Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RNU4-36P-201ENST00000364294 144 ntBASIC1.45□□□□□ -2.18
ERCC4Q92889 RNY1P2-201ENST00000364820 117 ntBASIC1.45□□□□□ -2.18
ERCC4Q92889 Y_RNA.330-201ENST00000365230 109 ntBASIC1.45□□□□□ -2.18
ERCC4Q92889 Y_RNA.348-201ENST00000365403 103 ntBASIC1.45□□□□□ -2.18
ERCC4Q92889 Y_RNA.466-201ENST00000384294 113 ntBASIC1.45□□□□□ -2.18
ERCC4Q92889 SNORA2B-201ENST00000384583 137 ntBASIC1.45□□□□□ -2.18
ERCC4Q92889 Y_RNA.544-201ENST00000384650 113 ntBASIC1.45□□□□□ -2.18
ERCC4Q92889 SNORD111-201ENST00000408139 94 ntBASIC1.45□□□□□ -2.18
ERCC4Q92889 Y_RNA.601-201ENST00000410500 113 ntBASIC1.45□□□□□ -2.18
ERCC4Q92889 RNU6-321P-201ENST00000410912 106 ntBASIC1.45□□□□□ -2.18
ERCC4Q92889 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.45□□□□□ -2.18
ERCC4Q92889 snoU13.21-201ENST00000459368 105 ntBASIC1.45□□□□□ -2.18
ERCC4Q92889 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.45□□□□□ -2.18
ERCC4Q92889 MIR4421-201ENST00000578133 69 ntBASIC1.45□□□□□ -2.18
ERCC4Q92889 AC008163.1-202ENST00000636004 2889 ntBASIC1.44□□□□□ -2.18
ERCC4Q92889 Y_RNA.98-201ENST00000363109 102 ntBASIC1.44□□□□□ -2.18
ERCC4Q92889 SNORA7.1-201ENST00000363750 139 ntBASIC1.44□□□□□ -2.18
ERCC4Q92889 SNORA25.9-201ENST00000365087 128 ntBASIC1.44□□□□□ -2.18
ERCC4Q92889 RNU7-90P-201ENST00000459216 62 ntBASIC1.44□□□□□ -2.18
ERCC4Q92889 SNORA70.22-201ENST00000517160 124 ntBASIC1.44□□□□□ -2.18
ERCC4Q92889 AC138749.4-201ENST00000563970 127 ntBASIC1.44□□□□□ -2.18
ERCC4Q92889 AL512310.12-203ENST00000640543 90 ntBASIC1.44□□□□□ -2.18
ERCC4Q92889 Y_RNA.10-201ENST00000362371 110 ntBASIC1.43□□□□□ -2.18
ERCC4Q92889 MIR499A-201ENST00000384903 122 ntBASIC1.43□□□□□ -2.18
ERCC4Q92889 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.43□□□□□ -2.18
ERCC4Q92889 MRPL35P3-201ENST00000421557 364 ntBASIC1.43□□□□□ -2.18
ERCC4Q92889 SCARNA23-201ENST00000516060 130 ntBASIC1.43□□□□□ -2.18
ERCC4Q92889 RNU6-109P-201ENST00000516364 107 ntBASIC1.43□□□□□ -2.18
ERCC4Q92889 RNU6-184P-201ENST00000516514 107 ntBASIC1.43□□□□□ -2.18
ERCC4Q92889 Y_RNA.247-201ENST00000364500 92 ntBASIC1.42□□□□□ -2.18
ERCC4Q92889 RNU6-865P-201ENST00000364772 107 ntBASIC1.42□□□□□ -2.18
ERCC4Q92889 RNU6-905P-201ENST00000384434 107 ntBASIC1.42□□□□□ -2.18
ERCC4Q92889 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.42□□□□□ -2.18
ERCC4Q92889 AC133485.1-201ENST00000567176 124 ntBASIC1.42□□□□□ -2.18
ERCC4Q92889 AP001362.1-201ENST00000625165 124 ntBASIC1.42□□□□□ -2.18
ERCC4Q92889 RNU6-1298P-201ENST00000362456 101 ntBASIC1.41□□□□□ -2.18
ERCC4Q92889 RNA5SP327-201ENST00000362494 101 ntBASIC1.41□□□□□ -2.18
ERCC4Q92889 Y_RNA.93-201ENST00000363066 109 ntBASIC1.41□□□□□ -2.18
ERCC4Q92889 RNU6-640P-201ENST00000363693 105 ntBASIC1.41□□□□□ -2.18
ERCC4Q92889 SNORD38.1-201ENST00000363863 68 ntBASIC1.41□□□□□ -2.18
ERCC4Q92889 Y_RNA.588-201ENST00000391254 102 ntBASIC1.41□□□□□ -2.18
ERCC4Q92889 AC019288.1-201ENST00000557918 224 ntBASIC1.41□□□□□ -2.18
ERCC4Q92889 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.41□□□□□ -2.18
ERCC4Q92889 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ERCC4Q92889 HSBP1P2-201ENST00000299671 229 ntBASIC1.4□□□□□ -2.19
ERCC4Q92889 RNU6-369P-201ENST00000362515 102 ntBASIC1.4□□□□□ -2.19
ERCC4Q92889 RNU1-36P-201ENST00000365130 165 ntBASIC1.4□□□□□ -2.19
ERCC4Q92889 SNORA25-201ENST00000384384 134 ntBASIC1.4□□□□□ -2.19
ERCC4Q92889 RNU7-185P-201ENST00000459215 60 ntBASIC1.4□□□□□ -2.19
ERCC4Q92889 Y_RNA.677-201ENST00000516401 85 ntBASIC1.4□□□□□ -2.19
ERCC4Q92889 AC023827.1-201ENST00000569247 97 ntBASIC1.4□□□□□ -2.19
ERCC4Q92889 AC027335.2-201ENST00000624030 375 ntBASIC1.4□□□□□ -2.19
ERCC4Q92889 SNORA25.8-201ENST00000364831 128 ntBASIC1.39□□□□□ -2.19
ERCC4Q92889 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
ERCC4Q92889 SNORA40.6-201ENST00000391153 128 ntBASIC1.39□□□□□ -2.19
ERCC4Q92889 SNORD83.1-201ENST00000411362 77 ntBASIC1.39□□□□□ -2.19
ERCC4Q92889 AC002429.1-201ENST00000437672 148 ntBASIC1.39□□□□□ -2.19
ERCC4Q92889 MIR4491-201ENST00000581087 68 ntBASIC1.39□□□□□ -2.19
ERCC4Q92889 RNU6-170P-201ENST00000362832 104 ntBASIC1.38□□□□□ -2.19
ERCC4Q92889 SNORD45B-201ENST00000364617 72 ntBASIC1.38□□□□□ -2.19
ERCC4Q92889 RNU6-934P-201ENST00000365154 107 ntBASIC1.38□□□□□ -2.19
ERCC4Q92889 AC004941.2-201ENST00000427009 228 ntBASIC1.38□□□□□ -2.19
ERCC4Q92889 MTATP8P2-201ENST00000435212 202 ntBASIC1.38□□□□□ -2.19
ERCC4Q92889 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.38□□□□□ -2.19
ERCC4Q92889 MIR4777-201ENST00000583710 86 ntBASIC1.38□□□□□ -2.19
ERCC4Q92889 MIR4439-201ENST00000583746 80 ntBASIC1.38□□□□□ -2.19
ERCC4Q92889 AC096720.1-201ENST00000604441 183 ntBASIC1.38□□□□□ -2.19
ERCC4Q92889 AC012531.4-201ENST00000616509 177 ntBASIC1.38□□□□□ -2.19
ERCC4Q92889 AC091304.10-201ENST00000641554 121 ntBASIC1.38□□□□□ -2.19
ERCC4Q92889 Y_RNA.95-201ENST00000363079 95 ntBASIC1.37□□□□□ -2.19
ERCC4Q92889 Y_RNA.107-201ENST00000363190 121 ntBASIC1.37□□□□□ -2.19
ERCC4Q92889 RNA5SP133-201ENST00000363368 119 ntBASIC1.37□□□□□ -2.19
ERCC4Q92889 MIR19B1-201ENST00000384829 87 ntBASIC1.37□□□□□ -2.19
ERCC4Q92889 RPS26P5-201ENST00000418544 335 ntBASIC1.37□□□□□ -2.19
ERCC4Q92889 RPS29P28-201ENST00000446439 141 ntBASIC1.37□□□□□ -2.19
ERCC4Q92889 SNORA40.13-201ENST00000516379 120 ntBASIC1.37□□□□□ -2.19
ERCC4Q92889 RNU7-40P-201ENST00000516397 64 ntBASIC1.37□□□□□ -2.19
ERCC4Q92889 Y_RNA.694-201ENST00000516677 117 ntBASIC1.37□□□□□ -2.19
ERCC4Q92889 MIR3660-201ENST00000584845 100 ntBASIC1.37□□□□□ -2.19
ERCC4Q92889 AL157834.3-201ENST00000615543 103 ntBASIC1.37□□□□□ -2.19
ERCC4Q92889 AL353770.2-201ENST00000620024 78 ntBASIC1.37□□□□□ -2.19
ERCC4Q92889 U6.109-201ENST00000636749 87 ntBASIC1.37□□□□□ -2.19
ERCC4Q92889 AC023934.1-201ENST00000574529 2389 ntBASIC1.36□□□□□ -2.19
ERCC4Q92889 RNU6-1163P-201ENST00000364516 107 ntBASIC1.36□□□□□ -2.19
ERCC4Q92889 MIR518E-201ENST00000385252 88 ntBASIC1.36□□□□□ -2.19
ERCC4Q92889 SNORD93-201ENST00000408813 74 ntBASIC1.36□□□□□ -2.19
ERCC4Q92889 AC020891.4-201ENST00000605745 93 ntBASIC1.36□□□□□ -2.19
ERCC4Q92889 MIR8070-201ENST00000616510 88 ntBASIC1.36□□□□□ -2.19
ERCC4Q92889 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
ERCC4Q92889 Y_RNA.119-201ENST00000363301 96 ntBASIC1.35□□□□□ -2.19
ERCC4Q92889 Y_RNA.173-201ENST00000363776 113 ntBASIC1.35□□□□□ -2.19
ERCC4Q92889 Y_RNA.327-201ENST00000365201 102 ntBASIC1.35□□□□□ -2.19
ERCC4Q92889 MIR125B2-201ENST00000385128 89 ntBASIC1.35□□□□□ -2.19
ERCC4Q92889 MIR548G-201ENST00000408442 89 ntBASIC1.35□□□□□ -2.19
ERCC4Q92889 MIR1257-201ENST00000408490 117 ntBASIC1.35□□□□□ -2.19
ERCC4Q92889 RNU6-795P-201ENST00000516323 103 ntBASIC1.35□□□□□ -2.19
ERCC4Q92889 MIR2052-201ENST00000636055 55 ntBASIC1.35□□□□□ -2.19
ERCC4Q92889 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
ERCC4Q92889 SNORD38.2-201ENST00000384470 69 ntBASIC1.34□□□□□ -2.19
ERCC4Q92889 Y_RNA.508-201ENST00000384502 114 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms