Q99616 AL589823.1-201ENST00000429577 183 ntBASIC-1.23□□□□□ -2.61
CCL13Q99616 MIR1302-1-201ENST00000637932 143 ntBASIC-1.23□□□□□ -2.61
CCL13Q99616 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.24□□□□□ -2.61
CCL13Q99616 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.24□□□□□ -2.61
CCL13Q99616 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.24□□□□□ -2.61
CCL13Q99616 RNU6-690P-201ENST00000365242 106 ntBASIC-1.24□□□□□ -2.61
CCL13Q99616 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.24□□□□□ -2.61
CCL13Q99616 MIR652-201ENST00000385278 98 ntBASIC-1.24□□□□□ -2.61
CCL13Q99616 MIR196A1-201ENST00000388006 70 ntBASIC-1.24□□□□□ -2.61
CCL13Q99616 RNU6-381P-201ENST00000391259 108 ntBASIC-1.24□□□□□ -2.61
CCL13Q99616 RNU6-287P-201ENST00000516230 98 ntBASIC-1.24□□□□□ -2.61
CCL13Q99616 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.24□□□□□ -2.61
CCL13Q99616 MIR3179-1-201ENST00000578940 84 ntBASIC-1.24□□□□□ -2.61
CCL13Q99616 MIR3179-2-201ENST00000579107 84 ntBASIC-1.24□□□□□ -2.61
CCL13Q99616 MIR3179-3-201ENST00000579566 84 ntBASIC-1.24□□□□□ -2.61
CCL13Q99616 MIR3179-4-201ENST00000617599 84 ntBASIC-1.24□□□□□ -2.61
CCL13Q99616 MTND5P18-201ENST00000445624 1801 ntBASIC-1.24□□□□□ -2.61
CCL13Q99616 SNORD115-25-201ENST00000362619 82 ntBASIC-1.25□□□□□ -2.61
CCL13Q99616 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.25□□□□□ -2.61
CCL13Q99616 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.25□□□□□ -2.61
CCL13Q99616 MIR518B-201ENST00000385127 83 ntBASIC-1.25□□□□□ -2.61
CCL13Q99616 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.25□□□□□ -2.61
CCL13Q99616 FGF7P6-202ENST00000451282 293 ntBASIC-1.25□□□□□ -2.61
CCL13Q99616 AC007012.1-201ENST00000567192 175 ntBASIC-1.25□□□□□ -2.61
CCL13Q99616 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.26□□□□□ -2.61
CCL13Q99616 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.26□□□□□ -2.61
CCL13Q99616 RNU6-721P-201ENST00000410155 105 ntBASIC-1.26□□□□□ -2.61
CCL13Q99616 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.26□□□□□ -2.61
CCL13Q99616 SNORD19B-201ENST00000459623 84 ntBASIC-1.26□□□□□ -2.61
CCL13Q99616 SERF1AP1-201ENST00000514575 187 ntBASIC-1.26□□□□□ -2.61
CCL13Q99616 SNORA40.17-201ENST00000517256 115 ntBASIC-1.26□□□□□ -2.61
CCL13Q99616 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.26□□□□□ -2.61
CCL13Q99616 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.26□□□□□ -2.61
CCL13Q99616 MIR3681-201ENST00000580089 72 ntBASIC-1.26□□□□□ -2.61
CCL13Q99616 RNU2-4P-201ENST00000606190 192 ntBASIC-1.26□□□□□ -2.61
CCL13Q99616 AC145423.2-201ENST00000610631 239 ntBASIC-1.26□□□□□ -2.61
CCL13Q99616 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.26□□□□□ -2.61
CCL13Q99616 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.27□□□□□ -2.61
CCL13Q99616 SNORD83B-201ENST00000386745 93 ntBASIC-1.27□□□□□ -2.61
CCL13Q99616 RNU7-2P-201ENST00000516096 62 ntBASIC-1.27□□□□□ -2.61
CCL13Q99616 SNORA40.15-201ENST00000516884 107 ntBASIC-1.27□□□□□ -2.61
CCL13Q99616 RNU6-850P-201ENST00000516934 103 ntBASIC-1.27□□□□□ -2.61
CCL13Q99616 AC009779.6-201ENST00000603972 165 ntBASIC-1.27□□□□□ -2.61
CCL13Q99616 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.28□□□□□ -2.61
CCL13Q99616 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.28□□□□□ -2.61
CCL13Q99616 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.28□□□□□ -2.61
CCL13Q99616 RNU6-472P-201ENST00000384299 107 ntBASIC-1.28□□□□□ -2.61
CCL13Q99616 MIR516A2-201ENST00000384888 90 ntBASIC-1.28□□□□□ -2.61
CCL13Q99616 MIR516A1-201ENST00000385033 90 ntBASIC-1.28□□□□□ -2.61
CCL13Q99616 SNORA49-201ENST00000386157 136 ntBASIC-1.28□□□□□ -2.61
CCL13Q99616 SNORD77B-201ENST00000391112 67 ntBASIC-1.28□□□□□ -2.61
CCL13Q99616 MIR1252-201ENST00000408861 65 ntBASIC-1.28□□□□□ -2.61
CCL13Q99616 AL121914.1-201ENST00000450188 156 ntBASIC-1.28□□□□□ -2.61
CCL13Q99616 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms