Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 Y_RNA.466-201ENST00000384294 113 ntBASIC0.75□□□□□ -2.29
SYNE3Q6ZMZ3 AC002350.1-201ENST00000490759 375 ntBASIC0.75□□□□□ -2.29
SYNE3Q6ZMZ3 RNU6-448P-201ENST00000517052 107 ntBASIC0.75□□□□□ -2.29
SYNE3Q6ZMZ3 MIR3612-201ENST00000579753 87 ntBASIC0.75□□□□□ -2.29
SYNE3Q6ZMZ3 MIR4714-201ENST00000580728 77 ntBASIC0.75□□□□□ -2.29
SYNE3Q6ZMZ3 MT-TI-201ENST00000387365 69 ntBASIC0.74□□□□□ -2.29
SYNE3Q6ZMZ3 AL589743.1-201ENST00000551932 2712 ntBASIC0.74□□□□□ -2.29
SYNE3Q6ZMZ3 MIR18A-201ENST00000362310 71 ntBASIC0.73□□□□□ -2.29
SYNE3Q6ZMZ3 SNORD58C-201ENST00000365223 64 ntBASIC0.73□□□□□ -2.29
SYNE3Q6ZMZ3 MIR539-201ENST00000365690 78 ntBASIC0.73□□□□□ -2.29
SYNE3Q6ZMZ3 SNORD77B-201ENST00000391112 67 ntBASIC0.73□□□□□ -2.29
SYNE3Q6ZMZ3 RNU6-733P-201ENST00000410759 104 ntBASIC0.73□□□□□ -2.29
SYNE3Q6ZMZ3 AC138749.4-201ENST00000563970 127 ntBASIC0.73□□□□□ -2.29
SYNE3Q6ZMZ3 MIR3163-201ENST00000581592 73 ntBASIC0.73□□□□□ -2.29
SYNE3Q6ZMZ3 MIR3133-201ENST00000583157 78 ntBASIC0.73□□□□□ -2.29
SYNE3Q6ZMZ3 AC087741.2-201ENST00000619415 172 ntBASIC0.73□□□□□ -2.29
SYNE3Q6ZMZ3 RNY1P2-201ENST00000364820 117 ntBASIC0.72□□□□□ -2.29
SYNE3Q6ZMZ3 MIR206-201ENST00000384872 86 ntBASIC0.72□□□□□ -2.29
SYNE3Q6ZMZ3 RNU6-781P-201ENST00000516377 101 ntBASIC0.72□□□□□ -2.29
SYNE3Q6ZMZ3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.72□□□□□ -2.29
SYNE3Q6ZMZ3 Y_RNA.213-201ENST00000364178 111 ntBASIC0.71□□□□□ -2.3
SYNE3Q6ZMZ3 SNORA25.16-201ENST00000516741 121 ntBASIC0.71□□□□□ -2.3
SYNE3Q6ZMZ3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6-403P-201ENST00000363163 104 ntBASIC0.7□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6-704P-201ENST00000364162 103 ntBASIC0.7□□□□□ -2.3
SYNE3Q6ZMZ3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.7□□□□□ -2.3
SYNE3Q6ZMZ3 uc_338.16-201ENST00000621804 95 ntBASIC0.7□□□□□ -2.3
SYNE3Q6ZMZ3 RNA5SP133-201ENST00000363368 119 ntBASIC0.69□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6-1321P-201ENST00000390905 107 ntBASIC0.69□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6-772P-201ENST00000516042 105 ntBASIC0.69□□□□□ -2.3
SYNE3Q6ZMZ3 U6.109-201ENST00000636749 87 ntBASIC0.69□□□□□ -2.3
SYNE3Q6ZMZ3 RNU4-58P-201ENST00000363192 141 ntBASIC0.68□□□□□ -2.3
SYNE3Q6ZMZ3 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
SYNE3Q6ZMZ3 MIR140-201ENST00000385282 100 ntBASIC0.68□□□□□ -2.3
SYNE3Q6ZMZ3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.68□□□□□ -2.3
SYNE3Q6ZMZ3 RNU7-2P-201ENST00000516096 62 ntBASIC0.68□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6-1234P-201ENST00000516877 103 ntBASIC0.68□□□□□ -2.3
SYNE3Q6ZMZ3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.67□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6-235P-201ENST00000362644 107 ntBASIC0.67□□□□□ -2.3
SYNE3Q6ZMZ3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.67□□□□□ -2.3
SYNE3Q6ZMZ3 SNORD115-35-201ENST00000365122 82 ntBASIC0.67□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6-80P-201ENST00000384195 107 ntBASIC0.67□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6-616P-201ENST00000384353 107 ntBASIC0.67□□□□□ -2.3
SYNE3Q6ZMZ3 Y_RNA.528-201ENST00000384575 108 ntBASIC0.67□□□□□ -2.3
SYNE3Q6ZMZ3 Y_RNA.536-201ENST00000384621 113 ntBASIC0.67□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6-291P-201ENST00000384720 107 ntBASIC0.67□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6-1307P-201ENST00000391012 103 ntBASIC0.67□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.67□□□□□ -2.3
SYNE3Q6ZMZ3 RNA5SP222-201ENST00000411039 105 ntBASIC0.67□□□□□ -2.3
SYNE3Q6ZMZ3 Y_RNA.712-201ENST00000517011 92 ntBASIC0.67□□□□□ -2.3
SYNE3Q6ZMZ3 AC025166.1-201ENST00000612411 163 ntBASIC0.67□□□□□ -2.3
SYNE3Q6ZMZ3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.67□□□□□ -2.3
SYNE3Q6ZMZ3 RNY1P8-201ENST00000383970 114 ntBASIC0.66□□□□□ -2.3
SYNE3Q6ZMZ3 SNORA72.6-201ENST00000384520 129 ntBASIC0.66□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6-429P-201ENST00000384582 108 ntBASIC0.66□□□□□ -2.3
SYNE3Q6ZMZ3 MIR1263-201ENST00000408324 86 ntBASIC0.66□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6-735P-201ENST00000410612 107 ntBASIC0.66□□□□□ -2.3
SYNE3Q6ZMZ3 RNU7-48P-201ENST00000458875 63 ntBASIC0.66□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6-531P-201ENST00000516694 104 ntBASIC0.66□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6-135P-201ENST00000516769 101 ntBASIC0.66□□□□□ -2.3
SYNE3Q6ZMZ3 RNA5SP480-201ENST00000516840 109 ntBASIC0.66□□□□□ -2.3
SYNE3Q6ZMZ3 RNU6-971P-201ENST00000516920 106 ntBASIC0.66□□□□□ -2.3
SYNE3Q6ZMZ3 Y_RNA.32-201ENST00000362589 110 ntBASIC0.65□□□□□ -2.31
SYNE3Q6ZMZ3 RNU6-774P-201ENST00000363238 107 ntBASIC0.65□□□□□ -2.31
SYNE3Q6ZMZ3 Y_RNA.218-201ENST00000364218 104 ntBASIC0.65□□□□□ -2.31
SYNE3Q6ZMZ3 RNU6-187P-201ENST00000384139 106 ntBASIC0.65□□□□□ -2.31
SYNE3Q6ZMZ3 Y_RNA.448-201ENST00000384185 108 ntBASIC0.65□□□□□ -2.31
SYNE3Q6ZMZ3 MIR548D2-201ENST00000384955 97 ntBASIC0.65□□□□□ -2.31
SYNE3Q6ZMZ3 RNU7-6P-201ENST00000516845 62 ntBASIC0.65□□□□□ -2.31
SYNE3Q6ZMZ3 AC105081.1-201ENST00000617727 106 ntBASIC0.65□□□□□ -2.31
SYNE3Q6ZMZ3 Y_RNA.119-201ENST00000363301 96 ntBASIC0.64□□□□□ -2.31
SYNE3Q6ZMZ3 Y_RNA.127-201ENST00000363386 109 ntBASIC0.64□□□□□ -2.31
SYNE3Q6ZMZ3 SNORD114-26-201ENST00000363543 72 ntBASIC0.64□□□□□ -2.31
SYNE3Q6ZMZ3 RNA5SP117-201ENST00000365294 118 ntBASIC0.64□□□□□ -2.31
SYNE3Q6ZMZ3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.64□□□□□ -2.31
SYNE3Q6ZMZ3 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
SYNE3Q6ZMZ3 MTND5P34-201ENST00000568888 325 ntBASIC0.64□□□□□ -2.31
SYNE3Q6ZMZ3 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
SYNE3Q6ZMZ3 AP001362.1-201ENST00000625165 124 ntBASIC0.64□□□□□ -2.31
SYNE3Q6ZMZ3 MIR3914-2-201ENST00000637339 95 ntBASIC0.64□□□□□ -2.31
SYNE3Q6ZMZ3 MTND5P18-201ENST00000445624 1801 ntBASIC0.64□□□□□ -2.31
SYNE3Q6ZMZ3 Y_RNA.98-201ENST00000363109 102 ntBASIC0.63□□□□□ -2.31
SYNE3Q6ZMZ3 Y_RNA.346-201ENST00000365385 112 ntBASIC0.63□□□□□ -2.31
SYNE3Q6ZMZ3 MIR759-201ENST00000390224 91 ntBASIC0.63□□□□□ -2.31
SYNE3Q6ZMZ3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.63□□□□□ -2.31
SYNE3Q6ZMZ3 RNU6-1211P-201ENST00000459179 105 ntBASIC0.63□□□□□ -2.31
SYNE3Q6ZMZ3 RN7SKP12-201ENST00000516275 143 ntBASIC0.63□□□□□ -2.31
SYNE3Q6ZMZ3 SNORA31.14-201ENST00000516728 116 ntBASIC0.63□□□□□ -2.31
SYNE3Q6ZMZ3 Y_RNA.697-201ENST00000516776 113 ntBASIC0.63□□□□□ -2.31
SYNE3Q6ZMZ3 Y_RNA.773-201ENST00000607168 90 ntBASIC0.63□□□□□ -2.31
SYNE3Q6ZMZ3 MIR6513-201ENST00000621188 64 ntBASIC0.63□□□□□ -2.31
SYNE3Q6ZMZ3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
SYNE3Q6ZMZ3 RNA5SP499-201ENST00000363982 119 ntBASIC0.62□□□□□ -2.31
SYNE3Q6ZMZ3 Y_RNA.328-201ENST00000365208 113 ntBASIC0.62□□□□□ -2.31
SYNE3Q6ZMZ3 MIR216A-201ENST00000385063 110 ntBASIC0.62□□□□□ -2.31
SYNE3Q6ZMZ3 MIR548M-201ENST00000408260 86 ntBASIC0.62□□□□□ -2.31
SYNE3Q6ZMZ3 Y_RNA.630-201ENST00000411370 108 ntBASIC0.62□□□□□ -2.31
SYNE3Q6ZMZ3 RNA5SP436-201ENST00000516020 115 ntBASIC0.62□□□□□ -2.31
SYNE3Q6ZMZ3 RNU6-659P-201ENST00000516454 104 ntBASIC0.62□□□□□ -2.31
SYNE3Q6ZMZ3 RNU6-1061P-201ENST00000516530 99 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 263.3 ms