Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
HERC6Q8IVU3 Y_RNA.299-201ENST00000364973 94 ntBASIC0.86□□□□□ -2.27
HERC6Q8IVU3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.86□□□□□ -2.27
HERC6Q8IVU3 RNU6-949P-201ENST00000384040 107 ntBASIC0.86□□□□□ -2.27
HERC6Q8IVU3 MIR1257-201ENST00000408490 117 ntBASIC0.86□□□□□ -2.27
HERC6Q8IVU3 AL606753.1-201ENST00000427435 87 ntBASIC0.86□□□□□ -2.27
HERC6Q8IVU3 RNU7-185P-201ENST00000459215 60 ntBASIC0.86□□□□□ -2.27
HERC6Q8IVU3 COX6CP6-201ENST00000490840 228 ntBASIC0.86□□□□□ -2.27
HERC6Q8IVU3 RNU6-1333P-201ENST00000516162 93 ntBASIC0.86□□□□□ -2.27
HERC6Q8IVU3 SNORD67.1-201ENST00000516618 108 ntBASIC0.86□□□□□ -2.27
HERC6Q8IVU3 RNU7-6P-201ENST00000516845 62 ntBASIC0.86□□□□□ -2.27
HERC6Q8IVU3 MIR4676-201ENST00000583078 72 ntBASIC0.86□□□□□ -2.27
HERC6Q8IVU3 MIR6835-201ENST00000621552 64 ntBASIC0.86□□□□□ -2.27
HERC6Q8IVU3 AC023934.1-201ENST00000574529 2389 ntBASIC0.86□□□□□ -2.27
HERC6Q8IVU3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
HERC6Q8IVU3 SNORD114-23-201ENST00000363536 72 ntBASIC0.85□□□□□ -2.27
HERC6Q8IVU3 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
HERC6Q8IVU3 MIR508-201ENST00000384857 115 ntBASIC0.85□□□□□ -2.27
HERC6Q8IVU3 MIR938-201ENST00000401216 83 ntBASIC0.85□□□□□ -2.27
HERC6Q8IVU3 Y_RNA.773-201ENST00000607168 90 ntBASIC0.85□□□□□ -2.27
HERC6Q8IVU3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RNU6-22P-201ENST00000384355 107 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RNU6-364P-201ENST00000384387 107 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RNU1-119P-201ENST00000391122 165 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RNU6-447P-201ENST00000410293 104 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RNU6-1118P-201ENST00000410382 104 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RNU6-1076P-201ENST00000410397 104 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RNU6-355P-201ENST00000410427 104 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RNU6-791P-201ENST00000410467 104 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RNU6-705P-201ENST00000410601 104 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RNU6-1100P-201ENST00000410691 104 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RNU6-860P-201ENST00000410860 104 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RNU6-1217P-201ENST00000411276 104 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RNU6-785P-201ENST00000411324 104 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RNU7-137P-201ENST00000516788 62 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 RNU6-789P-201ENST00000517105 102 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 MIR4804-201ENST00000581683 73 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 MIR4653-201ENST00000585107 83 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 U6.90-201ENST00000614007 104 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 U6.70-201ENST00000620287 104 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 AC010487.4-201ENST00000637027 61 ntBASIC0.84□□□□□ -2.27
HERC6Q8IVU3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.83□□□□□ -2.28
HERC6Q8IVU3 Y_RNA.346-201ENST00000365385 112 ntBASIC0.83□□□□□ -2.28
HERC6Q8IVU3 RNU6-616P-201ENST00000384353 107 ntBASIC0.83□□□□□ -2.28
HERC6Q8IVU3 RNU6-1117P-201ENST00000384525 104 ntBASIC0.83□□□□□ -2.28
HERC6Q8IVU3 MIR125B2-201ENST00000385128 89 ntBASIC0.83□□□□□ -2.28
HERC6Q8IVU3 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
HERC6Q8IVU3 RNU6-1307P-201ENST00000391012 103 ntBASIC0.83□□□□□ -2.28
HERC6Q8IVU3 RNU7-56P-201ENST00000458744 62 ntBASIC0.83□□□□□ -2.28
HERC6Q8IVU3 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
HERC6Q8IVU3 AC011195.1-201ENST00000578177 177 ntBASIC0.83□□□□□ -2.28
HERC6Q8IVU3 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
HERC6Q8IVU3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.83□□□□□ -2.28
HERC6Q8IVU3 AC105081.1-201ENST00000617727 106 ntBASIC0.83□□□□□ -2.28
HERC6Q8IVU3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
HERC6Q8IVU3 Y_RNA.344-201ENST00000365381 112 ntBASIC0.82□□□□□ -2.28
HERC6Q8IVU3 Y_RNA.353-201ENST00000365440 108 ntBASIC0.82□□□□□ -2.28
HERC6Q8IVU3 Y_RNA.563-201ENST00000384707 108 ntBASIC0.82□□□□□ -2.28
HERC6Q8IVU3 MIR520H-201ENST00000385126 88 ntBASIC0.82□□□□□ -2.28
HERC6Q8IVU3 RNU6-1168P-201ENST00000390831 104 ntBASIC0.82□□□□□ -2.28
HERC6Q8IVU3 Y_RNA.588-201ENST00000391254 102 ntBASIC0.82□□□□□ -2.28
HERC6Q8IVU3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
HERC6Q8IVU3 SNORD93-201ENST00000408813 74 ntBASIC0.82□□□□□ -2.28
HERC6Q8IVU3 AC008267.6-201ENST00000441664 139 ntBASIC0.82□□□□□ -2.28
HERC6Q8IVU3 SNORD33.1-201ENST00000516213 88 ntBASIC0.82□□□□□ -2.28
HERC6Q8IVU3 MIR4491-201ENST00000581087 68 ntBASIC0.82□□□□□ -2.28
HERC6Q8IVU3 MIR3163-201ENST00000581592 73 ntBASIC0.82□□□□□ -2.28
HERC6Q8IVU3 MIR1255B1-201ENST00000636325 63 ntBASIC0.82□□□□□ -2.28
HERC6Q8IVU3 MIR924-201ENST00000638017 53 ntBASIC0.82□□□□□ -2.28
HERC6Q8IVU3 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
HERC6Q8IVU3 SNORD114-10-201ENST00000363409 72 ntBASIC0.81□□□□□ -2.28
HERC6Q8IVU3 Y_RNA.213-201ENST00000364178 111 ntBASIC0.81□□□□□ -2.28
HERC6Q8IVU3 SNORA19-201ENST00000384737 128 ntBASIC0.81□□□□□ -2.28
HERC6Q8IVU3 MIR548D2-201ENST00000384955 97 ntBASIC0.81□□□□□ -2.28
HERC6Q8IVU3 RNA5SP330-201ENST00000517096 96 ntBASIC0.81□□□□□ -2.28
HERC6Q8IVU3 RNU7-156P-201ENST00000517214 74 ntBASIC0.81□□□□□ -2.28
HERC6Q8IVU3 AC008608.1-201ENST00000603910 127 ntBASIC0.81□□□□□ -2.28
HERC6Q8IVU3 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
HERC6Q8IVU3 SNORD115-19-201ENST00000363098 82 ntBASIC0.8□□□□□ -2.28
HERC6Q8IVU3 SNORD115-18-201ENST00000363293 82 ntBASIC0.8□□□□□ -2.28
HERC6Q8IVU3 SNORD115-17-201ENST00000364612 82 ntBASIC0.8□□□□□ -2.28
HERC6Q8IVU3 MIR206-201ENST00000384872 86 ntBASIC0.8□□□□□ -2.28
HERC6Q8IVU3 MIR759-201ENST00000390224 91 ntBASIC0.8□□□□□ -2.28
HERC6Q8IVU3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
HERC6Q8IVU3 RNU6-1321P-201ENST00000390905 107 ntBASIC0.8□□□□□ -2.28
HERC6Q8IVU3 RNA5SP193-201ENST00000410353 107 ntBASIC0.8□□□□□ -2.28
HERC6Q8IVU3 MIR4711-201ENST00000578274 70 ntBASIC0.8□□□□□ -2.28
HERC6Q8IVU3 MIR8066-201ENST00000617280 78 ntBASIC0.8□□□□□ -2.28
HERC6Q8IVU3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HERC6Q8IVU3 RNA5SP205-201ENST00000364653 136 ntBASIC0.79□□□□□ -2.28
HERC6Q8IVU3 RNU4-45P-201ENST00000365469 141 ntBASIC0.79□□□□□ -2.28
HERC6Q8IVU3 MIR548A1-201ENST00000385041 97 ntBASIC0.79□□□□□ -2.28
HERC6Q8IVU3 MIR605-201ENST00000385078 83 ntBASIC0.79□□□□□ -2.28
HERC6Q8IVU3 Y_RNA.649-201ENST00000459077 103 ntBASIC0.79□□□□□ -2.28
HERC6Q8IVU3 RNU6-62P-201ENST00000516526 102 ntBASIC0.79□□□□□ -2.28
HERC6Q8IVU3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.79□□□□□ -2.28
HERC6Q8IVU3 SNORD92-201ENST00000585078 85 ntBASIC0.79□□□□□ -2.28
HERC6Q8IVU3 U2.22-201ENST00000636441 106 ntBASIC0.79□□□□□ -2.28
HERC6Q8IVU3 RNY4P6-201ENST00000363667 96 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms