Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 RNU7-120P-201ENST00000459334 63 ntBASIC0.12□□□□□ -2.39
CCDC197Q8NCU1 Y_RNA.686-201ENST00000516548 134 ntBASIC0.12□□□□□ -2.39
CCDC197Q8NCU1 RNU6-682P-201ENST00000363843 106 ntBASIC0.11□□□□□ -2.39
CCDC197Q8NCU1 RNU6-309P-201ENST00000364573 106 ntBASIC0.11□□□□□ -2.39
CCDC197Q8NCU1 RNU6-200P-201ENST00000364743 107 ntBASIC0.11□□□□□ -2.39
CCDC197Q8NCU1 SNORD18B-201ENST00000365659 72 ntBASIC0.11□□□□□ -2.39
CCDC197Q8NCU1 Y_RNA.441-201ENST00000384123 112 ntBASIC0.11□□□□□ -2.39
CCDC197Q8NCU1 RNU6-187P-201ENST00000384139 106 ntBASIC0.11□□□□□ -2.39
CCDC197Q8NCU1 RNU6-1135P-201ENST00000411083 103 ntBASIC0.11□□□□□ -2.39
CCDC197Q8NCU1 RNU6-138P-201ENST00000515952 107 ntBASIC0.11□□□□□ -2.39
CCDC197Q8NCU1 Y_RNA.690-201ENST00000516603 95 ntBASIC0.11□□□□□ -2.39
CCDC197Q8NCU1 RNU6-861P-201ENST00000516745 106 ntBASIC0.11□□□□□ -2.39
CCDC197Q8NCU1 SNORA42.1-201ENST00000363515 137 ntBASIC0.1□□□□□ -2.39
CCDC197Q8NCU1 Y_RNA.401-201ENST00000383965 117 ntBASIC0.1□□□□□ -2.39
CCDC197Q8NCU1 RNU6-429P-201ENST00000384582 108 ntBASIC0.1□□□□□ -2.39
CCDC197Q8NCU1 RNU6-1321P-201ENST00000390905 107 ntBASIC0.1□□□□□ -2.39
CCDC197Q8NCU1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.1□□□□□ -2.39
CCDC197Q8NCU1 RNU6-848P-201ENST00000515948 107 ntBASIC0.1□□□□□ -2.39
CCDC197Q8NCU1 RNU6-617P-201ENST00000516147 107 ntBASIC0.1□□□□□ -2.39
CCDC197Q8NCU1 RNU6-473P-201ENST00000516164 107 ntBASIC0.1□□□□□ -2.39
CCDC197Q8NCU1 RNU6-1049P-201ENST00000516414 107 ntBASIC0.1□□□□□ -2.39
CCDC197Q8NCU1 SNORA9.1-201ENST00000362412 131 ntBASIC0.09□□□□□ -2.4
CCDC197Q8NCU1 Y_RNA.552-201ENST00000384665 112 ntBASIC0.09□□□□□ -2.4
CCDC197Q8NCU1 MIR206-201ENST00000384872 86 ntBASIC0.09□□□□□ -2.4
CCDC197Q8NCU1 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
CCDC197Q8NCU1 Y_RNA.676-201ENST00000516393 96 ntBASIC0.09□□□□□ -2.4
CCDC197Q8NCU1 RNY4P20-201ENST00000516678 93 ntBASIC0.09□□□□□ -2.4
CCDC197Q8NCU1 RNU6-388P-201ENST00000517012 105 ntBASIC0.09□□□□□ -2.4
CCDC197Q8NCU1 RNU6-389P-201ENST00000517048 105 ntBASIC0.09□□□□□ -2.4
CCDC197Q8NCU1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.09□□□□□ -2.4
CCDC197Q8NCU1 SNORD115-24-201ENST00000363528 82 ntBASIC0.08□□□□□ -2.4
CCDC197Q8NCU1 SNORD114-23-201ENST00000363536 72 ntBASIC0.08□□□□□ -2.4
CCDC197Q8NCU1 Y_RNA.272-201ENST00000364696 102 ntBASIC0.08□□□□□ -2.4
CCDC197Q8NCU1 Y_RNA.423-201ENST00000384057 113 ntBASIC0.08□□□□□ -2.4
CCDC197Q8NCU1 Y_RNA.662-201ENST00000516028 97 ntBASIC0.08□□□□□ -2.4
CCDC197Q8NCU1 AC138869.1-201ENST00000568623 124 ntBASIC0.08□□□□□ -2.4
CCDC197Q8NCU1 AC108081.1-201ENST00000604358 221 ntBASIC0.08□□□□□ -2.4
CCDC197Q8NCU1 RNU1-29P-201ENST00000606574 126 ntBASIC0.08□□□□□ -2.4
CCDC197Q8NCU1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
CCDC197Q8NCU1 Y_RNA.49-201ENST00000362714 112 ntBASIC0.07□□□□□ -2.4
CCDC197Q8NCU1 PCNPP3-201ENST00000393579 471 ntBASIC0.07□□□□□ -2.4
CCDC197Q8NCU1 AC108059.2-201ENST00000434626 151 ntBASIC0.07□□□□□ -2.4
CCDC197Q8NCU1 RNU7-48P-201ENST00000458875 63 ntBASIC0.07□□□□□ -2.4
CCDC197Q8NCU1 Y_RNA.700-201ENST00000516806 100 ntBASIC0.07□□□□□ -2.4
CCDC197Q8NCU1 MIR548H5-201ENST00000580314 60 ntBASIC0.07□□□□□ -2.4
CCDC197Q8NCU1 AL137067.1-201ENST00000615933 120 ntBASIC0.07□□□□□ -2.4
CCDC197Q8NCU1 RNU6-726P-201ENST00000364680 107 ntBASIC0.06□□□□□ -2.4
CCDC197Q8NCU1 RNU6-716P-201ENST00000365621 103 ntBASIC0.06□□□□□ -2.4
CCDC197Q8NCU1 Y_RNA.448-201ENST00000384185 108 ntBASIC0.06□□□□□ -2.4
CCDC197Q8NCU1 RNU6-1307P-201ENST00000391012 103 ntBASIC0.06□□□□□ -2.4
CCDC197Q8NCU1 RNU7-197P-201ENST00000458836 62 ntBASIC0.06□□□□□ -2.4
CCDC197Q8NCU1 SNORA62.5-201ENST00000516634 120 ntBASIC0.06□□□□□ -2.4
CCDC197Q8NCU1 RNU7-161P-201ENST00000517289 62 ntBASIC0.06□□□□□ -2.4
CCDC197Q8NCU1 MIR924-201ENST00000638017 53 ntBASIC0.06□□□□□ -2.4
CCDC197Q8NCU1 Y_RNA.29-201ENST00000362570 113 ntBASIC0.05□□□□□ -2.4
CCDC197Q8NCU1 RNU4-11P-201ENST00000365287 132 ntBASIC0.05□□□□□ -2.4
CCDC197Q8NCU1 Y_RNA.476-201ENST00000384347 108 ntBASIC0.05□□□□□ -2.4
CCDC197Q8NCU1 RNU6-1104P-201ENST00000384723 104 ntBASIC0.05□□□□□ -2.4
CCDC197Q8NCU1 MIR760-201ENST00000390220 80 ntBASIC0.05□□□□□ -2.4
CCDC197Q8NCU1 SNORD77B-201ENST00000391112 67 ntBASIC0.05□□□□□ -2.4
CCDC197Q8NCU1 MIR4752-201ENST00000579672 72 ntBASIC0.05□□□□□ -2.4
CCDC197Q8NCU1 RNU7-10P-201ENST00000607194 63 ntBASIC0.05□□□□□ -2.4
CCDC197Q8NCU1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.05□□□□□ -2.4
CCDC197Q8NCU1 RNA5SP403-201ENST00000363598 108 ntBASIC0.04□□□□□ -2.4
CCDC197Q8NCU1 Y_RNA.362-201ENST00000365518 110 ntBASIC0.04□□□□□ -2.4
CCDC197Q8NCU1 SNORA81.3-201ENST00000517283 198 ntBASIC0.04□□□□□ -2.4
CCDC197Q8NCU1 AL162376.1-201ENST00000624117 175 ntBASIC0.04□□□□□ -2.4
CCDC197Q8NCU1 AP001362.1-201ENST00000625165 124 ntBASIC0.04□□□□□ -2.4
CCDC197Q8NCU1 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
CCDC197Q8NCU1 RNA5SP128-201ENST00000365305 116 ntBASIC0.03□□□□□ -2.4
CCDC197Q8NCU1 RNU6-449P-201ENST00000383914 107 ntBASIC0.03□□□□□ -2.4
CCDC197Q8NCU1 Y_RNA.785-201ENST00000384290 109 ntBASIC0.03□□□□□ -2.4
CCDC197Q8NCU1 RNU6-127P-201ENST00000390897 107 ntBASIC0.03□□□□□ -2.4
CCDC197Q8NCU1 MIR1287-201ENST00000408492 90 ntBASIC0.03□□□□□ -2.4
CCDC197Q8NCU1 TRAJ51-201ENST00000504127 63 ntBASIC0.03□□□□□ -2.4
CCDC197Q8NCU1 AC074198.2-201ENST00000508153 258 ntBASIC0.03□□□□□ -2.4
CCDC197Q8NCU1 RNU7-2P-201ENST00000516096 62 ntBASIC0.03□□□□□ -2.4
CCDC197Q8NCU1 MIR4500-201ENST00000579472 76 ntBASIC0.03□□□□□ -2.4
CCDC197Q8NCU1 AC104408.1-201ENST00000605241 170 ntBASIC0.03□□□□□ -2.4
CCDC197Q8NCU1 MIR6515-201ENST00000619843 57 ntBASIC0.03□□□□□ -2.4
CCDC197Q8NCU1 Y_RNA.98-201ENST00000363109 102 ntBASIC0.02□□□□□ -2.41
CCDC197Q8NCU1 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
CCDC197Q8NCU1 Y_RNA.127-201ENST00000363386 109 ntBASIC0.02□□□□□ -2.41
CCDC197Q8NCU1 SNORA2A-201ENST00000383885 135 ntBASIC0.02□□□□□ -2.41
CCDC197Q8NCU1 AL078595.1-201ENST00000404458 226 ntBASIC0.02□□□□□ -2.41
CCDC197Q8NCU1 RNA5SP193-201ENST00000410353 107 ntBASIC0.02□□□□□ -2.41
CCDC197Q8NCU1 RNU7-104P-201ENST00000459398 79 ntBASIC0.02□□□□□ -2.41
CCDC197Q8NCU1 RNU7-129P-201ENST00000516128 62 ntBASIC0.02□□□□□ -2.41
CCDC197Q8NCU1 AC004792.1-201ENST00000614523 137 ntBASIC0.02□□□□□ -2.41
CCDC197Q8NCU1 Y_RNA.328-201ENST00000365208 113 ntBASIC0.01□□□□□ -2.41
CCDC197Q8NCU1 RNU6-616P-201ENST00000384353 107 ntBASIC0.01□□□□□ -2.41
CCDC197Q8NCU1 MIR635-201ENST00000384830 98 ntBASIC0.01□□□□□ -2.41
CCDC197Q8NCU1 MIR518E-201ENST00000385252 88 ntBASIC0.01□□□□□ -2.41
CCDC197Q8NCU1 AC097635.1-201ENST00000450678 155 ntBASIC0.01□□□□□ -2.41
CCDC197Q8NCU1 RPL39P34-201ENST00000477141 156 ntBASIC0.01□□□□□ -2.41
CCDC197Q8NCU1 IGKV1-22-201ENST00000524313 326 ntBASIC0.01□□□□□ -2.41
CCDC197Q8NCU1 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
CCDC197Q8NCU1 MIR3121-201ENST00000579680 77 ntBASIC0.01□□□□□ -2.41
CCDC197Q8NCU1 Y_RNA.778-201ENST00000620203 90 ntBASIC0.01□□□□□ -2.41
CCDC197Q8NCU1 Y_RNA.116-201ENST00000363292 103 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms