Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 RNY1P6-201ENST00000384193 109 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 RNU6-476P-201ENST00000384726 107 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 SNORA79-201ENST00000408376 140 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 RNU6-732P-201ENST00000516033 103 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 RNU6-358P-201ENST00000516564 75 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 MIR5690-201ENST00000583739 73 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 MIR5704-201ENST00000584029 77 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 AC006006.1-201ENST00000603082 144 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 AC009779.6-201ENST00000603972 165 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 AC090582.1-201ENST00000636321 199 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 RNU6-937P-201ENST00000384325 106 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 AL669831.3-213ENST00000636676 183 ntBASIC-1.64□□□□□ -2.67
USP54Q70EL1 RNU4-10P-201ENST00000364383 140 ntBASIC-1.65□□□□□ -2.67
USP54Q70EL1 MIR516A2-201ENST00000384888 90 ntBASIC-1.65□□□□□ -2.67
USP54Q70EL1 MIR516A1-201ENST00000385033 90 ntBASIC-1.65□□□□□ -2.67
USP54Q70EL1 SNORA49-201ENST00000386157 136 ntBASIC-1.65□□□□□ -2.67
USP54Q70EL1 RNA5SP144-201ENST00000410846 116 ntBASIC-1.65□□□□□ -2.67
USP54Q70EL1 MTND1P1-201ENST00000445453 368 ntBASIC-1.65□□□□□ -2.67
USP54Q70EL1 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.65□□□□□ -2.67
USP54Q70EL1 RNY4P7-201ENST00000364600 96 ntBASIC-1.66□□□□□ -2.68
USP54Q70EL1 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.66□□□□□ -2.68
USP54Q70EL1 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.66□□□□□ -2.68
USP54Q70EL1 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.66□□□□□ -2.68
USP54Q70EL1 MIR548F5-201ENST00000408421 86 ntBASIC-1.66□□□□□ -2.68
USP54Q70EL1 AC096644.2-201ENST00000429278 159 ntBASIC-1.66□□□□□ -2.68
USP54Q70EL1 AL365205.2-201ENST00000594586 68 ntBASIC-1.66□□□□□ -2.68
USP54Q70EL1 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 AC133104.2-201ENST00000615272 193 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 AC138305.3-201ENST00000624988 240 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 SNORA32-201ENST00000384072 121 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 SNORA51.5-201ENST00000384126 131 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 RNU6-571P-201ENST00000384128 107 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 MIR206-201ENST00000384872 86 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 AC099799.1-201ENST00000439809 192 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 PART1_1.1-201ENST00000611761 217 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 AC048344.4-201ENST00000619744 527 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 AP001362.1-201ENST00000625165 124 ntBASIC-1.67□□□□□ -2.68
USP54Q70EL1 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.68□□□□□ -2.68
USP54Q70EL1 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.68□□□□□ -2.68
USP54Q70EL1 SNORD115-35-201ENST00000365122 82 ntBASIC-1.68□□□□□ -2.68
USP54Q70EL1 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.68□□□□□ -2.68
USP54Q70EL1 RNU6-880P-201ENST00000384526 107 ntBASIC-1.68□□□□□ -2.68
USP54Q70EL1 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.68□□□□□ -2.68
USP54Q70EL1 SCARNA15-202ENST00000516881 127 ntBASIC-1.68□□□□□ -2.68
USP54Q70EL1 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.68□□□□□ -2.68
USP54Q70EL1 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.69□□□□□ -2.68
USP54Q70EL1 SNORD114-17-201ENST00000364699 75 ntBASIC-1.7□□□□□ -2.68
USP54Q70EL1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.7□□□□□ -2.68
USP54Q70EL1 RPS29P30-201ENST00000600975 111 ntBASIC-1.7□□□□□ -2.68
USP54Q70EL1 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.71□□□□□ -2.68
USP54Q70EL1 RNU6-570P-201ENST00000517051 105 ntBASIC-1.71□□□□□ -2.68
USP54Q70EL1 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.71□□□□□ -2.68
USP54Q70EL1 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.71□□□□□ -2.68
USP54Q70EL1 AL353813.1-201ENST00000440700 253 ntBASIC-1.71□□□□□ -2.68
USP54Q70EL1 AC109635.3-201ENST00000529536 185 ntBASIC-1.71□□□□□ -2.68
USP54Q70EL1 snoU18.1-201ENST00000629629 71 ntBASIC-1.71□□□□□ -2.68
USP54Q70EL1 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.72□□□□□ -2.68
USP54Q70EL1 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.72□□□□□ -2.68
USP54Q70EL1 RNU6-540P-201ENST00000384622 101 ntBASIC-1.72□□□□□ -2.68
USP54Q70EL1 MIR124-2-201ENST00000385081 109 ntBASIC-1.72□□□□□ -2.68
USP54Q70EL1 AL606845.1-201ENST00000404881 255 ntBASIC-1.72□□□□□ -2.68
USP54Q70EL1 AL731563.1-201ENST00000442202 214 ntBASIC-1.72□□□□□ -2.68
USP54Q70EL1 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.73□□□□□ -2.69
USP54Q70EL1 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.73□□□□□ -2.69
USP54Q70EL1 MIR4520-1-201ENST00000582609 70 ntBASIC-1.73□□□□□ -2.69
USP54Q70EL1 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.73□□□□□ -2.69
USP54Q70EL1 AL445584.3-201ENST00000617173 78 ntBASIC-1.73□□□□□ -2.69
USP54Q70EL1 U4.1-201ENST00000620349 87 ntBASIC-1.73□□□□□ -2.69
USP54Q70EL1 RNY4P14-201ENST00000363656 96 ntBASIC-1.74□□□□□ -2.69
USP54Q70EL1 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.74□□□□□ -2.69
USP54Q70EL1 RNU6-243P-201ENST00000391140 107 ntBASIC-1.74□□□□□ -2.69
USP54Q70EL1 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.74□□□□□ -2.69
USP54Q70EL1 MTND4LP30-201ENST00000454092 297 ntBASIC-1.74□□□□□ -2.69
USP54Q70EL1 RNU6-983P-201ENST00000516004 103 ntBASIC-1.74□□□□□ -2.69
USP54Q70EL1 RNU6-850P-201ENST00000516934 103 ntBASIC-1.74□□□□□ -2.69
USP54Q70EL1 SNORD36A-201ENST00000362874 73 ntBASIC-1.74□□□□□ -2.69
USP54Q70EL1 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.74□□□□□ -2.69
USP54Q70EL1 SNORA62.4-201ENST00000365504 151 ntBASIC-1.74□□□□□ -2.69
USP54Q70EL1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.74□□□□□ -2.69
USP54Q70EL1 YWHAEP3-201ENST00000582767 121 ntBASIC-1.74□□□□□ -2.69
USP54Q70EL1 MIR548AE2-201ENST00000583456 67 ntBASIC-1.74□□□□□ -2.69
USP54Q70EL1 MIR548O2-201ENST00000616090 70 ntBASIC-1.74□□□□□ -2.69
USP54Q70EL1 AC132825.6-201ENST00000638861 357 ntBASIC-1.74□□□□□ -2.69
USP54Q70EL1 RNU6-664P-201ENST00000362381 107 ntBASIC-1.75□□□□□ -2.69
USP54Q70EL1 RNU4-90P-201ENST00000362773 141 ntBASIC-1.75□□□□□ -2.69
USP54Q70EL1 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.75□□□□□ -2.69
USP54Q70EL1 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.75□□□□□ -2.69
USP54Q70EL1 MIR181A1-201ENST00000385026 110 ntBASIC-1.75□□□□□ -2.69
USP54Q70EL1 MIR624-201ENST00000385217 97 ntBASIC-1.75□□□□□ -2.69
USP54Q70EL1 RNU4-69P-201ENST00000410677 143 ntBASIC-1.75□□□□□ -2.69
USP54Q70EL1 RNU7-2P-201ENST00000516096 62 ntBASIC-1.75□□□□□ -2.69
USP54Q70EL1 RNU6-506P-201ENST00000516553 94 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 226.3 ms