Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 MIR1236-201ENST00000408340 102 ntBASIC2.36□□□□□ -2.03
CCDC85AQ96PX6 SNORA44.1-201ENST00000517031 108 ntBASIC2.36□□□□□ -2.03
CCDC85AQ96PX6 AP003716.2-201ENST00000528260 108 ntBASIC2.36□□□□□ -2.03
CCDC85AQ96PX6 MIR4662A-201ENST00000637499 67 ntBASIC2.36□□□□□ -2.03
CCDC85AQ96PX6 MIR9-3-201ENST00000385084 90 ntBASIC2.35□□□□□ -2.03
CCDC85AQ96PX6 RNU6-205P-201ENST00000390858 107 ntBASIC2.35□□□□□ -2.03
CCDC85AQ96PX6 MIR8063-201ENST00000621930 81 ntBASIC2.35□□□□□ -2.03
CCDC85AQ96PX6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC85AQ96PX6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.35□□□□□ -2.03
CCDC85AQ96PX6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CCDC85AQ96PX6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC85AQ96PX6 MIR103A2-201ENST00000362154 78 ntBASIC2.34□□□□□ -2.03
CCDC85AQ96PX6 RNU6-53P-201ENST00000365367 106 ntBASIC2.34□□□□□ -2.03
CCDC85AQ96PX6 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CCDC85AQ96PX6 SNORA17.3-201ENST00000391159 129 ntBASIC2.34□□□□□ -2.03
CCDC85AQ96PX6 snoU13.9-201ENST00000458927 103 ntBASIC2.34□□□□□ -2.03
CCDC85AQ96PX6 RNA5SP458-201ENST00000516188 119 ntBASIC2.34□□□□□ -2.03
CCDC85AQ96PX6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.34□□□□□ -2.03
CCDC85AQ96PX6 MIR6516-201ENST00000630554 81 ntBASIC2.34□□□□□ -2.03
CCDC85AQ96PX6 RNA5SP264-201ENST00000363115 107 ntBASIC2.33□□□□□ -2.04
CCDC85AQ96PX6 Y_RNA.221-201ENST00000364248 96 ntBASIC2.33□□□□□ -2.04
CCDC85AQ96PX6 AC087499.7-201ENST00000441958 109 ntBASIC2.33□□□□□ -2.04
CCDC85AQ96PX6 Y_RNA.648-201ENST00000459455 110 ntBASIC2.33□□□□□ -2.04
CCDC85AQ96PX6 RNA5SP182-201ENST00000516064 82 ntBASIC2.33□□□□□ -2.04
CCDC85AQ96PX6 AC080100.1-201ENST00000624239 5356 ntBASIC2.33□□□□□ -2.04
CCDC85AQ96PX6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC85AQ96PX6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CCDC85AQ96PX6 RNU6-1065P-201ENST00000384513 106 ntBASIC2.32□□□□□ -2.04
CCDC85AQ96PX6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.32□□□□□ -2.04
CCDC85AQ96PX6 RNU4-83P-201ENST00000410863 133 ntBASIC2.32□□□□□ -2.04
CCDC85AQ96PX6 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC85AQ96PX6 MIR18B-201ENST00000454574 71 ntBASIC2.32□□□□□ -2.04
CCDC85AQ96PX6 RNU6-717P-201ENST00000459076 104 ntBASIC2.32□□□□□ -2.04
CCDC85AQ96PX6 SNORD4B-201ENST00000459083 72 ntBASIC2.32□□□□□ -2.04
CCDC85AQ96PX6 AC025033.1-201ENST00000463883 194 ntBASIC2.32□□□□□ -2.04
CCDC85AQ96PX6 AC084768.2-201ENST00000622736 221 ntBASIC2.32□□□□□ -2.04
CCDC85AQ96PX6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC85AQ96PX6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC85AQ96PX6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC85AQ96PX6 MIR30A-201ENST00000385092 71 ntBASIC2.31□□□□□ -2.04
CCDC85AQ96PX6 MIR1185-1-201ENST00000408598 86 ntBASIC2.31□□□□□ -2.04
CCDC85AQ96PX6 snoU13.25-201ENST00000458945 104 ntBASIC2.31□□□□□ -2.04
CCDC85AQ96PX6 SNORD13-201ENST00000459299 104 ntBASIC2.31□□□□□ -2.04
CCDC85AQ96PX6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC85AQ96PX6 AC140658.3-201ENST00000567603 271 ntBASIC2.31□□□□□ -2.04
CCDC85AQ96PX6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.31□□□□□ -2.04
CCDC85AQ96PX6 RNU4-58P-201ENST00000363192 141 ntBASIC2.3□□□□□ -2.04
CCDC85AQ96PX6 RNU6-580P-201ENST00000365159 107 ntBASIC2.3□□□□□ -2.04
CCDC85AQ96PX6 BX276092.1-201ENST00000427368 251 ntBASIC2.3□□□□□ -2.04
CCDC85AQ96PX6 AC245517.4-201ENST00000448601 281 ntBASIC2.3□□□□□ -2.04
CCDC85AQ96PX6 MIR4448-201ENST00000584360 86 ntBASIC2.3□□□□□ -2.04
CCDC85AQ96PX6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC85AQ96PX6 SNORA72.6-201ENST00000384520 129 ntBASIC2.29□□□□□ -2.04
CCDC85AQ96PX6 RNA5SP338-201ENST00000410495 85 ntBASIC2.29□□□□□ -2.04
CCDC85AQ96PX6 AC079140.2-201ENST00000506193 142 ntBASIC2.29□□□□□ -2.04
CCDC85AQ96PX6 ZNF355P-201ENST00000427301 3216 ntBASIC2.29□□□□□ -2.04
CCDC85AQ96PX6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC85AQ96PX6 MIR302D-201ENST00000362275 68 ntBASIC2.28□□□□□ -2.04
CCDC85AQ96PX6 RNA5SP190-201ENST00000365222 118 ntBASIC2.28□□□□□ -2.04
CCDC85AQ96PX6 AC108667.1-201ENST00000428618 249 ntBASIC2.28□□□□□ -2.04
CCDC85AQ96PX6 RNU1-40P-201ENST00000516816 164 ntBASIC2.28□□□□□ -2.04
CCDC85AQ96PX6 RNU1-97P-201ENST00000516872 164 ntBASIC2.28□□□□□ -2.04
CCDC85AQ96PX6 AC103810.8-201ENST00000607347 118 ntBASIC2.28□□□□□ -2.04
CCDC85AQ96PX6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CCDC85AQ96PX6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CCDC85AQ96PX6 SNORD1A-201ENST00000364968 72 ntBASIC2.27□□□□□ -2.05
CCDC85AQ96PX6 RNU6-1254P-201ENST00000391266 104 ntBASIC2.27□□□□□ -2.05
CCDC85AQ96PX6 SNORA25.15-201ENST00000516487 89 ntBASIC2.27□□□□□ -2.05
CCDC85AQ96PX6 Y_RNA.94-201ENST00000363068 106 ntBASIC2.26□□□□□ -2.05
CCDC85AQ96PX6 RNU4-32P-201ENST00000363404 141 ntBASIC2.26□□□□□ -2.05
CCDC85AQ96PX6 RNU6-243P-201ENST00000391140 107 ntBASIC2.26□□□□□ -2.05
CCDC85AQ96PX6 SNORD93-201ENST00000408813 74 ntBASIC2.26□□□□□ -2.05
CCDC85AQ96PX6 RNU6-1194P-201ENST00000516208 104 ntBASIC2.26□□□□□ -2.05
CCDC85AQ96PX6 MIR4491-201ENST00000581087 68 ntBASIC2.26□□□□□ -2.05
CCDC85AQ96PX6 MIR4712-201ENST00000583750 82 ntBASIC2.26□□□□□ -2.05
CCDC85AQ96PX6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CCDC85AQ96PX6 RNU6-315P-201ENST00000362666 107 ntBASIC2.25□□□□□ -2.05
CCDC85AQ96PX6 RNU6-776P-201ENST00000364403 104 ntBASIC2.25□□□□□ -2.05
CCDC85AQ96PX6 RNU6-1022P-201ENST00000365049 104 ntBASIC2.25□□□□□ -2.05
CCDC85AQ96PX6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.25□□□□□ -2.05
CCDC85AQ96PX6 MIR3937-201ENST00000580135 106 ntBASIC2.25□□□□□ -2.05
CCDC85AQ96PX6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC85AQ96PX6 RNU7-85P-201ENST00000458851 63 ntBASIC2.24□□□□□ -2.05
CCDC85AQ96PX6 SNORA25.13-201ENST00000516395 103 ntBASIC2.24□□□□□ -2.05
CCDC85AQ96PX6 MIR3664-201ENST00000579074 99 ntBASIC2.24□□□□□ -2.05
CCDC85AQ96PX6 uc_338.6-201ENST00000613544 171 ntBASIC2.24□□□□□ -2.05
CCDC85AQ96PX6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC85AQ96PX6 SNORD36A-201ENST00000362874 73 ntBASIC2.23□□□□□ -2.05
CCDC85AQ96PX6 RNU6-654P-201ENST00000364373 107 ntBASIC2.23□□□□□ -2.05
CCDC85AQ96PX6 RNU1-36P-201ENST00000365130 165 ntBASIC2.23□□□□□ -2.05
CCDC85AQ96PX6 RNU6-65P-201ENST00000516332 98 ntBASIC2.23□□□□□ -2.05
CCDC85AQ96PX6 RNU6-531P-201ENST00000516694 104 ntBASIC2.23□□□□□ -2.05
CCDC85AQ96PX6 AC019176.1-201ENST00000518519 225 ntBASIC2.23□□□□□ -2.05
CCDC85AQ96PX6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC85AQ96PX6 MIR4536-1-201ENST00000583537 88 ntBASIC2.23□□□□□ -2.05
CCDC85AQ96PX6 RNU7-10P-201ENST00000607194 63 ntBASIC2.23□□□□□ -2.05
CCDC85AQ96PX6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC85AQ96PX6 Y_RNA.338-201ENST00000365320 114 ntBASIC2.22□□□□□ -2.05
CCDC85AQ96PX6 Y_RNA.508-201ENST00000384502 114 ntBASIC2.22□□□□□ -2.05
CCDC85AQ96PX6 MIR516A2-201ENST00000384888 90 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms