Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SNORD115-19-201ENST00000363098 82 ntBASIC0.6□□□□□ -2.31
PDLIM5Q96HC4 SNORD115-18-201ENST00000363293 82 ntBASIC0.6□□□□□ -2.31
PDLIM5Q96HC4 SNORD115-17-201ENST00000364612 82 ntBASIC0.6□□□□□ -2.31
PDLIM5Q96HC4 MIR206-201ENST00000384872 86 ntBASIC0.6□□□□□ -2.31
PDLIM5Q96HC4 MIR573-201ENST00000384964 99 ntBASIC0.6□□□□□ -2.31
PDLIM5Q96HC4 RNU6-1321P-201ENST00000390905 107 ntBASIC0.6□□□□□ -2.31
PDLIM5Q96HC4 RNU6-1307P-201ENST00000391012 103 ntBASIC0.6□□□□□ -2.31
PDLIM5Q96HC4 RPL39P25-201ENST00000449384 154 ntBASIC0.6□□□□□ -2.31
PDLIM5Q96HC4 SNORA25.16-201ENST00000516741 121 ntBASIC0.6□□□□□ -2.31
PDLIM5Q96HC4 Y_RNA.712-201ENST00000517011 92 ntBASIC0.6□□□□□ -2.31
PDLIM5Q96HC4 AC138749.4-201ENST00000563970 127 ntBASIC0.6□□□□□ -2.31
PDLIM5Q96HC4 MIR3163-201ENST00000581592 73 ntBASIC0.6□□□□□ -2.31
PDLIM5Q96HC4 AL157777.2-201ENST00000258070 137 ntBASIC0.59□□□□□ -2.31
PDLIM5Q96HC4 RNU6-403P-201ENST00000363163 104 ntBASIC0.59□□□□□ -2.31
PDLIM5Q96HC4 SNORD115-35-201ENST00000365122 82 ntBASIC0.59□□□□□ -2.31
PDLIM5Q96HC4 SNORD114-22-201ENST00000365423 72 ntBASIC0.59□□□□□ -2.31
PDLIM5Q96HC4 MIR520E-201ENST00000384867 87 ntBASIC0.59□□□□□ -2.31
PDLIM5Q96HC4 SNORD77B-201ENST00000391112 67 ntBASIC0.59□□□□□ -2.31
PDLIM5Q96HC4 SNORD100-201ENST00000408573 76 ntBASIC0.59□□□□□ -2.31
PDLIM5Q96HC4 AC002350.1-201ENST00000490759 375 ntBASIC0.59□□□□□ -2.31
PDLIM5Q96HC4 MIR3910-1-201ENST00000580936 111 ntBASIC0.59□□□□□ -2.31
PDLIM5Q96HC4 MIR4452-201ENST00000583004 71 ntBASIC0.59□□□□□ -2.31
PDLIM5Q96HC4 AL078603.1-201ENST00000603824 313 ntBASIC0.59□□□□□ -2.31
PDLIM5Q96HC4 MIR3914-2-201ENST00000637339 95 ntBASIC0.59□□□□□ -2.31
PDLIM5Q96HC4 Y_RNA.213-201ENST00000364178 111 ntBASIC0.58□□□□□ -2.32
PDLIM5Q96HC4 RNY1P2-201ENST00000364820 117 ntBASIC0.58□□□□□ -2.32
PDLIM5Q96HC4 Y_RNA.346-201ENST00000365385 112 ntBASIC0.58□□□□□ -2.32
PDLIM5Q96HC4 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
PDLIM5Q96HC4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
PDLIM5Q96HC4 RNA5SP222-201ENST00000411039 105 ntBASIC0.58□□□□□ -2.32
PDLIM5Q96HC4 TMSB4XP3-201ENST00000445144 114 ntBASIC0.58□□□□□ -2.32
PDLIM5Q96HC4 RNU7-2P-201ENST00000516096 62 ntBASIC0.58□□□□□ -2.32
PDLIM5Q96HC4 RNU6-765P-201ENST00000516916 99 ntBASIC0.58□□□□□ -2.32
PDLIM5Q96HC4 RNU6-448P-201ENST00000517052 107 ntBASIC0.58□□□□□ -2.32
PDLIM5Q96HC4 AC133485.1-201ENST00000567176 124 ntBASIC0.58□□□□□ -2.32
PDLIM5Q96HC4 AC138907.6-201ENST00000568401 126 ntBASIC0.58□□□□□ -2.32
PDLIM5Q96HC4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
PDLIM5Q96HC4 RNA5SP133-201ENST00000363368 119 ntBASIC0.57□□□□□ -2.32
PDLIM5Q96HC4 Y_RNA.127-201ENST00000363386 109 ntBASIC0.57□□□□□ -2.32
PDLIM5Q96HC4 SNORD116-14-201ENST00000383894 92 ntBASIC0.57□□□□□ -2.32
PDLIM5Q96HC4 SNORD116-17-201ENST00000383929 92 ntBASIC0.57□□□□□ -2.32
PDLIM5Q96HC4 SNORD116-15-201ENST00000384445 92 ntBASIC0.57□□□□□ -2.32
PDLIM5Q96HC4 SNORD116-19-201ENST00000384729 92 ntBASIC0.57□□□□□ -2.32
PDLIM5Q96HC4 MIR548D2-201ENST00000384955 97 ntBASIC0.57□□□□□ -2.32
PDLIM5Q96HC4 MIR759-201ENST00000390224 91 ntBASIC0.57□□□□□ -2.32
PDLIM5Q96HC4 RNU6-531P-201ENST00000516694 104 ntBASIC0.57□□□□□ -2.32
PDLIM5Q96HC4 MIR3612-201ENST00000579753 87 ntBASIC0.57□□□□□ -2.32
PDLIM5Q96HC4 MIR1255B1-201ENST00000636325 63 ntBASIC0.57□□□□□ -2.32
PDLIM5Q96HC4 U6.109-201ENST00000636749 87 ntBASIC0.57□□□□□ -2.32
PDLIM5Q96HC4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
PDLIM5Q96HC4 Y_RNA.119-201ENST00000363301 96 ntBASIC0.56□□□□□ -2.32
PDLIM5Q96HC4 RNY4P6-201ENST00000363667 96 ntBASIC0.56□□□□□ -2.32
PDLIM5Q96HC4 Y_RNA.328-201ENST00000365208 113 ntBASIC0.56□□□□□ -2.32
PDLIM5Q96HC4 Y_RNA.344-201ENST00000365381 112 ntBASIC0.56□□□□□ -2.32
PDLIM5Q96HC4 SNORA36.2-201ENST00000384004 127 ntBASIC0.56□□□□□ -2.32
PDLIM5Q96HC4 Y_RNA.448-201ENST00000384185 108 ntBASIC0.56□□□□□ -2.32
PDLIM5Q96HC4 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
PDLIM5Q96HC4 MIR518E-201ENST00000385252 88 ntBASIC0.56□□□□□ -2.32
PDLIM5Q96HC4 RNA5SP220-201ENST00000516298 104 ntBASIC0.56□□□□□ -2.32
PDLIM5Q96HC4 RNU6-521P-201ENST00000516663 105 ntBASIC0.56□□□□□ -2.32
PDLIM5Q96HC4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
PDLIM5Q96HC4 MIR18A-201ENST00000362310 71 ntBASIC0.55□□□□□ -2.32
PDLIM5Q96HC4 Y_RNA.98-201ENST00000363109 102 ntBASIC0.55□□□□□ -2.32
PDLIM5Q96HC4 Y_RNA.261-201ENST00000364631 102 ntBASIC0.55□□□□□ -2.32
PDLIM5Q96HC4 SNORA72.6-201ENST00000384520 129 ntBASIC0.55□□□□□ -2.32
PDLIM5Q96HC4 Y_RNA.563-201ENST00000384707 108 ntBASIC0.55□□□□□ -2.32
PDLIM5Q96HC4 RNU7-48P-201ENST00000458875 63 ntBASIC0.55□□□□□ -2.32
PDLIM5Q96HC4 RNU6-1194P-201ENST00000516208 104 ntBASIC0.55□□□□□ -2.32
PDLIM5Q96HC4 AP003327.1-201ENST00000529684 127 ntBASIC0.55□□□□□ -2.32
PDLIM5Q96HC4 MTND5P34-201ENST00000568888 325 ntBASIC0.55□□□□□ -2.32
PDLIM5Q96HC4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.55□□□□□ -2.32
PDLIM5Q96HC4 MIR6734-201ENST00000621166 68 ntBASIC0.55□□□□□ -2.32
PDLIM5Q96HC4 uc_338.16-201ENST00000621804 95 ntBASIC0.55□□□□□ -2.32
PDLIM5Q96HC4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.55□□□□□ -2.32
PDLIM5Q96HC4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
PDLIM5Q96HC4 RNU6-363P-201ENST00000362895 105 ntBASIC0.54□□□□□ -2.32
PDLIM5Q96HC4 RNU4-58P-201ENST00000363192 141 ntBASIC0.54□□□□□ -2.32
PDLIM5Q96HC4 Y_RNA.116-201ENST00000363292 103 ntBASIC0.54□□□□□ -2.32
PDLIM5Q96HC4 Y_RNA.353-201ENST00000365440 108 ntBASIC0.54□□□□□ -2.32
PDLIM5Q96HC4 RNU6-42P-201ENST00000384165 107 ntBASIC0.54□□□□□ -2.32
PDLIM5Q96HC4 RNU6-429P-201ENST00000384582 108 ntBASIC0.54□□□□□ -2.32
PDLIM5Q96HC4 Y_RNA.536-201ENST00000384621 113 ntBASIC0.54□□□□□ -2.32
PDLIM5Q96HC4 RNU6-1333P-201ENST00000516162 93 ntBASIC0.54□□□□□ -2.32
PDLIM5Q96HC4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.54□□□□□ -2.32
PDLIM5Q96HC4 MIR376B-201ENST00000614515 100 ntBASIC0.54□□□□□ -2.32
PDLIM5Q96HC4 AL365222.1-201ENST00000614661 98 ntBASIC0.54□□□□□ -2.32
PDLIM5Q96HC4 AC132825.6-201ENST00000638861 357 ntBASIC0.54□□□□□ -2.32
PDLIM5Q96HC4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
PDLIM5Q96HC4 SNORD113-1-201ENST00000365321 69 ntBASIC0.53□□□□□ -2.32
PDLIM5Q96HC4 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
PDLIM5Q96HC4 RNU6-291P-201ENST00000384720 107 ntBASIC0.53□□□□□ -2.32
PDLIM5Q96HC4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.53□□□□□ -2.32
PDLIM5Q96HC4 AL353813.1-201ENST00000440700 253 ntBASIC0.53□□□□□ -2.32
PDLIM5Q96HC4 DEFB131E-201ENST00000532329 154 ntBASIC0.53□□□□□ -2.32
PDLIM5Q96HC4 MIR4679-2-201ENST00000578358 77 ntBASIC0.53□□□□□ -2.32
PDLIM5Q96HC4 RNA5SP245-201ENST00000364239 121 ntBASIC0.52□□□□□ -2.33
PDLIM5Q96HC4 RNA5SP117-201ENST00000365294 118 ntBASIC0.52□□□□□ -2.33
PDLIM5Q96HC4 Y_RNA.362-201ENST00000365518 110 ntBASIC0.52□□□□□ -2.33
PDLIM5Q96HC4 RNY1P8-201ENST00000383970 114 ntBASIC0.52□□□□□ -2.33
PDLIM5Q96HC4 MIR34C-201ENST00000384831 77 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms