Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 RNU6-53P-201ENST00000365367 106 ntBASIC1.56□□□□□ -2.16
SHDQ96IW2 MIR605-201ENST00000385078 83 ntBASIC1.56□□□□□ -2.16
SHDQ96IW2 U8.15-201ENST00000390947 134 ntBASIC1.56□□□□□ -2.16
SHDQ96IW2 RNA5SP102-201ENST00000516865 106 ntBASIC1.56□□□□□ -2.16
SHDQ96IW2 DEFB131E-201ENST00000532329 154 ntBASIC1.56□□□□□ -2.16
SHDQ96IW2 uc_338.6-201ENST00000613544 171 ntBASIC1.56□□□□□ -2.16
SHDQ96IW2 RNY1P2-201ENST00000364820 117 ntBASIC1.55□□□□□ -2.16
SHDQ96IW2 SNORD83.1-201ENST00000411362 77 ntBASIC1.55□□□□□ -2.16
SHDQ96IW2 RPS29P28-201ENST00000446439 141 ntBASIC1.55□□□□□ -2.16
SHDQ96IW2 MIR6078-201ENST00000611069 100 ntBASIC1.55□□□□□ -2.16
SHDQ96IW2 MIR6734-201ENST00000621166 68 ntBASIC1.55□□□□□ -2.16
SHDQ96IW2 SNORA25.8-201ENST00000364831 128 ntBASIC1.54□□□□□ -2.16
SHDQ96IW2 Y_RNA.377-201ENST00000365644 108 ntBASIC1.54□□□□□ -2.16
SHDQ96IW2 AC002429.1-201ENST00000437672 148 ntBASIC1.54□□□□□ -2.16
SHDQ96IW2 RNU7-185P-201ENST00000459215 60 ntBASIC1.54□□□□□ -2.16
SHDQ96IW2 MIR4771-2-201ENST00000577758 74 ntBASIC1.54□□□□□ -2.16
SHDQ96IW2 MIR4771-1-201ENST00000582617 74 ntBASIC1.54□□□□□ -2.16
SHDQ96IW2 AL442128.1-201ENST00000615151 90 ntBASIC1.54□□□□□ -2.16
SHDQ96IW2 MIR450A1-201ENST00000362262 91 ntBASIC1.53□□□□□ -2.16
SHDQ96IW2 RNU6-832P-201ENST00000363319 107 ntBASIC1.53□□□□□ -2.16
SHDQ96IW2 SNORD48-201ENST00000364953 64 ntBASIC1.53□□□□□ -2.16
SHDQ96IW2 RNU1-36P-201ENST00000365130 165 ntBASIC1.53□□□□□ -2.16
SHDQ96IW2 RNU6-147P-201ENST00000383983 107 ntBASIC1.53□□□□□ -2.16
SHDQ96IW2 RNU6-1201P-201ENST00000384227 107 ntBASIC1.53□□□□□ -2.16
SHDQ96IW2 RPS26P5-201ENST00000418544 335 ntBASIC1.53□□□□□ -2.16
SHDQ96IW2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.53□□□□□ -2.16
SHDQ96IW2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
SHDQ96IW2 RNU6-1099P-201ENST00000363533 107 ntBASIC1.52□□□□□ -2.17
SHDQ96IW2 RNU6-32P-201ENST00000383948 107 ntBASIC1.52□□□□□ -2.17
SHDQ96IW2 RNU6-13P-201ENST00000384248 107 ntBASIC1.52□□□□□ -2.17
SHDQ96IW2 RNU6-12P-201ENST00000384604 107 ntBASIC1.52□□□□□ -2.17
SHDQ96IW2 Y_RNA.544-201ENST00000384650 113 ntBASIC1.52□□□□□ -2.17
SHDQ96IW2 RNU6-41P-201ENST00000384741 107 ntBASIC1.52□□□□□ -2.17
SHDQ96IW2 MIR577-201ENST00000385196 96 ntBASIC1.52□□□□□ -2.17
SHDQ96IW2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.52□□□□□ -2.17
SHDQ96IW2 snoU13.21-201ENST00000459368 105 ntBASIC1.52□□□□□ -2.17
SHDQ96IW2 AC019288.1-201ENST00000557918 224 ntBASIC1.52□□□□□ -2.17
SHDQ96IW2 AC027335.2-201ENST00000624030 375 ntBASIC1.52□□□□□ -2.17
SHDQ96IW2 U6.109-201ENST00000636749 87 ntBASIC1.52□□□□□ -2.17
SHDQ96IW2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
SHDQ96IW2 MIR1-1-201ENST00000362147 71 ntBASIC1.51□□□□□ -2.17
SHDQ96IW2 RNA5SP133-201ENST00000363368 119 ntBASIC1.51□□□□□ -2.17
SHDQ96IW2 SNORD38.1-201ENST00000363863 68 ntBASIC1.51□□□□□ -2.17
SHDQ96IW2 MIR1323-201ENST00000408090 73 ntBASIC1.51□□□□□ -2.17
SHDQ96IW2 RNU4-83P-201ENST00000410863 133 ntBASIC1.51□□□□□ -2.17
SHDQ96IW2 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
SHDQ96IW2 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.51□□□□□ -2.17
SHDQ96IW2 MIR376B-201ENST00000614515 100 ntBASIC1.51□□□□□ -2.17
SHDQ96IW2 Y_RNA.818-201ENST00000618813 71 ntBASIC1.51□□□□□ -2.17
SHDQ96IW2 RNU6-403P-201ENST00000363163 104 ntBASIC1.5□□□□□ -2.17
SHDQ96IW2 SNORD45B-201ENST00000364617 72 ntBASIC1.5□□□□□ -2.17
SHDQ96IW2 MIR34C-201ENST00000384831 77 ntBASIC1.5□□□□□ -2.17
SHDQ96IW2 MIR100-201ENST00000385259 80 ntBASIC1.5□□□□□ -2.17
SHDQ96IW2 Y_RNA.601-201ENST00000410500 113 ntBASIC1.5□□□□□ -2.17
SHDQ96IW2 AL353813.1-201ENST00000440700 253 ntBASIC1.5□□□□□ -2.17
SHDQ96IW2 RNU7-40P-201ENST00000516397 64 ntBASIC1.5□□□□□ -2.17
SHDQ96IW2 AL136317.1-201ENST00000612653 226 ntBASIC1.5□□□□□ -2.17
SHDQ96IW2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
SHDQ96IW2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SHDQ96IW2 SNORA72.6-201ENST00000384520 129 ntBASIC1.49□□□□□ -2.17
SHDQ96IW2 MIR7-2-201ENST00000384970 110 ntBASIC1.49□□□□□ -2.17
SHDQ96IW2 MIR125B2-201ENST00000385128 89 ntBASIC1.49□□□□□ -2.17
SHDQ96IW2 RNU6-1307P-201ENST00000391012 103 ntBASIC1.49□□□□□ -2.17
SHDQ96IW2 MIR1304-201ENST00000408243 91 ntBASIC1.49□□□□□ -2.17
SHDQ96IW2 FABP5P4-201ENST00000437203 171 ntBASIC1.49□□□□□ -2.17
SHDQ96IW2 RNU6-904P-201ENST00000516206 101 ntBASIC1.49□□□□□ -2.17
SHDQ96IW2 AC138749.4-201ENST00000563970 127 ntBASIC1.49□□□□□ -2.17
SHDQ96IW2 MIR4491-201ENST00000581087 68 ntBASIC1.49□□□□□ -2.17
SHDQ96IW2 RMST_2.1-201ENST00000617263 136 ntBASIC1.49□□□□□ -2.17
SHDQ96IW2 MIR26B-201ENST00000362251 77 ntBASIC1.48□□□□□ -2.17
SHDQ96IW2 RNU4-58P-201ENST00000363192 141 ntBASIC1.48□□□□□ -2.17
SHDQ96IW2 SNORD114-22-201ENST00000365423 72 ntBASIC1.48□□□□□ -2.17
SHDQ96IW2 MIR19B1-201ENST00000384829 87 ntBASIC1.48□□□□□ -2.17
SHDQ96IW2 AC004941.2-201ENST00000427009 228 ntBASIC1.48□□□□□ -2.17
SHDQ96IW2 Y_RNA.659-201ENST00000515994 113 ntBASIC1.48□□□□□ -2.17
SHDQ96IW2 SCARNA23-201ENST00000516060 130 ntBASIC1.48□□□□□ -2.17
SHDQ96IW2 RNU6-977P-201ENST00000516411 103 ntBASIC1.48□□□□□ -2.17
SHDQ96IW2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SHDQ96IW2 Y_RNA.119-201ENST00000363301 96 ntBASIC1.47□□□□□ -2.17
SHDQ96IW2 RNU6-364P-201ENST00000384387 107 ntBASIC1.47□□□□□ -2.17
SHDQ96IW2 MIR200A-201ENST00000384875 90 ntBASIC1.47□□□□□ -2.17
SHDQ96IW2 AC023790.1-201ENST00000482174 347 ntBASIC1.47□□□□□ -2.17
SHDQ96IW2 UBL5P1-201ENST00000507979 193 ntBASIC1.47□□□□□ -2.17
SHDQ96IW2 MTND5P40-201ENST00000559945 246 ntBASIC1.47□□□□□ -2.17
SHDQ96IW2 MIR3613-201ENST00000579844 87 ntBASIC1.47□□□□□ -2.17
SHDQ96IW2 MIR4676-201ENST00000583078 72 ntBASIC1.47□□□□□ -2.17
SHDQ96IW2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.47□□□□□ -2.17
SHDQ96IW2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SHDQ96IW2 Y_RNA.495-201ENST00000384435 112 ntBASIC1.46□□□□□ -2.18
SHDQ96IW2 MIR590-201ENST00000385008 97 ntBASIC1.46□□□□□ -2.18
SHDQ96IW2 MIR938-201ENST00000401216 83 ntBASIC1.46□□□□□ -2.18
SHDQ96IW2 RNU6-90P-201ENST00000606352 106 ntBASIC1.46□□□□□ -2.18
SHDQ96IW2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SHDQ96IW2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.45□□□□□ -2.18
SHDQ96IW2 Y_RNA.96-201ENST00000363092 109 ntBASIC1.45□□□□□ -2.18
SHDQ96IW2 RNA5SP363-201ENST00000365072 115 ntBASIC1.45□□□□□ -2.18
SHDQ96IW2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
SHDQ96IW2 Y_RNA.588-201ENST00000391254 102 ntBASIC1.45□□□□□ -2.18
SHDQ96IW2 SNORA19.1-201ENST00000410656 129 ntBASIC1.45□□□□□ -2.18
SHDQ96IW2 AC096949.1-201ENST00000412047 152 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms