Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 MIR1276-201ENST00000408707 83 ntBASIC1.66□□□□□ -2.14
FGD4Q96M96 RNA5SP95-201ENST00000410319 137 ntBASIC1.66□□□□□ -2.14
FGD4Q96M96 MIR4439-201ENST00000583746 80 ntBASIC1.66□□□□□ -2.14
FGD4Q96M96 uc_338.6-201ENST00000613544 171 ntBASIC1.66□□□□□ -2.14
FGD4Q96M96 AC012676.2-201ENST00000619258 186 ntBASIC1.66□□□□□ -2.14
FGD4Q96M96 AP001362.1-201ENST00000625165 124 ntBASIC1.66□□□□□ -2.14
FGD4Q96M96 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
FGD4Q96M96 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
FGD4Q96M96 SNORD113.3-201ENST00000364630 78 ntBASIC1.65□□□□□ -2.15
FGD4Q96M96 RNU6-53P-201ENST00000365367 106 ntBASIC1.65□□□□□ -2.15
FGD4Q96M96 AL591704.2-201ENST00000421658 181 ntBASIC1.65□□□□□ -2.15
FGD4Q96M96 MIR7111-201ENST00000619751 72 ntBASIC1.65□□□□□ -2.15
FGD4Q96M96 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.65□□□□□ -2.15
FGD4Q96M96 RNU6-170P-201ENST00000362832 104 ntBASIC1.64□□□□□ -2.15
FGD4Q96M96 SNORA25.9-201ENST00000365087 128 ntBASIC1.64□□□□□ -2.15
FGD4Q96M96 SNORA80D-201ENST00000384488 135 ntBASIC1.64□□□□□ -2.15
FGD4Q96M96 SNORA2B-201ENST00000384583 137 ntBASIC1.64□□□□□ -2.15
FGD4Q96M96 U8.15-201ENST00000390947 134 ntBASIC1.64□□□□□ -2.15
FGD4Q96M96 RPS29P28-201ENST00000446439 141 ntBASIC1.64□□□□□ -2.15
FGD4Q96M96 RNU7-21P-201ENST00000459430 62 ntBASIC1.64□□□□□ -2.15
FGD4Q96M96 AC036111.3-201ENST00000526389 112 ntBASIC1.64□□□□□ -2.15
FGD4Q96M96 Y_RNA.95-201ENST00000363079 95 ntBASIC1.63□□□□□ -2.15
FGD4Q96M96 SNORD38.2-201ENST00000384470 69 ntBASIC1.63□□□□□ -2.15
FGD4Q96M96 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.63□□□□□ -2.15
FGD4Q96M96 MIR1304-201ENST00000408243 91 ntBASIC1.63□□□□□ -2.15
FGD4Q96M96 AC004941.2-201ENST00000427009 228 ntBASIC1.63□□□□□ -2.15
FGD4Q96M96 AL161722.3-201ENST00000605789 2983 ntBASIC1.63□□□□□ -2.15
FGD4Q96M96 Y_RNA.96-201ENST00000363092 109 ntBASIC1.62□□□□□ -2.15
FGD4Q96M96 Y_RNA.247-201ENST00000364500 92 ntBASIC1.62□□□□□ -2.15
FGD4Q96M96 Y_RNA.330-201ENST00000365230 109 ntBASIC1.62□□□□□ -2.15
FGD4Q96M96 RNU6-910P-201ENST00000390844 107 ntBASIC1.62□□□□□ -2.15
FGD4Q96M96 SNORD111-201ENST00000408139 94 ntBASIC1.62□□□□□ -2.15
FGD4Q96M96 MRPL35P3-201ENST00000421557 364 ntBASIC1.62□□□□□ -2.15
FGD4Q96M96 SNORD79.1-201ENST00000516069 84 ntBASIC1.62□□□□□ -2.15
FGD4Q96M96 AC012531.4-201ENST00000616509 177 ntBASIC1.62□□□□□ -2.15
FGD4Q96M96 AC008163.1-202ENST00000636004 2889 ntBASIC1.62□□□□□ -2.15
FGD4Q96M96 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
FGD4Q96M96 MIR320A-201ENST00000385302 82 ntBASIC1.61□□□□□ -2.15
FGD4Q96M96 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
FGD4Q96M96 Y_RNA.659-201ENST00000515994 113 ntBASIC1.61□□□□□ -2.15
FGD4Q96M96 RNU1-92P-201ENST00000517017 135 ntBASIC1.61□□□□□ -2.15
FGD4Q96M96 AC138749.4-201ENST00000563970 127 ntBASIC1.61□□□□□ -2.15
FGD4Q96M96 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.61□□□□□ -2.15
FGD4Q96M96 AC106800.4-201ENST00000614905 153 ntBASIC1.61□□□□□ -2.15
FGD4Q96M96 HSBP1P2-201ENST00000299671 229 ntBASIC1.6□□□□□ -2.15
FGD4Q96M96 RNU6-1255P-201ENST00000363434 112 ntBASIC1.6□□□□□ -2.15
FGD4Q96M96 Y_RNA.369-201ENST00000365568 117 ntBASIC1.6□□□□□ -2.15
FGD4Q96M96 SNORD12-201ENST00000391002 90 ntBASIC1.6□□□□□ -2.15
FGD4Q96M96 RNU6-795P-201ENST00000516323 103 ntBASIC1.6□□□□□ -2.15
FGD4Q96M96 MIR5582-201ENST00000579697 68 ntBASIC1.6□□□□□ -2.15
FGD4Q96M96 MIR4777-201ENST00000583710 86 ntBASIC1.6□□□□□ -2.15
FGD4Q96M96 AL353770.2-201ENST00000620024 78 ntBASIC1.6□□□□□ -2.15
FGD4Q96M96 AC091304.10-201ENST00000641554 121 ntBASIC1.6□□□□□ -2.15
FGD4Q96M96 MIR548G-201ENST00000408442 89 ntBASIC1.59□□□□□ -2.15
FGD4Q96M96 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.59□□□□□ -2.15
FGD4Q96M96 RNU1-123P-201ENST00000458950 160 ntBASIC1.59□□□□□ -2.15
FGD4Q96M96 RNU7-90P-201ENST00000459216 62 ntBASIC1.59□□□□□ -2.15
FGD4Q96M96 RNU6-90P-201ENST00000606352 106 ntBASIC1.59□□□□□ -2.15
FGD4Q96M96 AL157834.3-201ENST00000615543 103 ntBASIC1.59□□□□□ -2.15
FGD4Q96M96 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.59□□□□□ -2.15
FGD4Q96M96 RNU1-36P-201ENST00000365130 165 ntBASIC1.58□□□□□ -2.16
FGD4Q96M96 Y_RNA.355-201ENST00000365462 98 ntBASIC1.58□□□□□ -2.16
FGD4Q96M96 RNY4P30-201ENST00000410216 95 ntBASIC1.58□□□□□ -2.16
FGD4Q96M96 AC004223.1-201ENST00000479840 271 ntBASIC1.58□□□□□ -2.16
FGD4Q96M96 SNORA70.22-201ENST00000517160 124 ntBASIC1.58□□□□□ -2.16
FGD4Q96M96 RNU6-1163P-201ENST00000364516 107 ntBASIC1.57□□□□□ -2.16
FGD4Q96M96 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.57□□□□□ -2.16
FGD4Q96M96 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.57□□□□□ -2.16
FGD4Q96M96 MIR3660-201ENST00000584845 100 ntBASIC1.57□□□□□ -2.16
FGD4Q96M96 U6.109-201ENST00000636749 87 ntBASIC1.57□□□□□ -2.16
FGD4Q96M96 RNA5SP133-201ENST00000363368 119 ntBASIC1.56□□□□□ -2.16
FGD4Q96M96 RNU6-934P-201ENST00000365154 107 ntBASIC1.56□□□□□ -2.16
FGD4Q96M96 Y_RNA.342-201ENST00000365352 113 ntBASIC1.56□□□□□ -2.16
FGD4Q96M96 Y_RNA.508-201ENST00000384502 114 ntBASIC1.56□□□□□ -2.16
FGD4Q96M96 Y_RNA.588-201ENST00000391254 102 ntBASIC1.56□□□□□ -2.16
FGD4Q96M96 SNORD93-201ENST00000408813 74 ntBASIC1.56□□□□□ -2.16
FGD4Q96M96 RNU6-955P-201ENST00000410497 104 ntBASIC1.56□□□□□ -2.16
FGD4Q96M96 AC109327.2-201ENST00000448339 378 ntBASIC1.56□□□□□ -2.16
FGD4Q96M96 RNU7-185P-201ENST00000459215 60 ntBASIC1.56□□□□□ -2.16
FGD4Q96M96 snoU13.21-201ENST00000459368 105 ntBASIC1.56□□□□□ -2.16
FGD4Q96M96 Y_RNA.705-201ENST00000516862 110 ntBASIC1.56□□□□□ -2.16
FGD4Q96M96 RNA5SP102-201ENST00000516865 106 ntBASIC1.56□□□□□ -2.16
FGD4Q96M96 MIR4491-201ENST00000581087 68 ntBASIC1.56□□□□□ -2.16
FGD4Q96M96 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.56□□□□□ -2.16
FGD4Q96M96 MIR6504-201ENST00000613520 61 ntBASIC1.56□□□□□ -2.16
FGD4Q96M96 Y_RNA.119-201ENST00000363301 96 ntBASIC1.55□□□□□ -2.16
FGD4Q96M96 Y_RNA.173-201ENST00000363776 113 ntBASIC1.55□□□□□ -2.16
FGD4Q96M96 MIR488-201ENST00000365739 83 ntBASIC1.55□□□□□ -2.16
FGD4Q96M96 RNU6-813P-201ENST00000384691 107 ntBASIC1.55□□□□□ -2.16
FGD4Q96M96 RNU6-644P-201ENST00000391155 98 ntBASIC1.55□□□□□ -2.16
FGD4Q96M96 RNU7-61P-201ENST00000515897 61 ntBASIC1.55□□□□□ -2.16
FGD4Q96M96 MIR548Z-201ENST00000584743 97 ntBASIC1.55□□□□□ -2.16
FGD4Q96M96 MALAT1.1-201ENST00000618249 95 ntBASIC1.55□□□□□ -2.16
FGD4Q96M96 AC023934.1-201ENST00000574529 2389 ntBASIC1.54□□□□□ -2.16
FGD4Q96M96 MIR96-201ENST00000362288 78 ntBASIC1.54□□□□□ -2.16
FGD4Q96M96 Y_RNA.220-201ENST00000364244 109 ntBASIC1.54□□□□□ -2.16
FGD4Q96M96 Y_RNA.467-201ENST00000384297 102 ntBASIC1.54□□□□□ -2.16
FGD4Q96M96 Y_RNA.567-201ENST00000384736 106 ntBASIC1.54□□□□□ -2.16
FGD4Q96M96 RNU6-972P-201ENST00000391208 107 ntBASIC1.54□□□□□ -2.16
FGD4Q96M96 MIR1257-201ENST00000408490 117 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms