Protein–RNA interactions for Protein: Q96HJ3

CCDC34, Coiled-coil domain-containing protein 34, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC34Q96HJ3 RNU6-682P-201ENST00000363843 106 ntBASIC0.37□□□□□ -2.35
CCDC34Q96HJ3 RNU6-151P-201ENST00000364158 107 ntBASIC0.37□□□□□ -2.35
CCDC34Q96HJ3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.37□□□□□ -2.35
CCDC34Q96HJ3 SNORA62.5-201ENST00000516634 120 ntBASIC0.37□□□□□ -2.35
CCDC34Q96HJ3 SNORA81.3-201ENST00000517283 198 ntBASIC0.37□□□□□ -2.35
CCDC34Q96HJ3 AC112693.2-201ENST00000556538 232 ntBASIC0.37□□□□□ -2.35
CCDC34Q96HJ3 AC022523.2-201ENST00000561045 150 ntBASIC0.37□□□□□ -2.35
CCDC34Q96HJ3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.37□□□□□ -2.35
CCDC34Q96HJ3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.36□□□□□ -2.35
CCDC34Q96HJ3 Y_RNA.29-201ENST00000362570 113 ntBASIC0.36□□□□□ -2.35
CCDC34Q96HJ3 Y_RNA.272-201ENST00000364696 102 ntBASIC0.36□□□□□ -2.35
CCDC34Q96HJ3 SNRPGP12-201ENST00000449481 213 ntBASIC0.36□□□□□ -2.35
CCDC34Q96HJ3 Y_RNA.651-201ENST00000459380 103 ntBASIC0.36□□□□□ -2.35
CCDC34Q96HJ3 RNA5SP227-201ENST00000516184 113 ntBASIC0.36□□□□□ -2.35
CCDC34Q96HJ3 RNU7-137P-201ENST00000516788 62 ntBASIC0.36□□□□□ -2.35
CCDC34Q96HJ3 MIR3646-201ENST00000578301 84 ntBASIC0.36□□□□□ -2.35
CCDC34Q96HJ3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.36□□□□□ -2.35
CCDC34Q96HJ3 RNA5SP257-201ENST00000363023 116 ntBASIC0.35□□□□□ -2.35
CCDC34Q96HJ3 RNU4-58P-201ENST00000363192 141 ntBASIC0.35□□□□□ -2.35
CCDC34Q96HJ3 RNA5SP62-201ENST00000363457 110 ntBASIC0.35□□□□□ -2.35
CCDC34Q96HJ3 RNA5SP245-201ENST00000364239 121 ntBASIC0.35□□□□□ -2.35
CCDC34Q96HJ3 Y_RNA.240-201ENST00000364469 95 ntBASIC0.35□□□□□ -2.35
CCDC34Q96HJ3 SNORD116-18-201ENST00000383961 92 ntBASIC0.35□□□□□ -2.35
CCDC34Q96HJ3 RNU6-460P-201ENST00000391158 108 ntBASIC0.35□□□□□ -2.35
CCDC34Q96HJ3 RNU7-120P-201ENST00000459334 63 ntBASIC0.35□□□□□ -2.35
CCDC34Q96HJ3 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
CCDC34Q96HJ3 RNA5SP268-201ENST00000516828 124 ntBASIC0.35□□□□□ -2.35
CCDC34Q96HJ3 RNU6-765P-201ENST00000516916 99 ntBASIC0.35□□□□□ -2.35
CCDC34Q96HJ3 Y_RNA.119-201ENST00000363301 96 ntBASIC0.34□□□□□ -2.36
CCDC34Q96HJ3 RNU6-1130P-201ENST00000365434 107 ntBASIC0.34□□□□□ -2.36
CCDC34Q96HJ3 AC138749.4-201ENST00000563970 127 ntBASIC0.34□□□□□ -2.36
CCDC34Q96HJ3 AC108081.1-201ENST00000604358 221 ntBASIC0.34□□□□□ -2.36
CCDC34Q96HJ3 AC011603.4-201ENST00000611325 277 ntBASIC0.34□□□□□ -2.36
CCDC34Q96HJ3 AC004792.1-201ENST00000614523 137 ntBASIC0.34□□□□□ -2.36
CCDC34Q96HJ3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
CCDC34Q96HJ3 Y_RNA.49-201ENST00000362714 112 ntBASIC0.33□□□□□ -2.36
CCDC34Q96HJ3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.33□□□□□ -2.36
CCDC34Q96HJ3 Y_RNA.257-201ENST00000364596 102 ntBASIC0.33□□□□□ -2.36
CCDC34Q96HJ3 RNU6-1318P-201ENST00000365389 103 ntBASIC0.33□□□□□ -2.36
CCDC34Q96HJ3 RNY4P20-201ENST00000516678 93 ntBASIC0.33□□□□□ -2.36
CCDC34Q96HJ3 MIR4514-201ENST00000581410 57 ntBASIC0.33□□□□□ -2.36
CCDC34Q96HJ3 Y_RNA.68-201ENST00000362881 102 ntBASIC0.32□□□□□ -2.36
CCDC34Q96HJ3 Y_RNA.298-201ENST00000364960 107 ntBASIC0.32□□□□□ -2.36
CCDC34Q96HJ3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
CCDC34Q96HJ3 AC073261.1-201ENST00000429409 121 ntBASIC0.32□□□□□ -2.36
CCDC34Q96HJ3 AC069271.1-201ENST00000445577 156 ntBASIC0.32□□□□□ -2.36
CCDC34Q96HJ3 RNU7-129P-201ENST00000516128 62 ntBASIC0.32□□□□□ -2.36
CCDC34Q96HJ3 RNU7-121P-201ENST00000516604 62 ntBASIC0.32□□□□□ -2.36
CCDC34Q96HJ3 AC090425.1-201ENST00000610007 140 ntBASIC0.32□□□□□ -2.36
CCDC34Q96HJ3 SNORD115-2-201ENST00000362842 82 ntBASIC0.31□□□□□ -2.36
CCDC34Q96HJ3 SNORD44.1-201ENST00000363202 61 ntBASIC0.31□□□□□ -2.36
CCDC34Q96HJ3 SNORD118-201ENST00000363593 134 ntBASIC0.31□□□□□ -2.36
CCDC34Q96HJ3 SNORD115-20-201ENST00000365099 82 ntBASIC0.31□□□□□ -2.36
CCDC34Q96HJ3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.31□□□□□ -2.36
CCDC34Q96HJ3 Y_RNA.448-201ENST00000384185 108 ntBASIC0.31□□□□□ -2.36
CCDC34Q96HJ3 AL603914.1-201ENST00000401964 204 ntBASIC0.31□□□□□ -2.36
CCDC34Q96HJ3 MIR1270-201ENST00000459320 83 ntBASIC0.31□□□□□ -2.36
CCDC34Q96HJ3 Y_RNA.681-201ENST00000516445 113 ntBASIC0.31□□□□□ -2.36
CCDC34Q96HJ3 MIR7107-201ENST00000611489 80 ntBASIC0.31□□□□□ -2.36
CCDC34Q96HJ3 AL137067.1-201ENST00000615933 120 ntBASIC0.31□□□□□ -2.36
CCDC34Q96HJ3 Y_RNA.178-201ENST00000363832 102 ntBASIC0.3□□□□□ -2.36
CCDC34Q96HJ3 RNU6-915P-201ENST00000364943 103 ntBASIC0.3□□□□□ -2.36
CCDC34Q96HJ3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
CCDC34Q96HJ3 RNU6-1321P-201ENST00000390905 107 ntBASIC0.3□□□□□ -2.36
CCDC34Q96HJ3 SNORD77B-201ENST00000391112 67 ntBASIC0.3□□□□□ -2.36
CCDC34Q96HJ3 RNU4-69P-201ENST00000410677 143 ntBASIC0.3□□□□□ -2.36
CCDC34Q96HJ3 MIR4500-201ENST00000579472 76 ntBASIC0.3□□□□□ -2.36
CCDC34Q96HJ3 AC244669.1-204ENST00000621564 178 ntBASIC0.3□□□□□ -2.36
CCDC34Q96HJ3 RNU6-449P-201ENST00000383914 107 ntBASIC0.29□□□□□ -2.36
CCDC34Q96HJ3 RNU6-804P-201ENST00000384286 107 ntBASIC0.29□□□□□ -2.36
CCDC34Q96HJ3 MT-TG-201ENST00000387429 68 ntBASIC0.29□□□□□ -2.36
CCDC34Q96HJ3 MIR513C-201ENST00000401352 84 ntBASIC0.29□□□□□ -2.36
CCDC34Q96HJ3 MIR548L-201ENST00000408303 86 ntBASIC0.29□□□□□ -2.36
CCDC34Q96HJ3 RNU6-1135P-201ENST00000411083 103 ntBASIC0.29□□□□□ -2.36
CCDC34Q96HJ3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CCDC34Q96HJ3 SNORD114-10-201ENST00000363409 72 ntBASIC0.28□□□□□ -2.36
CCDC34Q96HJ3 Y_RNA.150-201ENST00000363562 102 ntBASIC0.28□□□□□ -2.36
CCDC34Q96HJ3 RNY1P2-201ENST00000364820 117 ntBASIC0.28□□□□□ -2.36
CCDC34Q96HJ3 RNU6-815P-201ENST00000384080 113 ntBASIC0.28□□□□□ -2.36
CCDC34Q96HJ3 RNU6-187P-201ENST00000384139 106 ntBASIC0.28□□□□□ -2.36
CCDC34Q96HJ3 RNU6-1104P-201ENST00000384723 104 ntBASIC0.28□□□□□ -2.36
CCDC34Q96HJ3 MIR206-201ENST00000384872 86 ntBASIC0.28□□□□□ -2.36
CCDC34Q96HJ3 AC108740.1-201ENST00000498629 225 ntBASIC0.28□□□□□ -2.36
CCDC34Q96HJ3 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.28□□□□□ -2.36
CCDC34Q96HJ3 Y_RNA.778-201ENST00000620203 90 ntBASIC0.28□□□□□ -2.36
CCDC34Q96HJ3 SNORD115-24-201ENST00000363528 82 ntBASIC0.27□□□□□ -2.37
CCDC34Q96HJ3 Y_RNA.294-201ENST00000364916 102 ntBASIC0.27□□□□□ -2.37
CCDC34Q96HJ3 MIRLET7F2-201ENST00000385277 83 ntBASIC0.27□□□□□ -2.37
CCDC34Q96HJ3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.27□□□□□ -2.37
CCDC34Q96HJ3 MIR4752-201ENST00000579672 72 ntBASIC0.27□□□□□ -2.37
CCDC34Q96HJ3 AC098479.1-201ENST00000609225 154 ntBASIC0.27□□□□□ -2.37
CCDC34Q96HJ3 Y_RNA.280-201ENST00000364765 112 ntBASIC0.26□□□□□ -2.37
CCDC34Q96HJ3 RNU6-616P-201ENST00000384353 107 ntBASIC0.26□□□□□ -2.37
CCDC34Q96HJ3 SNORD28-201ENST00000384706 75 ntBASIC0.26□□□□□ -2.37
CCDC34Q96HJ3 RNA5SP63-201ENST00000391225 112 ntBASIC0.26□□□□□ -2.37
CCDC34Q96HJ3 BX276092.1-201ENST00000427368 251 ntBASIC0.26□□□□□ -2.37
CCDC34Q96HJ3 AC023932.2-201ENST00000603176 175 ntBASIC0.26□□□□□ -2.37
CCDC34Q96HJ3 RNU4-67P-201ENST00000364569 141 ntBASIC0.25□□□□□ -2.37
CCDC34Q96HJ3 Y_RNA.441-201ENST00000384123 112 ntBASIC0.25□□□□□ -2.37
CCDC34Q96HJ3 RNU6-1307P-201ENST00000391012 103 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms