Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 Y_RNA.617-201ENST00000410920 90 ntBASIC0.7□□□□□ -2.3
USP38Q8NB14 RNU7-123P-201ENST00000515911 60 ntBASIC0.7□□□□□ -2.3
USP38Q8NB14 RNU6-448P-201ENST00000517052 107 ntBASIC0.7□□□□□ -2.3
USP38Q8NB14 DEFB131E-201ENST00000532329 154 ntBASIC0.7□□□□□ -2.3
USP38Q8NB14 MIR4491-201ENST00000581087 68 ntBASIC0.7□□□□□ -2.3
USP38Q8NB14 MIR4514-201ENST00000581410 57 ntBASIC0.7□□□□□ -2.3
USP38Q8NB14 AC067863.3-201ENST00000624172 122 ntBASIC0.7□□□□□ -2.3
USP38Q8NB14 MIR6759-201ENST00000638110 65 ntBASIC0.7□□□□□ -2.3
USP38Q8NB14 MIR18A-201ENST00000362310 71 ntBASIC0.69□□□□□ -2.3
USP38Q8NB14 Y_RNA.170-201ENST00000363746 110 ntBASIC0.69□□□□□ -2.3
USP38Q8NB14 Y_RNA.215-201ENST00000364204 112 ntBASIC0.69□□□□□ -2.3
USP38Q8NB14 Y_RNA.400-201ENST00000383963 111 ntBASIC0.69□□□□□ -2.3
USP38Q8NB14 RNU6-679P-201ENST00000391003 106 ntBASIC0.69□□□□□ -2.3
USP38Q8NB14 RNU6-255P-201ENST00000516957 105 ntBASIC0.69□□□□□ -2.3
USP38Q8NB14 MIR3121-201ENST00000579680 77 ntBASIC0.69□□□□□ -2.3
USP38Q8NB14 MIR548X2-201ENST00000579776 100 ntBASIC0.69□□□□□ -2.3
USP38Q8NB14 SNORD115-2-201ENST00000362842 82 ntBASIC0.68□□□□□ -2.3
USP38Q8NB14 SNORD115-20-201ENST00000365099 82 ntBASIC0.68□□□□□ -2.3
USP38Q8NB14 MIR569-201ENST00000385228 96 ntBASIC0.68□□□□□ -2.3
USP38Q8NB14 MT-TR-201ENST00000387439 65 ntBASIC0.68□□□□□ -2.3
USP38Q8NB14 MIR1270-201ENST00000459320 83 ntBASIC0.68□□□□□ -2.3
USP38Q8NB14 RNU7-35P-201ENST00000517174 62 ntBASIC0.68□□□□□ -2.3
USP38Q8NB14 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.68□□□□□ -2.3
USP38Q8NB14 MIR3668-201ENST00000582138 75 ntBASIC0.68□□□□□ -2.3
USP38Q8NB14 MIR6082-201ENST00000613604 109 ntBASIC0.68□□□□□ -2.3
USP38Q8NB14 AL137067.1-201ENST00000615933 120 ntBASIC0.68□□□□□ -2.3
USP38Q8NB14 MIR8066-201ENST00000617280 78 ntBASIC0.68□□□□□ -2.3
USP38Q8NB14 Y_RNA.298-201ENST00000364960 107 ntBASIC0.67□□□□□ -2.3
USP38Q8NB14 Y_RNA.420-201ENST00000384043 110 ntBASIC0.67□□□□□ -2.3
USP38Q8NB14 RNU6-1104P-201ENST00000384723 104 ntBASIC0.67□□□□□ -2.3
USP38Q8NB14 MIR140-201ENST00000385282 100 ntBASIC0.67□□□□□ -2.3
USP38Q8NB14 Y_RNA.588-201ENST00000391254 102 ntBASIC0.67□□□□□ -2.3
USP38Q8NB14 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.67□□□□□ -2.3
USP38Q8NB14 AC002350.1-201ENST00000490759 375 ntBASIC0.67□□□□□ -2.3
USP38Q8NB14 Y_RNA.692-201ENST00000516627 105 ntBASIC0.67□□□□□ -2.3
USP38Q8NB14 IGKV1-22-201ENST00000524313 326 ntBASIC0.67□□□□□ -2.3
USP38Q8NB14 Y_RNA.464-201ENST00000384282 110 ntBASIC0.66□□□□□ -2.3
USP38Q8NB14 RNA5SP63-201ENST00000391225 112 ntBASIC0.66□□□□□ -2.3
USP38Q8NB14 SNORD100-201ENST00000408573 76 ntBASIC0.66□□□□□ -2.3
USP38Q8NB14 RNU7-200P-201ENST00000516105 62 ntBASIC0.66□□□□□ -2.3
USP38Q8NB14 RNU6-346P-201ENST00000516288 111 ntBASIC0.66□□□□□ -2.3
USP38Q8NB14 SNORA25.16-201ENST00000516741 121 ntBASIC0.66□□□□□ -2.3
USP38Q8NB14 AP001328.1-201ENST00000528550 176 ntBASIC0.66□□□□□ -2.3
USP38Q8NB14 AC022523.2-201ENST00000561045 150 ntBASIC0.66□□□□□ -2.3
USP38Q8NB14 Y_RNA.42-201ENST00000362660 108 ntBASIC0.65□□□□□ -2.31
USP38Q8NB14 RNU6-426P-201ENST00000516464 97 ntBASIC0.65□□□□□ -2.31
USP38Q8NB14 SNORD67.1-201ENST00000516618 108 ntBASIC0.65□□□□□ -2.31
USP38Q8NB14 RNY4P20-201ENST00000516678 93 ntBASIC0.65□□□□□ -2.31
USP38Q8NB14 RNU6-1212P-201ENST00000517023 104 ntBASIC0.65□□□□□ -2.31
USP38Q8NB14 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.65□□□□□ -2.31
USP38Q8NB14 AL359881.1-201ENST00000602916 267 ntBASIC0.65□□□□□ -2.31
USP38Q8NB14 AC105081.1-201ENST00000617727 106 ntBASIC0.65□□□□□ -2.31
USP38Q8NB14 MIR5087-201ENST00000635826 76 ntBASIC0.65□□□□□ -2.31
USP38Q8NB14 RNA5SP133-201ENST00000363368 119 ntBASIC0.64□□□□□ -2.31
USP38Q8NB14 RNU6-945P-201ENST00000383947 107 ntBASIC0.64□□□□□ -2.31
USP38Q8NB14 Y_RNA.506-201ENST00000384494 102 ntBASIC0.64□□□□□ -2.31
USP38Q8NB14 MIR548I1-201ENST00000408810 149 ntBASIC0.64□□□□□ -2.31
USP38Q8NB14 RNU4-54P-201ENST00000516428 129 ntBASIC0.64□□□□□ -2.31
USP38Q8NB14 AP001340.1-201ENST00000624405 217 ntBASIC0.64□□□□□ -2.31
USP38Q8NB14 U6.109-201ENST00000636749 87 ntBASIC0.64□□□□□ -2.31
USP38Q8NB14 Y_RNA.114-201ENST00000363265 113 ntBASIC0.63□□□□□ -2.31
USP38Q8NB14 Y_RNA.299-201ENST00000364973 94 ntBASIC0.63□□□□□ -2.31
USP38Q8NB14 RNU4-45P-201ENST00000365469 141 ntBASIC0.63□□□□□ -2.31
USP38Q8NB14 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
USP38Q8NB14 RNU4-69P-201ENST00000410677 143 ntBASIC0.63□□□□□ -2.31
USP38Q8NB14 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.63□□□□□ -2.31
USP38Q8NB14 RNU6-469P-201ENST00000516253 101 ntBASIC0.63□□□□□ -2.31
USP38Q8NB14 SNORA62.5-201ENST00000516634 120 ntBASIC0.63□□□□□ -2.31
USP38Q8NB14 Y_RNA.697-201ENST00000516776 113 ntBASIC0.63□□□□□ -2.31
USP38Q8NB14 Y_RNA.488-201ENST00000384403 102 ntBASIC0.62□□□□□ -2.31
USP38Q8NB14 MT-TI-201ENST00000387365 69 ntBASIC0.62□□□□□ -2.31
USP38Q8NB14 SNORD77B-201ENST00000391112 67 ntBASIC0.62□□□□□ -2.31
USP38Q8NB14 MIR1912-201ENST00000410389 80 ntBASIC0.62□□□□□ -2.31
USP38Q8NB14 RNU6-531P-201ENST00000516694 104 ntBASIC0.62□□□□□ -2.31
USP38Q8NB14 RNU7-137P-201ENST00000516788 62 ntBASIC0.62□□□□□ -2.31
USP38Q8NB14 AC243829.6-201ENST00000612652 106 ntBASIC0.62□□□□□ -2.31
USP38Q8NB14 RNU6-209P-201ENST00000384118 107 ntBASIC0.61□□□□□ -2.31
USP38Q8NB14 RNU6-1194P-201ENST00000516208 104 ntBASIC0.61□□□□□ -2.31
USP38Q8NB14 AC018659.1-201ENST00000551083 169 ntBASIC0.61□□□□□ -2.31
USP38Q8NB14 MTND5P34-201ENST00000568888 325 ntBASIC0.61□□□□□ -2.31
USP38Q8NB14 MIR3678-201ENST00000578455 94 ntBASIC0.61□□□□□ -2.31
USP38Q8NB14 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.61□□□□□ -2.31
USP38Q8NB14 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
USP38Q8NB14 RNU6-535P-201ENST00000384722 107 ntBASIC0.6□□□□□ -2.31
USP38Q8NB14 MIR644A-201ENST00000385262 94 ntBASIC0.6□□□□□ -2.31
USP38Q8NB14 RNU6-765P-201ENST00000516916 99 ntBASIC0.6□□□□□ -2.31
USP38Q8NB14 AP003327.1-201ENST00000529684 127 ntBASIC0.6□□□□□ -2.31
USP38Q8NB14 MIR4802-201ENST00000581881 80 ntBASIC0.6□□□□□ -2.31
USP38Q8NB14 RNU4-58P-201ENST00000363192 141 ntBASIC0.59□□□□□ -2.31
USP38Q8NB14 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
USP38Q8NB14 MTND4LP9-201ENST00000427694 174 ntBASIC0.59□□□□□ -2.31
USP38Q8NB14 RN7SKP19-201ENST00000516016 252 ntBASIC0.59□□□□□ -2.31
USP38Q8NB14 AC023932.2-201ENST00000603176 175 ntBASIC0.59□□□□□ -2.31
USP38Q8NB14 AC092634.7-201ENST00000621022 103 ntBASIC0.59□□□□□ -2.31
USP38Q8NB14 MIR101-2-201ENST00000362195 79 ntBASIC0.58□□□□□ -2.32
USP38Q8NB14 SNORD114-10-201ENST00000363409 72 ntBASIC0.58□□□□□ -2.32
USP38Q8NB14 Y_RNA.536-201ENST00000384621 113 ntBASIC0.58□□□□□ -2.32
USP38Q8NB14 MIR329-2-201ENST00000385029 84 ntBASIC0.58□□□□□ -2.32
USP38Q8NB14 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
USP38Q8NB14 RNU6-235P-201ENST00000362644 107 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms