Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
BRF1Q92994 SNORD113.3-201ENST00000364630 78 ntBASIC1.66□□□□□ -2.14
BRF1Q92994 Y_RNA.363-201ENST00000365529 113 ntBASIC1.66□□□□□ -2.14
BRF1Q92994 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
BRF1Q92994 Y_RNA.567-201ENST00000384736 106 ntBASIC1.66□□□□□ -2.14
BRF1Q92994 MIR1302-4-201ENST00000408701 150 ntBASIC1.66□□□□□ -2.14
BRF1Q92994 AC015712.3-201ENST00000559380 164 ntBASIC1.66□□□□□ -2.14
BRF1Q92994 AC104984.5-201ENST00000586878 94 ntBASIC1.66□□□□□ -2.14
BRF1Q92994 SNORA2B-201ENST00000384583 137 ntBASIC1.65□□□□□ -2.15
BRF1Q92994 SNORA75.2-201ENST00000391138 150 ntBASIC1.65□□□□□ -2.15
BRF1Q92994 SNORA75.3-201ENST00000391231 150 ntBASIC1.65□□□□□ -2.15
BRF1Q92994 AC036111.3-201ENST00000526389 112 ntBASIC1.65□□□□□ -2.15
BRF1Q92994 MIR4285-201ENST00000581001 85 ntBASIC1.65□□□□□ -2.15
BRF1Q92994 RNU6-86P-201ENST00000606534 107 ntBASIC1.65□□□□□ -2.15
BRF1Q92994 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.65□□□□□ -2.15
BRF1Q92994 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
BRF1Q92994 RNU6-1244P-201ENST00000363614 108 ntBASIC1.64□□□□□ -2.15
BRF1Q92994 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.64□□□□□ -2.15
BRF1Q92994 BTF3P4-201ENST00000418852 495 ntBASIC1.64□□□□□ -2.15
BRF1Q92994 SPINT5P-201ENST00000448174 155 ntBASIC1.64□□□□□ -2.15
BRF1Q92994 AC108210.2-201ENST00000503681 201 ntBASIC1.64□□□□□ -2.15
BRF1Q92994 SNORA72.7-201ENST00000516349 94 ntBASIC1.64□□□□□ -2.15
BRF1Q92994 AC026421.1-201ENST00000519101 163 ntBASIC1.64□□□□□ -2.15
BRF1Q92994 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.64□□□□□ -2.15
BRF1Q92994 MTND5P40-201ENST00000559945 246 ntBASIC1.64□□□□□ -2.15
BRF1Q92994 SNORD58A-201ENST00000383875 65 ntBASIC1.63□□□□□ -2.15
BRF1Q92994 SNORA80D-201ENST00000384488 135 ntBASIC1.63□□□□□ -2.15
BRF1Q92994 SNORD111-201ENST00000408139 94 ntBASIC1.63□□□□□ -2.15
BRF1Q92994 AL591704.2-201ENST00000421658 181 ntBASIC1.63□□□□□ -2.15
BRF1Q92994 RNU7-21P-201ENST00000459430 62 ntBASIC1.63□□□□□ -2.15
BRF1Q92994 U6.109-201ENST00000636749 87 ntBASIC1.63□□□□□ -2.15
BRF1Q92994 Y_RNA.119-201ENST00000363301 96 ntBASIC1.62□□□□□ -2.15
BRF1Q92994 RNA5SP133-201ENST00000363368 119 ntBASIC1.62□□□□□ -2.15
BRF1Q92994 SNORD116-10-201ENST00000363791 102 ntBASIC1.62□□□□□ -2.15
BRF1Q92994 SNORD73B-201ENST00000364394 72 ntBASIC1.62□□□□□ -2.15
BRF1Q92994 Y_RNA.330-201ENST00000365230 109 ntBASIC1.62□□□□□ -2.15
BRF1Q92994 RNU6-162P-201ENST00000516228 103 ntBASIC1.62□□□□□ -2.15
BRF1Q92994 AC090897.1-201ENST00000580909 226 ntBASIC1.62□□□□□ -2.15
BRF1Q92994 MIR4491-201ENST00000581087 68 ntBASIC1.62□□□□□ -2.15
BRF1Q92994 AC106800.4-201ENST00000614905 153 ntBASIC1.62□□□□□ -2.15
BRF1Q92994 RNU1-36P-201ENST00000365130 165 ntBASIC1.61□□□□□ -2.15
BRF1Q92994 Y_RNA.588-201ENST00000391254 102 ntBASIC1.61□□□□□ -2.15
BRF1Q92994 SNRPGP12-201ENST00000449481 213 ntBASIC1.61□□□□□ -2.15
BRF1Q92994 SNORD79.1-201ENST00000516069 84 ntBASIC1.61□□□□□ -2.15
BRF1Q92994 AC103810.7-201ENST00000607821 91 ntBASIC1.61□□□□□ -2.15
BRF1Q92994 RNA5SP99-201ENST00000364020 114 ntBASIC1.6□□□□□ -2.15
BRF1Q92994 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.6□□□□□ -2.15
BRF1Q92994 RNU6-910P-201ENST00000390844 107 ntBASIC1.6□□□□□ -2.15
BRF1Q92994 SNORD12-201ENST00000391002 90 ntBASIC1.6□□□□□ -2.15
BRF1Q92994 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.6□□□□□ -2.15
BRF1Q92994 SNORD93-201ENST00000408813 74 ntBASIC1.6□□□□□ -2.15
BRF1Q92994 RNU4-62P-201ENST00000410125 130 ntBASIC1.6□□□□□ -2.15
BRF1Q92994 RNU7-185P-201ENST00000459215 60 ntBASIC1.6□□□□□ -2.15
BRF1Q92994 MIR4500-201ENST00000579472 76 ntBASIC1.6□□□□□ -2.15
BRF1Q92994 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.6□□□□□ -2.15
BRF1Q92994 MIR6715A-201ENST00000615929 79 ntBASIC1.6□□□□□ -2.15
BRF1Q92994 AL161722.3-201ENST00000605789 2983 ntBASIC1.6□□□□□ -2.15
BRF1Q92994 RNU6-1125P-201ENST00000363601 107 ntBASIC1.59□□□□□ -2.15
BRF1Q92994 Y_RNA.190-201ENST00000363964 101 ntBASIC1.59□□□□□ -2.15
BRF1Q92994 RNU6-571P-201ENST00000384128 107 ntBASIC1.59□□□□□ -2.15
BRF1Q92994 RNU6-480P-201ENST00000384332 107 ntBASIC1.59□□□□□ -2.15
BRF1Q92994 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.59□□□□□ -2.15
BRF1Q92994 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
BRF1Q92994 snoU13.21-201ENST00000459368 105 ntBASIC1.59□□□□□ -2.15
BRF1Q92994 RNU6-1194P-201ENST00000516208 104 ntBASIC1.59□□□□□ -2.15
BRF1Q92994 MIR7974-201ENST00000615835 79 ntBASIC1.59□□□□□ -2.15
BRF1Q92994 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.59□□□□□ -2.15
BRF1Q92994 AL353997.5-201ENST00000618886 171 ntBASIC1.59□□□□□ -2.15
BRF1Q92994 RNU6-934P-201ENST00000365154 107 ntBASIC1.58□□□□□ -2.16
BRF1Q92994 RNU7-90P-201ENST00000459216 62 ntBASIC1.58□□□□□ -2.16
BRF1Q92994 AC068338.1-201ENST00000565567 176 ntBASIC1.58□□□□□ -2.16
BRF1Q92994 ZNF209P-201ENST00000593450 2304 ntBASIC1.58□□□□□ -2.16
BRF1Q92994 RNU4-58P-201ENST00000363192 141 ntBASIC1.57□□□□□ -2.16
BRF1Q92994 AC023934.1-201ENST00000574529 2389 ntBASIC1.57□□□□□ -2.16
BRF1Q92994 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.56□□□□□ -2.16
BRF1Q92994 RNU6-53P-201ENST00000365367 106 ntBASIC1.56□□□□□ -2.16
BRF1Q92994 MIR450A2-201ENST00000385022 100 ntBASIC1.56□□□□□ -2.16
BRF1Q92994 MIR758-201ENST00000390227 88 ntBASIC1.56□□□□□ -2.16
BRF1Q92994 MIR1257-201ENST00000408490 117 ntBASIC1.56□□□□□ -2.16
BRF1Q92994 SNORD83.1-201ENST00000411362 77 ntBASIC1.56□□□□□ -2.16
BRF1Q92994 AC108667.1-201ENST00000428618 249 ntBASIC1.56□□□□□ -2.16
BRF1Q92994 RNU1-123P-201ENST00000458950 160 ntBASIC1.56□□□□□ -2.16
BRF1Q92994 RNU6-850P-201ENST00000516934 103 ntBASIC1.56□□□□□ -2.16
BRF1Q92994 RNU1-92P-201ENST00000517017 135 ntBASIC1.56□□□□□ -2.16
BRF1Q92994 RNU6-762P-201ENST00000517107 102 ntBASIC1.56□□□□□ -2.16
BRF1Q92994 SNORA70.22-201ENST00000517160 124 ntBASIC1.56□□□□□ -2.16
BRF1Q92994 RNU6-1134P-201ENST00000365156 101 ntBASIC1.55□□□□□ -2.16
BRF1Q92994 MIR181B2-201ENST00000385004 89 ntBASIC1.55□□□□□ -2.16
BRF1Q92994 RPS26P5-201ENST00000418544 335 ntBASIC1.55□□□□□ -2.16
BRF1Q92994 AC004223.1-201ENST00000479840 271 ntBASIC1.55□□□□□ -2.16
BRF1Q92994 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.55□□□□□ -2.16
BRF1Q92994 RNU6-531P-201ENST00000516694 104 ntBASIC1.55□□□□□ -2.16
BRF1Q92994 SNORA25.16-201ENST00000516741 121 ntBASIC1.55□□□□□ -2.16
BRF1Q92994 Y_RNA.17-201ENST00000362433 111 ntBASIC1.54□□□□□ -2.16
BRF1Q92994 RNU6-820P-201ENST00000384273 107 ntBASIC1.54□□□□□ -2.16
BRF1Q92994 MIR125B2-201ENST00000385128 89 ntBASIC1.54□□□□□ -2.16
BRF1Q92994 RNU4-83P-201ENST00000410863 133 ntBASIC1.54□□□□□ -2.16
BRF1Q92994 AC023827.1-201ENST00000569247 97 ntBASIC1.54□□□□□ -2.16
BRF1Q92994 AL513043.2-201ENST00000573941 143 ntBASIC1.54□□□□□ -2.16
BRF1Q92994 MIR8066-201ENST00000617280 78 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms