Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNU1-36P-201ENST00000365130 165 ntBASIC2.37□□□□□ -2.03
CCDC116Q8IYX3 Y_RNA.536-201ENST00000384621 113 ntBASIC2.37□□□□□ -2.03
CCDC116Q8IYX3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CCDC116Q8IYX3 RNA5SP184-201ENST00000411071 108 ntBASIC2.37□□□□□ -2.03
CCDC116Q8IYX3 RNA5SP508-201ENST00000411327 119 ntBASIC2.37□□□□□ -2.03
CCDC116Q8IYX3 MIR18B-201ENST00000454574 71 ntBASIC2.37□□□□□ -2.03
CCDC116Q8IYX3 AC055731.1-201ENST00000474387 401 ntBASIC2.37□□□□□ -2.03
CCDC116Q8IYX3 AL133373.1-201ENST00000497098 94 ntBASIC2.37□□□□□ -2.03
CCDC116Q8IYX3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC116Q8IYX3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CCDC116Q8IYX3 MIR101-2-201ENST00000362195 79 ntBASIC2.36□□□□□ -2.03
CCDC116Q8IYX3 Y_RNA.386-201ENST00000383913 105 ntBASIC2.36□□□□□ -2.03
CCDC116Q8IYX3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CCDC116Q8IYX3 snoU13.17-201ENST00000458802 104 ntBASIC2.36□□□□□ -2.03
CCDC116Q8IYX3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC116Q8IYX3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC116Q8IYX3 AC080100.1-201ENST00000624239 5356 ntBASIC2.35□□□□□ -2.03
CCDC116Q8IYX3 RNU4-82P-201ENST00000362443 140 ntBASIC2.35□□□□□ -2.03
CCDC116Q8IYX3 RNA5SP264-201ENST00000363115 107 ntBASIC2.35□□□□□ -2.03
CCDC116Q8IYX3 RNU6-1051P-201ENST00000365471 102 ntBASIC2.35□□□□□ -2.03
CCDC116Q8IYX3 RNU6-1241P-201ENST00000384536 107 ntBASIC2.35□□□□□ -2.03
CCDC116Q8IYX3 RNU6-540P-201ENST00000384622 101 ntBASIC2.35□□□□□ -2.03
CCDC116Q8IYX3 MIR27B-201ENST00000385129 97 ntBASIC2.35□□□□□ -2.03
CCDC116Q8IYX3 RNA5SP212-201ENST00000391223 107 ntBASIC2.35□□□□□ -2.03
CCDC116Q8IYX3 SNORD30.1-201ENST00000391309 70 ntBASIC2.35□□□□□ -2.03
CCDC116Q8IYX3 TRDV1-202ENST00000621643 102 ntBASIC2.35□□□□□ -2.03
CCDC116Q8IYX3 RNA5SP456-201ENST00000364002 114 ntBASIC2.34□□□□□ -2.03
CCDC116Q8IYX3 RNU6-580P-201ENST00000365159 107 ntBASIC2.34□□□□□ -2.03
CCDC116Q8IYX3 MIR17-201ENST00000385012 84 ntBASIC2.34□□□□□ -2.03
CCDC116Q8IYX3 MIR519A1-201ENST00000385257 85 ntBASIC2.34□□□□□ -2.03
CCDC116Q8IYX3 AL606490.4-201ENST00000423117 127 ntBASIC2.34□□□□□ -2.03
CCDC116Q8IYX3 MIR514B-201ENST00000516774 80 ntBASIC2.34□□□□□ -2.03
CCDC116Q8IYX3 RNA5SP402-201ENST00000517148 110 ntBASIC2.34□□□□□ -2.03
CCDC116Q8IYX3 SNORA77B-201ENST00000578179 125 ntBASIC2.34□□□□□ -2.03
CCDC116Q8IYX3 MIR548H5-201ENST00000580314 60 ntBASIC2.34□□□□□ -2.03
CCDC116Q8IYX3 AC013244.2-201ENST00000603396 103 ntBASIC2.34□□□□□ -2.03
CCDC116Q8IYX3 RNU7-10P-201ENST00000607194 63 ntBASIC2.34□□□□□ -2.03
CCDC116Q8IYX3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
CCDC116Q8IYX3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.04
CCDC116Q8IYX3 RNA5SP68-201ENST00000363885 119 ntBASIC2.33□□□□□ -2.04
CCDC116Q8IYX3 Y_RNA.239-201ENST00000364444 113 ntBASIC2.33□□□□□ -2.04
CCDC116Q8IYX3 SNORA8.1-201ENST00000384250 140 ntBASIC2.33□□□□□ -2.04
CCDC116Q8IYX3 MIR154-201ENST00000385243 84 ntBASIC2.33□□□□□ -2.04
CCDC116Q8IYX3 RNU2-59P-201ENST00000410482 191 ntBASIC2.33□□□□□ -2.04
CCDC116Q8IYX3 Y_RNA.809-201ENST00000516058 95 ntBASIC2.33□□□□□ -2.04
CCDC116Q8IYX3 RNA5SP320-201ENST00000516263 124 ntBASIC2.33□□□□□ -2.04
CCDC116Q8IYX3 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.33□□□□□ -2.04
CCDC116Q8IYX3 Y_RNA.36-201ENST00000362602 112 ntBASIC2.32□□□□□ -2.04
CCDC116Q8IYX3 Y_RNA.207-201ENST00000364142 106 ntBASIC2.32□□□□□ -2.04
CCDC116Q8IYX3 SNORD53-201ENST00000579969 78 ntBASIC2.32□□□□□ -2.04
CCDC116Q8IYX3 MIR4524B-201ENST00000581569 115 ntBASIC2.32□□□□□ -2.04
CCDC116Q8IYX3 SNRPGP19-201ENST00000603826 189 ntBASIC2.32□□□□□ -2.04
CCDC116Q8IYX3 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.32□□□□□ -2.04
CCDC116Q8IYX3 MIR7843-201ENST00000622274 79 ntBASIC2.32□□□□□ -2.04
CCDC116Q8IYX3 Y_RNA.42-201ENST00000362660 108 ntBASIC2.31□□□□□ -2.04
CCDC116Q8IYX3 SNORA16B-201ENST00000364674 135 ntBASIC2.31□□□□□ -2.04
CCDC116Q8IYX3 DEFA7P-201ENST00000382676 285 ntBASIC2.31□□□□□ -2.04
CCDC116Q8IYX3 MIR504-201ENST00000385065 83 ntBASIC2.31□□□□□ -2.04
CCDC116Q8IYX3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CCDC116Q8IYX3 RPS27P16-201ENST00000425758 201 ntBASIC2.31□□□□□ -2.04
CCDC116Q8IYX3 RNA5SP148-201ENST00000516527 94 ntBASIC2.31□□□□□ -2.04
CCDC116Q8IYX3 MIR4769-201ENST00000584126 77 ntBASIC2.31□□□□□ -2.04
CCDC116Q8IYX3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.31□□□□□ -2.04
CCDC116Q8IYX3 MIR6817-201ENST00000615588 66 ntBASIC2.31□□□□□ -2.04
CCDC116Q8IYX3 AC023934.1-201ENST00000574529 2389 ntBASIC2.3□□□□□ -2.04
CCDC116Q8IYX3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC116Q8IYX3 RNU6-1260P-201ENST00000362944 107 ntBASIC2.3□□□□□ -2.04
CCDC116Q8IYX3 RNU6-330P-201ENST00000363015 107 ntBASIC2.3□□□□□ -2.04
CCDC116Q8IYX3 Y_RNA.371-201ENST00000365591 113 ntBASIC2.3□□□□□ -2.04
CCDC116Q8IYX3 RNU6-154P-201ENST00000384306 106 ntBASIC2.3□□□□□ -2.04
CCDC116Q8IYX3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CCDC116Q8IYX3 MIR942-201ENST00000401111 86 ntBASIC2.3□□□□□ -2.04
CCDC116Q8IYX3 AL356379.1-201ENST00000414105 126 ntBASIC2.3□□□□□ -2.04
CCDC116Q8IYX3 RNA5SP233-201ENST00000459153 113 ntBASIC2.3□□□□□ -2.04
CCDC116Q8IYX3 RNU7-185P-201ENST00000459215 60 ntBASIC2.3□□□□□ -2.04
CCDC116Q8IYX3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC116Q8IYX3 U6.111-201ENST00000636093 83 ntBASIC2.3□□□□□ -2.04
CCDC116Q8IYX3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC116Q8IYX3 ZNF209P-201ENST00000593450 2304 ntBASIC2.29□□□□□ -2.04
CCDC116Q8IYX3 Y_RNA.13-201ENST00000362403 112 ntBASIC2.29□□□□□ -2.04
CCDC116Q8IYX3 Y_RNA.56-201ENST00000362798 112 ntBASIC2.29□□□□□ -2.04
CCDC116Q8IYX3 Y_RNA.205-201ENST00000364128 113 ntBASIC2.29□□□□□ -2.04
CCDC116Q8IYX3 RNY4P3-201ENST00000365254 95 ntBASIC2.29□□□□□ -2.04
CCDC116Q8IYX3 SNORD115-31-201ENST00000365318 82 ntBASIC2.29□□□□□ -2.04
CCDC116Q8IYX3 SNORA70B-201ENST00000384210 135 ntBASIC2.29□□□□□ -2.04
CCDC116Q8IYX3 RNU6-800P-201ENST00000384473 103 ntBASIC2.29□□□□□ -2.04
CCDC116Q8IYX3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.29□□□□□ -2.04
CCDC116Q8IYX3 AC092628.1-201ENST00000436250 252 ntBASIC2.29□□□□□ -2.04
CCDC116Q8IYX3 MIR6082-201ENST00000613604 109 ntBASIC2.29□□□□□ -2.04
CCDC116Q8IYX3 U6.100-201ENST00000636230 99 ntBASIC2.29□□□□□ -2.04
CCDC116Q8IYX3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
CCDC116Q8IYX3 RNU6-664P-201ENST00000362381 107 ntBASIC2.28□□□□□ -2.04
CCDC116Q8IYX3 RNU6-340P-201ENST00000364005 107 ntBASIC2.28□□□□□ -2.04
CCDC116Q8IYX3 SNORD101-201ENST00000384027 73 ntBASIC2.28□□□□□ -2.04
CCDC116Q8IYX3 RNU6-291P-201ENST00000384720 107 ntBASIC2.28□□□□□ -2.04
CCDC116Q8IYX3 RNU6-663P-201ENST00000391105 106 ntBASIC2.28□□□□□ -2.04
CCDC116Q8IYX3 AL359511.1-201ENST00000402970 211 ntBASIC2.28□□□□□ -2.04
CCDC116Q8IYX3 MIR1257-201ENST00000408490 117 ntBASIC2.28□□□□□ -2.04
CCDC116Q8IYX3 RNA5SP181-201ENST00000410246 98 ntBASIC2.28□□□□□ -2.04
CCDC116Q8IYX3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 228.1 ms