Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RNU6-469P-201ENST00000516253 101 ntBASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 SNORD67.1-201ENST00000516618 108 ntBASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 Y_RNA.692-201ENST00000516627 105 ntBASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 SNORA25.16-201ENST00000516741 121 ntBASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 RNA5SP94-201ENST00000516917 108 ntBASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 MIR548X2-201ENST00000579776 100 ntBASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 AC098479.1-201ENST00000609225 154 ntBASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 uc_338.16-201ENST00000621804 95 ntBASIC0.39□□□□□ -2.35
RFWD3Q6PCD5 Y_RNA.8-201ENST00000362353 102 ntBASIC0.38□□□□□ -2.35
RFWD3Q6PCD5 Y_RNA.174-201ENST00000363781 105 ntBASIC0.38□□□□□ -2.35
RFWD3Q6PCD5 Y_RNA.536-201ENST00000384621 113 ntBASIC0.38□□□□□ -2.35
RFWD3Q6PCD5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
RFWD3Q6PCD5 DEFB131E-201ENST00000532329 154 ntBASIC0.38□□□□□ -2.35
RFWD3Q6PCD5 MIR3121-201ENST00000579680 77 ntBASIC0.38□□□□□ -2.35
RFWD3Q6PCD5 AC108081.1-201ENST00000604358 221 ntBASIC0.38□□□□□ -2.35
RFWD3Q6PCD5 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.38□□□□□ -2.35
RFWD3Q6PCD5 MIR924-201ENST00000638017 53 ntBASIC0.38□□□□□ -2.35
RFWD3Q6PCD5 RNU4-58P-201ENST00000363192 141 ntBASIC0.37□□□□□ -2.35
RFWD3Q6PCD5 RNA5SP133-201ENST00000363368 119 ntBASIC0.37□□□□□ -2.35
RFWD3Q6PCD5 RNU6-915P-201ENST00000364943 103 ntBASIC0.37□□□□□ -2.35
RFWD3Q6PCD5 Y_RNA.398-201ENST00000383952 99 ntBASIC0.37□□□□□ -2.35
RFWD3Q6PCD5 Y_RNA.400-201ENST00000383963 111 ntBASIC0.37□□□□□ -2.35
RFWD3Q6PCD5 MIR1270-201ENST00000459320 83 ntBASIC0.37□□□□□ -2.35
RFWD3Q6PCD5 SNORA25.12-201ENST00000516202 82 ntBASIC0.37□□□□□ -2.35
RFWD3Q6PCD5 RNY4P20-201ENST00000516678 93 ntBASIC0.37□□□□□ -2.35
RFWD3Q6PCD5 Y_RNA.697-201ENST00000516776 113 ntBASIC0.37□□□□□ -2.35
RFWD3Q6PCD5 AL359881.1-201ENST00000602916 267 ntBASIC0.37□□□□□ -2.35
RFWD3Q6PCD5 AP001340.1-201ENST00000624405 217 ntBASIC0.37□□□□□ -2.35
RFWD3Q6PCD5 U6.109-201ENST00000636749 87 ntBASIC0.37□□□□□ -2.35
RFWD3Q6PCD5 Y_RNA.32-201ENST00000362589 110 ntBASIC0.36□□□□□ -2.35
RFWD3Q6PCD5 RNA5SP517-201ENST00000364724 117 ntBASIC0.36□□□□□ -2.35
RFWD3Q6PCD5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
RFWD3Q6PCD5 Y_RNA.555-201ENST00000384673 110 ntBASIC0.36□□□□□ -2.35
RFWD3Q6PCD5 RNU6-291P-201ENST00000384720 107 ntBASIC0.36□□□□□ -2.35
RFWD3Q6PCD5 RNU6-535P-201ENST00000384722 107 ntBASIC0.36□□□□□ -2.35
RFWD3Q6PCD5 SNORD77B-201ENST00000391112 67 ntBASIC0.36□□□□□ -2.35
RFWD3Q6PCD5 AC108059.2-201ENST00000434626 151 ntBASIC0.36□□□□□ -2.35
RFWD3Q6PCD5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.36□□□□□ -2.35
RFWD3Q6PCD5 RNU6-531P-201ENST00000516694 104 ntBASIC0.36□□□□□ -2.35
RFWD3Q6PCD5 SNORA31.14-201ENST00000516728 116 ntBASIC0.36□□□□□ -2.35
RFWD3Q6PCD5 RNU6-135P-201ENST00000516769 101 ntBASIC0.36□□□□□ -2.35
RFWD3Q6PCD5 MTND5P34-201ENST00000568888 325 ntBASIC0.36□□□□□ -2.35
RFWD3Q6PCD5 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.36□□□□□ -2.35
RFWD3Q6PCD5 Y_RNA.567-201ENST00000384736 106 ntBASIC0.35□□□□□ -2.35
RFWD3Q6PCD5 MIR644A-201ENST00000385262 94 ntBASIC0.35□□□□□ -2.35
RFWD3Q6PCD5 SNORA40.8-201ENST00000411034 126 ntBASIC0.35□□□□□ -2.35
RFWD3Q6PCD5 SNORD71-201ENST00000411292 86 ntBASIC0.35□□□□□ -2.35
RFWD3Q6PCD5 AP001328.1-201ENST00000528550 176 ntBASIC0.35□□□□□ -2.35
RFWD3Q6PCD5 AC138749.4-201ENST00000563970 127 ntBASIC0.35□□□□□ -2.35
RFWD3Q6PCD5 MIR3671-201ENST00000580455 88 ntBASIC0.35□□□□□ -2.35
RFWD3Q6PCD5 Y_RNA.215-201ENST00000364204 112 ntBASIC0.34□□□□□ -2.36
RFWD3Q6PCD5 RNY1P2-201ENST00000364820 117 ntBASIC0.34□□□□□ -2.36
RFWD3Q6PCD5 MIR518A1-201ENST00000385068 85 ntBASIC0.34□□□□□ -2.36
RFWD3Q6PCD5 AC022523.2-201ENST00000561045 150 ntBASIC0.34□□□□□ -2.36
RFWD3Q6PCD5 AC105081.1-201ENST00000617727 106 ntBASIC0.34□□□□□ -2.36
RFWD3Q6PCD5 Y_RNA.119-201ENST00000363301 96 ntBASIC0.33□□□□□ -2.36
RFWD3Q6PCD5 RNA5SP457-201ENST00000363657 124 ntBASIC0.33□□□□□ -2.36
RFWD3Q6PCD5 Y_RNA.420-201ENST00000384043 110 ntBASIC0.33□□□□□ -2.36
RFWD3Q6PCD5 RNU6-1104P-201ENST00000384723 104 ntBASIC0.33□□□□□ -2.36
RFWD3Q6PCD5 MIR569-201ENST00000385228 96 ntBASIC0.33□□□□□ -2.36
RFWD3Q6PCD5 MIRLET7F2-201ENST00000385277 83 ntBASIC0.33□□□□□ -2.36
RFWD3Q6PCD5 MIR8087-201ENST00000612745 78 ntBASIC0.33□□□□□ -2.36
RFWD3Q6PCD5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.33□□□□□ -2.36
RFWD3Q6PCD5 MIR101-2-201ENST00000362195 79 ntBASIC0.32□□□□□ -2.36
RFWD3Q6PCD5 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
RFWD3Q6PCD5 Y_RNA.114-201ENST00000363265 113 ntBASIC0.32□□□□□ -2.36
RFWD3Q6PCD5 Y_RNA.115-201ENST00000363272 98 ntBASIC0.32□□□□□ -2.36
RFWD3Q6PCD5 SNORD118-201ENST00000363593 134 ntBASIC0.32□□□□□ -2.36
RFWD3Q6PCD5 Y_RNA.180-201ENST00000363867 113 ntBASIC0.32□□□□□ -2.36
RFWD3Q6PCD5 RNU6-647P-201ENST00000364243 107 ntBASIC0.32□□□□□ -2.36
RFWD3Q6PCD5 Y_RNA.464-201ENST00000384282 110 ntBASIC0.32□□□□□ -2.36
RFWD3Q6PCD5 SNORA8.2-201ENST00000384372 139 ntBASIC0.32□□□□□ -2.36
RFWD3Q6PCD5 MIR206-201ENST00000384872 86 ntBASIC0.32□□□□□ -2.36
RFWD3Q6PCD5 RNU6-1321P-201ENST00000390905 107 ntBASIC0.32□□□□□ -2.36
RFWD3Q6PCD5 RNA5SP330-201ENST00000517096 96 ntBASIC0.32□□□□□ -2.36
RFWD3Q6PCD5 MTND5P41-201ENST00000517498 206 ntBASIC0.32□□□□□ -2.36
RFWD3Q6PCD5 AC021753.1-201ENST00000635724 168 ntBASIC0.32□□□□□ -2.36
RFWD3Q6PCD5 AC090625.1-201ENST00000357130 210 ntBASIC0.31□□□□□ -2.36
RFWD3Q6PCD5 MIR330-201ENST00000362196 94 ntBASIC0.31□□□□□ -2.36
RFWD3Q6PCD5 Y_RNA.56-201ENST00000362798 112 ntBASIC0.31□□□□□ -2.36
RFWD3Q6PCD5 SNORA36.1-201ENST00000363424 132 ntBASIC0.31□□□□□ -2.36
RFWD3Q6PCD5 RNU6-1229P-201ENST00000364295 107 ntBASIC0.31□□□□□ -2.36
RFWD3Q6PCD5 RNU6-716P-201ENST00000365621 103 ntBASIC0.31□□□□□ -2.36
RFWD3Q6PCD5 RNU6-429P-201ENST00000384582 108 ntBASIC0.31□□□□□ -2.36
RFWD3Q6PCD5 RN7SKP19-201ENST00000516016 252 ntBASIC0.31□□□□□ -2.36
RFWD3Q6PCD5 IGKV1-22-201ENST00000524313 326 ntBASIC0.31□□□□□ -2.36
RFWD3Q6PCD5 MIR4639-201ENST00000584938 69 ntBASIC0.31□□□□□ -2.36
RFWD3Q6PCD5 SNORA25.18-201ENST00000607153 114 ntBASIC0.31□□□□□ -2.36
RFWD3Q6PCD5 U7.2-201ENST00000607576 63 ntBASIC0.31□□□□□ -2.36
RFWD3Q6PCD5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.31□□□□□ -2.36
RFWD3Q6PCD5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
RFWD3Q6PCD5 MIR103A1-201ENST00000362165 78 ntBASIC0.3□□□□□ -2.36
RFWD3Q6PCD5 Y_RNA.258-201ENST00000364613 105 ntBASIC0.3□□□□□ -2.36
RFWD3Q6PCD5 Y_RNA.280-201ENST00000364765 112 ntBASIC0.3□□□□□ -2.36
RFWD3Q6PCD5 Y_RNA.448-201ENST00000384185 108 ntBASIC0.3□□□□□ -2.36
RFWD3Q6PCD5 Y_RNA.488-201ENST00000384403 102 ntBASIC0.3□□□□□ -2.36
RFWD3Q6PCD5 SNORD28-201ENST00000384706 75 ntBASIC0.3□□□□□ -2.36
RFWD3Q6PCD5 RNU7-48P-201ENST00000458875 63 ntBASIC0.3□□□□□ -2.36
RFWD3Q6PCD5 RNU7-2P-201ENST00000516096 62 ntBASIC0.3□□□□□ -2.36
RFWD3Q6PCD5 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms