Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
RNF135Q8IUD6 SNORA25.3-201ENST00000363205 127 ntBASIC2.46□□□□□ -2.02
RNF135Q8IUD6 Y_RNA.118-201ENST00000363300 101 ntBASIC2.46□□□□□ -2.02
RNF135Q8IUD6 RNA5SP456-201ENST00000364002 114 ntBASIC2.46□□□□□ -2.02
RNF135Q8IUD6 SNORA64-201ENST00000384674 134 ntBASIC2.46□□□□□ -2.02
RNF135Q8IUD6 MIR17-201ENST00000385012 84 ntBASIC2.46□□□□□ -2.02
RNF135Q8IUD6 MIR1265-201ENST00000408444 86 ntBASIC2.46□□□□□ -2.02
RNF135Q8IUD6 RNU6-70P-201ENST00000516438 60 ntBASIC2.46□□□□□ -2.02
RNF135Q8IUD6 SNORA18.5-201ENST00000516616 101 ntBASIC2.46□□□□□ -2.02
RNF135Q8IUD6 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.46□□□□□ -2.02
RNF135Q8IUD6 MIR4536-1-201ENST00000583537 88 ntBASIC2.46□□□□□ -2.02
RNF135Q8IUD6 MIR1291-201ENST00000627649 87 ntBASIC2.46□□□□□ -2.02
RNF135Q8IUD6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RNF135Q8IUD6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
RNF135Q8IUD6 MIR563-201ENST00000385080 79 ntBASIC2.45□□□□□ -2.02
RNF135Q8IUD6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
RNF135Q8IUD6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.45□□□□□ -2.02
RNF135Q8IUD6 Y_RNA.681-201ENST00000516445 113 ntBASIC2.45□□□□□ -2.02
RNF135Q8IUD6 RNU6-807P-201ENST00000516805 107 ntBASIC2.45□□□□□ -2.02
RNF135Q8IUD6 MIR4264-201ENST00000583520 66 ntBASIC2.45□□□□□ -2.02
RNF135Q8IUD6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
RNF135Q8IUD6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.44□□□□□ -2.02
RNF135Q8IUD6 MIR6073-201ENST00000352083 89 ntBASIC2.44□□□□□ -2.02
RNF135Q8IUD6 MIR520H-201ENST00000385126 88 ntBASIC2.44□□□□□ -2.02
RNF135Q8IUD6 SNORD77.2-201ENST00000391045 68 ntBASIC2.44□□□□□ -2.02
RNF135Q8IUD6 RNU6-634P-201ENST00000459134 106 ntBASIC2.44□□□□□ -2.02
RNF135Q8IUD6 RNU6-687P-201ENST00000516443 89 ntBASIC2.44□□□□□ -2.02
RNF135Q8IUD6 RNU6-295P-201ENST00000516901 104 ntBASIC2.44□□□□□ -2.02
RNF135Q8IUD6 MIR6740-201ENST00000618268 113 ntBASIC2.44□□□□□ -2.02
RNF135Q8IUD6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RNF135Q8IUD6 AC016717.2-201ENST00000609089 5141 ntBASIC2.44□□□□□ -2.02
RNF135Q8IUD6 Y_RNA.119-201ENST00000363301 96 ntBASIC2.43□□□□□ -2.02
RNF135Q8IUD6 RNU6-132P-201ENST00000383863 107 ntBASIC2.43□□□□□ -2.02
RNF135Q8IUD6 RNA5SP402-201ENST00000517148 110 ntBASIC2.43□□□□□ -2.02
RNF135Q8IUD6 MIR3064-201ENST00000581130 66 ntBASIC2.43□□□□□ -2.02
RNF135Q8IUD6 AC104996.3-201ENST00000590718 94 ntBASIC2.43□□□□□ -2.02
RNF135Q8IUD6 MIR1297-201ENST00000637311 77 ntBASIC2.43□□□□□ -2.02
RNF135Q8IUD6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RNF135Q8IUD6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
RNF135Q8IUD6 SNORD36A-201ENST00000362874 73 ntBASIC2.42□□□□□ -2.02
RNF135Q8IUD6 RNU1-17P-201ENST00000363022 152 ntBASIC2.42□□□□□ -2.02
RNF135Q8IUD6 SNORA26.9-201ENST00000391322 122 ntBASIC2.42□□□□□ -2.02
RNF135Q8IUD6 snoU13.9-201ENST00000458927 103 ntBASIC2.42□□□□□ -2.02
RNF135Q8IUD6 snoU13.25-201ENST00000458945 104 ntBASIC2.42□□□□□ -2.02
RNF135Q8IUD6 RNU6-75P-201ENST00000515944 104 ntBASIC2.42□□□□□ -2.02
RNF135Q8IUD6 MIR2115-201ENST00000516657 100 ntBASIC2.42□□□□□ -2.02
RNF135Q8IUD6 AC121758.2-201ENST00000553271 193 ntBASIC2.42□□□□□ -2.02
RNF135Q8IUD6 AC080100.1-201ENST00000624239 5356 ntBASIC2.41□□□□□ -2.02
RNF135Q8IUD6 MIR21-201ENST00000362134 72 ntBASIC2.41□□□□□ -2.02
RNF135Q8IUD6 Y_RNA.283-201ENST00000364798 112 ntBASIC2.41□□□□□ -2.02
RNF135Q8IUD6 Y_RNA.386-201ENST00000383913 105 ntBASIC2.41□□□□□ -2.02
RNF135Q8IUD6 SNORA67.3-201ENST00000384366 140 ntBASIC2.41□□□□□ -2.02
RNF135Q8IUD6 MIR516A2-201ENST00000384888 90 ntBASIC2.41□□□□□ -2.02
RNF135Q8IUD6 MIR516A1-201ENST00000385033 90 ntBASIC2.41□□□□□ -2.02
RNF135Q8IUD6 MT-TN-201ENST00000387400 73 ntBASIC2.41□□□□□ -2.02
RNF135Q8IUD6 HMGN2P19-201ENST00000425149 265 ntBASIC2.41□□□□□ -2.02
RNF135Q8IUD6 RN7SL274P-201ENST00000492268 272 ntBASIC2.41□□□□□ -2.02
RNF135Q8IUD6 AC019176.1-201ENST00000518519 225 ntBASIC2.41□□□□□ -2.02
RNF135Q8IUD6 SNORA4-201ENST00000584302 138 ntBASIC2.41□□□□□ -2.02
RNF135Q8IUD6 Y_RNA.264-201ENST00000364665 102 ntBASIC2.4□□□□□ -2.03
RNF135Q8IUD6 Y_RNA.491-201ENST00000384417 107 ntBASIC2.4□□□□□ -2.03
RNF135Q8IUD6 U8.13-201ENST00000390842 128 ntBASIC2.4□□□□□ -2.03
RNF135Q8IUD6 RNU6-205P-201ENST00000390858 107 ntBASIC2.4□□□□□ -2.03
RNF135Q8IUD6 RNU6-1254P-201ENST00000391266 104 ntBASIC2.4□□□□□ -2.03
RNF135Q8IUD6 AL133373.1-201ENST00000497098 94 ntBASIC2.4□□□□□ -2.03
RNF135Q8IUD6 AL161722.3-201ENST00000605789 2983 ntBASIC2.4□□□□□ -2.03
RNF135Q8IUD6 MIR664A-201ENST00000626086 82 ntBASIC2.4□□□□□ -2.03
RNF135Q8IUD6 MIR219B-201ENST00000637023 88 ntBASIC2.4□□□□□ -2.03
RNF135Q8IUD6 MIR30D-201ENST00000362283 70 ntBASIC2.39□□□□□ -2.03
RNF135Q8IUD6 RNU6-208P-201ENST00000362431 107 ntBASIC2.39□□□□□ -2.03
RNF135Q8IUD6 RNU6-649P-201ENST00000384463 107 ntBASIC2.39□□□□□ -2.03
RNF135Q8IUD6 MIR548U-201ENST00000390728 81 ntBASIC2.39□□□□□ -2.03
RNF135Q8IUD6 RNU6-243P-201ENST00000391140 107 ntBASIC2.39□□□□□ -2.03
RNF135Q8IUD6 RNU6-587P-201ENST00000391282 106 ntBASIC2.39□□□□□ -2.03
RNF135Q8IUD6 RNU6-1165P-201ENST00000410119 107 ntBASIC2.39□□□□□ -2.03
RNF135Q8IUD6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RNF135Q8IUD6 RNU7-62P-201ENST00000458856 62 ntBASIC2.39□□□□□ -2.03
RNF135Q8IUD6 SNORA44.1-201ENST00000517031 108 ntBASIC2.39□□□□□ -2.03
RNF135Q8IUD6 AP003716.2-201ENST00000528260 108 ntBASIC2.39□□□□□ -2.03
RNF135Q8IUD6 AL137847.3-201ENST00000611521 109 ntBASIC2.39□□□□□ -2.03
RNF135Q8IUD6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
RNF135Q8IUD6 RNU5F-1-201ENST00000362507 117 ntBASIC2.38□□□□□ -2.03
RNF135Q8IUD6 Y_RNA.355-201ENST00000365462 98 ntBASIC2.38□□□□□ -2.03
RNF135Q8IUD6 MIR676-201ENST00000390702 67 ntBASIC2.38□□□□□ -2.03
RNF135Q8IUD6 AC015818.7-201ENST00000428754 109 ntBASIC2.38□□□□□ -2.03
RNF135Q8IUD6 RNU6-303P-201ENST00000517091 106 ntBASIC2.38□□□□□ -2.03
RNF135Q8IUD6 SNORD92-201ENST00000585078 85 ntBASIC2.38□□□□□ -2.03
RNF135Q8IUD6 AC103810.8-201ENST00000607347 118 ntBASIC2.38□□□□□ -2.03
RNF135Q8IUD6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
RNF135Q8IUD6 AL596028.1-201ENST00000326971 197 ntBASIC2.37□□□□□ -2.03
RNF135Q8IUD6 RNU6-466P-201ENST00000391224 103 ntBASIC2.37□□□□□ -2.03
RNF135Q8IUD6 AC074348.1-201ENST00000426503 132 ntBASIC2.37□□□□□ -2.03
RNF135Q8IUD6 RNU11-2P-201ENST00000516898 142 ntBASIC2.37□□□□□ -2.03
RNF135Q8IUD6 MIR5007-201ENST00000583098 95 ntBASIC2.37□□□□□ -2.03
RNF135Q8IUD6 MIR6516-201ENST00000630554 81 ntBASIC2.37□□□□□ -2.03
RNF135Q8IUD6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RNF135Q8IUD6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RNF135Q8IUD6 MIR103A2-201ENST00000362154 78 ntBASIC2.36□□□□□ -2.03
RNF135Q8IUD6 MIRLET7F1-201ENST00000362202 87 ntBASIC2.36□□□□□ -2.03
RNF135Q8IUD6 MIR302D-201ENST00000362275 68 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 262.3 ms